Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000388A_C01 KCC000388A_c01
(576 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_648825.1| CG5830-PA [Drosophila melanogaster] gi|23093405... 72 7e-12
gb|AAQ22453.1| RE52350p [Drosophila melanogaster] 70 2e-11
ref|XP_317884.1| ENSANGP00000019946 [Anopheles gambiae] gi|21300... 65 5e-10
ref|NP_598471.1| RIKEN cDNA 2810418J22 [Mus musculus] gi|1786550... 65 7e-10
ref|NP_872580.1| nuclear LIM interactor-interacting factor; smal... 65 9e-10
>ref|NP_648825.1| CG5830-PA [Drosophila melanogaster] gi|23093405|gb|AAF49553.2|
CG5830-PA [Drosophila melanogaster]
Length = 329
Score = 71.6 bits (174), Expect = 7e-12
Identities = 49/123 (39%), Positives = 67/123 (53%), Gaps = 5/123 (4%)
Frame = +1
Query: 223 VDVSSVITQVTSVTAHRPVAPFRVAQQP-----QPKSWRRRFRSLLCCFAPQSQGYFRHA 387
+D +S+ITQV+ V P + +P+ R F SLLCC+ + +
Sbjct: 1 MDATSIITQVSRDDEQLNVYPSYPNDKDDVDRLKPQK-RGLFHSLLCCWR---RNRTKTN 56
Query: 388 QDGEYSGGRFVPPQPPKVHREQLIGPKRSDDHSKKTLVLDLDETLVHSSFKPIPNPDYIL 567
Q+G G PP P R L + +D H +K +V+DLDETLVHSSFKPIPN D+I+
Sbjct: 57 QNGTQIDGSTTPPPLPDQQRYLLPQVRLTDMH-RKCMVIDLDETLVHSSFKPIPNADFIV 115
Query: 568 PVE 576
PVE
Sbjct: 116 PVE 118
>gb|AAQ22453.1| RE52350p [Drosophila melanogaster]
Length = 329
Score = 70.5 bits (171), Expect = 2e-11
Identities = 49/123 (39%), Positives = 66/123 (52%), Gaps = 5/123 (4%)
Frame = +1
Query: 223 VDVSSVITQVTSVTAHRPVAPFRVAQQP-----QPKSWRRRFRSLLCCFAPQSQGYFRHA 387
+D +S+ITQV V P + +P+ R F SLLCC+ + +
Sbjct: 1 MDATSIITQVFRDDEQLNVYPSYPNDKDDVDRLKPQK-RGLFHSLLCCWR---RNRTKTN 56
Query: 388 QDGEYSGGRFVPPQPPKVHREQLIGPKRSDDHSKKTLVLDLDETLVHSSFKPIPNPDYIL 567
Q+G G PP P R L + +D H +K +V+DLDETLVHSSFKPIPN D+I+
Sbjct: 57 QNGTQIDGSTTPPPLPDQQRYLLPQVRLTDMH-RKCMVIDLDETLVHSSFKPIPNADFIV 115
Query: 568 PVE 576
PVE
Sbjct: 116 PVE 118
>ref|XP_317884.1| ENSANGP00000019946 [Anopheles gambiae] gi|21300943|gb|EAA13088.1|
ENSANGP00000019946 [Anopheles gambiae str. PEST]
Length = 274
Score = 65.5 bits (158), Expect = 5e-10
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = +1
Query: 337 SLLCCFAPQSQGYFRHAQDGEYSGGRFVPPQPPKVHREQLIGPKRSDDHSKKTLVLDLDE 516
+L CC+ G + Q G G PP P + L+ R D KK +V+DLDE
Sbjct: 16 TLFCCWR---NGRTKSNQSGTPIDGSITPP-PIQGQPRYLLPQVRPSDTYKKCMVIDLDE 71
Query: 517 TLVHSSFKPIPNPDYILPVE 576
TLVHSSFKPIPN D+I+PVE
Sbjct: 72 TLVHSSFKPIPNADFIVPVE 91
>ref|NP_598471.1| RIKEN cDNA 2810418J22 [Mus musculus]
gi|17865505|sp|P58465|NIF1_MOUSE Nuclear LIM
interactor-interacting factor 1 (NLI-interacting factor
1) (NIF-like protein)
Length = 348
Score = 65.1 bits (157), Expect = 7e-10
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 22/149 (14%)
Frame = +1
Query: 196 PGAPEKP--SVVDVSSVITQVTSVT---AHRPVAPFRVAQQP---QPKSWRRRFRSLLCC 351
PG P P + +D ++ITQVT+ A PVA + +Q+ + + R S CC
Sbjct: 62 PGLPRPPRRAPMDGPAIITQVTNPKEDEARSPVAGEKASQRNISLKKERGRSILSSFFCC 121
Query: 352 F------APQSQGYFRHAQDGEYSGG-------RFVP-PQPPKVHREQLIGPKRSDDHSK 489
F AP + E +GG + +P P PP + L+ D+ K
Sbjct: 122 FRDYNVEAPPANSPSVLPPLVEENGGLQKGDQRQVIPVPSPPAKY---LLPEVTVLDYGK 178
Query: 490 KTLVLDLDETLVHSSFKPIPNPDYILPVE 576
K +V+DLDETLVHSSFKPI N D+I+PVE
Sbjct: 179 KCVVIDLDETLVHSSFKPISNADFIVPVE 207
>ref|NP_872580.1| nuclear LIM interactor-interacting factor; small CTD phosphatase 1
[Homo sapiens] gi|31074175|gb|AAP34397.1| small CTD
phosphatase 1 [Homo sapiens]
Length = 260
Score = 64.7 bits (156), Expect = 9e-10
Identities = 46/128 (35%), Positives = 66/128 (50%), Gaps = 10/128 (7%)
Frame = +1
Query: 223 VDVSSVITQVTSVTAHRPV---APFRVAQQPQPKSWRRRFRSLLCCFAPQSQGYFRHAQD 393
+D S+VITQ++ A P+ + A +P+S R SL CC D
Sbjct: 1 MDSSAVITQISKEEARGPLRGKGDQKSAASQKPRS-RGILHSLFCCVC---------RDD 50
Query: 394 GE----YSGGRFVPPQP---PKVHREQLIGPKRSDDHSKKTLVLDLDETLVHSSFKPIPN 552
GE +SG + + PK + L+ ++ D K +V+DLDETLVHSSFKP+ N
Sbjct: 51 GEALPAHSGAPLLVEENGAIPKTPVQYLLPEAKAQDSDKICVVIDLDETLVHSSFKPVNN 110
Query: 553 PDYILPVE 576
D+I+PVE
Sbjct: 111 ADFIIPVE 118
