Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000399A_C01 KCC000399A_c01
(628 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_610437.1| CG8181-PA [Drosophila melanogaster] gi|7303964|... 41 0.016
ref|NP_666173.3| Rho GTPase activating protein 8 [Mus musculus] ... 40 0.028
ref|ZP_00013455.1| hypothetical protein [Rhodospirillum rubrum] 40 0.028
ref|NP_148981.1| vesicle associated protein [Rattus norvegicus] ... 40 0.036
gb|AAH24991.1| Arhgap8 protein [Mus musculus] 38 0.14
>ref|NP_610437.1| CG8181-PA [Drosophila melanogaster] gi|7303964|gb|AAF59007.1|
CG8181-PA [Drosophila melanogaster]
Length = 746
Score = 40.8 bits (94), Expect = 0.016
Identities = 34/95 (35%), Positives = 43/95 (44%)
Frame = +1
Query: 262 PWYRRQPTVRSACPHPPPISSSGLLVHGITVPRTTPKQTRKTTTMTPCGATQSFLVDTPY 441
P ++++ T + H P SS V T +TT T TTT T S T
Sbjct: 205 PTHQQETTTTTTRRHTRPTGSSS--VASRTTSKTTTTTTTTTTTTAAPPTTTSTRAATTT 262
Query: 442 SRPTSCLRTKNTSKHGTSHSPTRLYAPSHPPYHTT 546
RPT LRT TSK +HS +R AP+ P TT
Sbjct: 263 QRPTPPLRT-TTSKPHKTHS-SRRPAPAKKPVSTT 295
>ref|NP_666173.3| Rho GTPase activating protein 8 [Mus musculus]
gi|28372472|gb|AAO39849.1|AF482997_1 putative Rho GTPase
activating protein gene 8 [Mus musculus]
Length = 387
Score = 40.0 bits (92), Expect = 0.028
Identities = 28/87 (32%), Positives = 38/87 (43%)
Frame = +1
Query: 274 RQPTVRSACPHPPPISSSGLLVHGITVPRTTPKQTRKTTTMTPCGATQSFLVDTPYSRPT 453
+ P VRS + P ++ T T + + MT C Q F VDTP +RP
Sbjct: 247 KNPVVRSKSYNTPLLNPVAEHEAEGTAASGTSIRRHSVSEMTSCPEPQGF-VDTPATRPF 305
Query: 454 SCLRTKNTSKHGTSHSPTRLYAPSHPP 534
R+ T G P+RLY P+H P
Sbjct: 306 GTFRSSPTPHSGPC--PSRLYPPAHSP 330
>ref|ZP_00013455.1| hypothetical protein [Rhodospirillum rubrum]
Length = 236
Score = 40.0 bits (92), Expect = 0.028
Identities = 26/80 (32%), Positives = 37/80 (45%), Gaps = 10/80 (12%)
Frame = +1
Query: 313 PISSSGLLVHGITVPRTTPKQTRKTTTMTPCGATQSF----LVDTPYSRPTSCLRTKNT- 477
P ++ G+ +TVP TP + TTT+TP + S+ V T YS PT + T
Sbjct: 68 PTTAEGVHYRSVTVPSATPGYSTTTTTITPLPSNPSYAPPPTVGTGYSAPTGSMGYSTTT 127
Query: 478 -----SKHGTSHSPTRLYAP 522
+ T +PT YAP
Sbjct: 128 TTIAPAPAPTGANPTVTYAP 147
>ref|NP_148981.1| vesicle associated protein [Rattus norvegicus] gi|7514116|pir||T14150
vesicle associated protein 1 - rat
gi|4104321|gb|AAD01990.1| vesicle associated protein
[Rattus norvegicus]
Length = 1249
Score = 39.7 bits (91), Expect = 0.036
Identities = 46/143 (32%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Frame = +2
Query: 227 GRAASPLLIGLSPGTGGSLPSDPPAHTHRPSVAQVSLYMASRYHAPPRNRRV---KQLP* 397
G S L PGT G+ PPA + P+ + + ++ PP RV K+LP
Sbjct: 988 GAPPSSSAYALPPGTTGT----PPAASELPASQRTG--PQNGWNDPPALNRVPKKKKLPE 1041
Query: 398 ---PHVGQLSPSWLTRPTADPHP--------ASGPKTHQNMAHHTAPHACTLQAIHLTIR 544
P V SP + P DP P ASGP++ A PH Q H +
Sbjct: 1042 NFMPPVPITSP--IMNPGGDPQPQGLQQQPSASGPRSSH--ASFPQPHLAGGQPFHGIQQ 1097
Query: 545 PLALTGPTPGWRCAVIRQGAPGA 613
PLA TG P + +GAPGA
Sbjct: 1098 PLAQTGMPPSF-SKPNTEGAPGA 1119
>gb|AAH24991.1| Arhgap8 protein [Mus musculus]
Length = 378
Score = 37.7 bits (86), Expect = 0.14
Identities = 27/87 (31%), Positives = 37/87 (42%)
Frame = +1
Query: 274 RQPTVRSACPHPPPISSSGLLVHGITVPRTTPKQTRKTTTMTPCGATQSFLVDTPYSRPT 453
+ P VRS + P ++ T T + + MT C Q F VDTP P+
Sbjct: 238 KNPVVRSKSYNTPLLNPVAEHEAEGTAASGTSIRRHSVSEMTSCPEPQGF-VDTPGQGPS 296
Query: 454 SCLRTKNTSKHGTSHSPTRLYAPSHPP 534
R+ T G P+RLY P+H P
Sbjct: 297 GTFRSSPTPHSGPC--PSRLYPPAHSP 321
