Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000385A_C01 KCC000385A_c01
(430 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA65910.1| UL8 [Pseudorabies virus] 37 0.063
ref|NP_473387.1| differentially expressed in FDCP 8 [Mus musculu... 35 0.18
dbj|BAC34239.1| unnamed protein product [Mus musculus] 35 0.18
pir||T03460 probable leucine/isoleucine/valine-binding protein p... 35 0.24
dbj|BAC38184.1| unnamed protein product [Mus musculus] 35 0.24
>emb|CAA65910.1| UL8 [Pseudorabies virus]
Length = 683
Score = 37.0 bits (84), Expect = 0.063
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 RVESCLLPQRGIRAYHRLLALG-ISVGLSLHLEHWTAGSTATACH*QCLLNGALVAR 255
R+ L P G RA+H ALG +S GL L + W AG +A C L GA +A+
Sbjct: 322 RLTDGLWPALGFRAFH---ALGPVSCGLRLRCDVWPAGRATSAVEHPCALRGAWLAK 375
>ref|NP_473387.1| differentially expressed in FDCP 8 [Mus musculus]
gi|13097039|gb|AAH03306.1| Def8 protein [Mus musculus]
gi|26329625|dbj|BAC28551.1| unnamed protein product [Mus
musculus] gi|26352738|dbj|BAC39999.1| unnamed protein
product [Mus musculus]
Length = 448
Score = 35.4 bits (80), Expect = 0.18
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Frame = -3
Query: 401 ITTPSTCAGTCVSKHVLCRNMCAGTCVRTRVSRMT------------PSKD--CSGC--- 273
I T TC G C H C N+ + CV ++VS S+D C+ C
Sbjct: 161 IQTWYTCTGCCYRCHSKCLNLISKPCVSSKVSHQAEYELNICPETGLDSQDYRCAECRAP 220
Query: 272 -------AHVHERRATRAPFSKHC*WQAVAVDPAVQCSRCSDRPTEMPRASSR*YARM 120
+ + T + HC W +AV PA P ++ R S R A M
Sbjct: 221 ISLRGVPSEARQCDYTGQYYCSHCHWNDLAVIPARVVHNWDFEPRKVSRCSMRYLALM 278
>dbj|BAC34239.1| unnamed protein product [Mus musculus]
Length = 460
Score = 35.4 bits (80), Expect = 0.18
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Frame = -3
Query: 401 ITTPSTCAGTCVSKHVLCRNMCAGTCVRTRVSRMT------------PSKD--CSGC--- 273
I T TC G C H C N+ + CV ++VS S+D C+ C
Sbjct: 173 IQTWYTCTGCCYRCHSKCLNLISKPCVSSKVSHQAEYELNICPETGLDSQDYRCAECRAP 232
Query: 272 -------AHVHERRATRAPFSKHC*WQAVAVDPAVQCSRCSDRPTEMPRASSR*YARM 120
+ + T + HC W +AV PA P ++ R S R A M
Sbjct: 233 ISLRGVPSEARQCDYTGQYYCSHCHWNDLAVIPARVVHNWDFEPRKVSRCSMRYLALM 290
>pir||T03460 probable leucine/isoleucine/valine-binding protein precursor -
Rhodobacter capsulatus gi|3128261|gb|AAC16113.1|
potential leu/ile/val-binding protein precursor
[Rhodobacter capsulatus]
Length = 400
Score = 35.0 bits (79), Expect = 0.24
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Frame = -1
Query: 256 AGLQEHHLASIVSGRRLQLTRLSSVRDVVTGRQRCREQAVGDMHECLVGAVGT-----IQ 92
A +E + A V GR+L+L + T +R R G+ H L+GAVGT Q
Sbjct: 62 AAFEEANRAGGVLGRKLRLEAFDDGYEPETSAERTRAVIAGNAHLALIGAVGTPTSQATQ 121
Query: 91 LVGVAGCLSITGDPATGR-----PKLRS 23
+ A L G P TG PKLR+
Sbjct: 122 PLAEAAGLPFIG-PFTGAAFLRDPKLRN 148
>dbj|BAC38184.1| unnamed protein product [Mus musculus]
Length = 448
Score = 35.0 bits (79), Expect = 0.24
Identities = 31/118 (26%), Positives = 42/118 (35%), Gaps = 24/118 (20%)
Frame = -3
Query: 401 ITTPSTCAGTCVSKHVLCRNMCAGTCVRTRVSRMT------------PSKD--CSGC--- 273
I T TC G C H C N+ + CV ++VS S+D C+ C
Sbjct: 161 IQTWYTCTGCCYRCHSKCLNLISKPCVSSKVSHQAEYELNICPETGLDSQDYRCAECRAP 220
Query: 272 -------AHVHERRATRAPFSKHC*WQAVAVDPAVQCSRCSDRPTEMPRASSR*YARM 120
+ T + HC W +AV PA P ++ R S R A M
Sbjct: 221 ISLRGVPGEARQCDYTGQYYCSHCHWNDLAVIPARVVHNWDFEPRKVSRCSMRYLALM 278
