Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000380A_C01 KCC000380A_c01
(1306 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00004621.1| COG0449: Glucosamine 6-phosphate synthetase, ... 64 6e-09
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ... 54 6e-06
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 54 8e-06
pir||D34768 ORF4 protein - Orf virus (strain NZ2) gi|332566|gb|A... 54 8e-06
gb|AAO65338.1| unknown [Streptomyces murayamaensis] 52 3e-05
>ref|ZP_00004621.1| COG0449: Glucosamine 6-phosphate synthetase, contains
amidotransferase and phosphosugar isomerase domains
[Rhodobacter sphaeroides]
Length = 901
Score = 63.9 bits (154), Expect = 6e-09
Identities = 66/197 (33%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Frame = -1
Query: 640 LSLGLDERPAHEQARGHGNNVGARACEEARAGAGSGRAH--------AGNIPQHLGQVVV 485
L G D R H +A G G G R G G AH A ++P+
Sbjct: 63 LRRGRDARCEHPRATGRGRG-GIPETRPRRGARGRGHAHRARHGLLRARHVPRARRH--- 118
Query: 484 QGLELGLVRRRLRHGRATVERTARGRRAGVGRSRRLHALARGRLLLLGRRGPRRALGRRG 305
G E GL R RHGR RGR + SRRL LARG L PRR GR
Sbjct: 119 SGAERGL--RTRRHGRI------RGRDPRLLPSRRLPHLARGHGRPLRAPAPRRGTGRGR 170
Query: 304 SVGLGRQRQRGRIRE-----------IKGCQLADLHRLGHGRARLRHRNKAVHQLRRIAL 158
+ G R+ Q R R + C A HR GHG +LR ++A + RR L
Sbjct: 171 ACGQLRRDQECRARRGGEGGPPHLSRRRPCGRAYEHRRGHGHLQLRWGDEAPDRDRRPCL 230
Query: 157 ELVGHHRASSGAGHYAR 107
+GH +G G AR
Sbjct: 231 HRLGHDAGGAGHGGGAR 247
Score = 38.5 bits (88), Expect = 0.27
Identities = 40/110 (36%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Frame = -1
Query: 463 VRRRLRHGRATVERTARGRRAGVGRSRRLHALARGRLLLLGRRGP---RRALGRRGSVGL 293
+RR LR G A+ R G G+ + RGR+L RRGP RALGRRG +
Sbjct: 16 LRRHLRRGGASPRP-----RLGSGQCQ-----CRGRILPDRRRGPCPRPRALGRRGDLRR 65
Query: 292 GRQ----------RQRGRIREIKGCQLA----DLHRLGHGRARLRHRNKA 185
GR R RG I E + + A HR HG R RH +A
Sbjct: 66 GRDARCEHPRATGRGRGGIPETRPRRGARGRGHAHRARHGLLRARHVPRA 115
>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
[Azotobacter vinelandii]
Length = 1336
Score = 53.9 bits (128), Expect = 6e-06
Identities = 67/208 (32%), Positives = 78/208 (37%), Gaps = 7/208 (3%)
Frame = -3
Query: 725 PGRSGSAAAGWEEVRRVRADLPCDARLVLEFRP*RAPGP*AGSWAWEQRRGSGLRRSQGR 546
PG SG+ AG R R R + RP PGP W +RR R G
Sbjct: 125 PG-SGTRRAGPPSRRLTR-----QRRAAAKTRP-SQPGP-VTPWVRARRRQRYRPRGSGG 176
Query: 545 RGERPSACREHSAAPWPGRRPGTGTWPGSQKASPWPRDRRENRARETSRSWAKPSPSRA- 369
RP AP P RRP GS+ SP P R R T+RS P P RA
Sbjct: 177 SPHRP--------APVPARRPPARARTGSRSPSPPPAGRSPGAWRRTARSSPPPRPCRAS 228
Query: 368 -GPRPPSAAWAARSAASAWEARVGWPWAPAAAGAHPRNQRVSARGPSSARPWPGAPETPQ 192
G R PSAA R+ S + P A A A P + R P+ P A +
Sbjct: 229 VGLRCPSAAGPDRARPSDSPPPLPGPVARTPASAPPGPPATTRRPPAGRAPKATAASWRR 288
Query: 191 *GG-----PPAPTNRP*TCGAPQSKQRR 123
G P T R C P+S RR
Sbjct: 289 TGRWPCAMPGTATGRAARC--PRSPPRR 314
Score = 39.7 bits (91), Expect = 0.12
Identities = 63/221 (28%), Positives = 76/221 (33%), Gaps = 71/221 (32%)
Frame = -3
Query: 584 QRRGSGLRRSQGRRGERPSACREHSAAPWPGR---------------------------- 489
++ G GL R GRR RP + PW GR
Sbjct: 72 RQTGVGLLRP-GRRPARPGS-------PWSGRTRRTGLAGGGFRPAAQPDAGLQLDGVRR 123
Query: 488 RPGTGT---WPGSQK------------------ASPWPRDRREN--RARETSRSWAKPSP 378
PG+GT P S++ +PW R RR R R + S +P+P
Sbjct: 124 HPGSGTRRAGPPSRRLTRQRRAAAKTRPSQPGPVTPWVRARRRQRYRPRGSGGSPHRPAP 183
Query: 377 ---------SRAGPRPPSAAWAARSAASAWE--ARVGWPWAPAAAGAHPRNQRVSARGPS 231
+R G R PS A RS AW AR P P A R SA GP
Sbjct: 184 VPARRPPARARTGSRSPSPPPAGRS-PGAWRRTARSSPPPRPCRASVGLRCP--SAAGPD 240
Query: 230 SARPWPGAPETP---------Q*GGPPAPTNRP*TCGAPQS 135
ARP P P GPPA T RP AP++
Sbjct: 241 RARPSDSPPPLPGPVARTPASAPPGPPATTRRPPAGRAPKA 281
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 53.5 bits (127), Expect = 8e-06
Identities = 63/197 (31%), Positives = 74/197 (36%), Gaps = 8/197 (4%)
Frame = -3
Query: 725 PGRSGSAAAGWEEVRRVRADLPCDARLVLEFRP*RAPGP*AGSWAWEQRRGSGLRRSQGR 546
P +AA+G R A P AR PG G +R G R G
Sbjct: 139 PAAPAAAASGPRPGARPGAPKPGGARPA-------TPGQGQGGQVRGERTDRGDR---GD 188
Query: 545 RGERPSACREHSAAPWPGRRPGTGTWPGSQKASPWPRDRRENRAR-ETSRSWAKPSPSRA 369
RG+R A R AP PG RP G PG+ +P+ AR + R P P A
Sbjct: 189 RGDRQGAARPGGQAPRPGARP-AGPRPGN---NPFTSGGSTGMARPQAPRPGGAPRPGGA 244
Query: 368 ----GPRPPSAAWAARSAASAWEARVGWPWAPAAAGAHPRNQRVSARGPSSARPWPGA-- 207
GPRP A R+ P G PR Q GP ARP PG
Sbjct: 245 GAPGGPRPQGAGGQDRA-----------PRPQGGPGGAPRPQ----GGPGGARPTPGGMP 289
Query: 206 -PETPQ*GGPPAPTNRP 159
P+ P+ GG P NRP
Sbjct: 290 RPQAPRPGGAPG-GNRP 305
Score = 42.7 bits (99), Expect = 0.014
Identities = 43/155 (27%), Positives = 56/155 (35%), Gaps = 18/155 (11%)
Frame = -3
Query: 536 RPSACREHSAAPWPGRRPGTGTWPGSQKASPWPRDRRENRARETSRSWAKPSPSRAGPRP 357
RP+A R + P RP P + A+P PR + R A P+P+
Sbjct: 78 RPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAP---AAPAPAAPEFTA 134
Query: 356 PSAAWAARSAASAWEARVGWPWAPAAAGAHP----RNQRVSARG--------------PS 231
P +A AA +AA++ P AP GA P + Q RG
Sbjct: 135 PPSAPAAPAAAASGPRPGARPGAPKPGGARPATPGQGQGGQVRGERTDRGDRGDRGDRQG 194
Query: 230 SARPWPGAPETPQ*GGPPAPTNRP*TCGAPQSKQR 126
+ARP AP P P N P T G R
Sbjct: 195 AARPGGQAPRPGARPAGPRPGNNPFTSGGSTGMAR 229
>pir||D34768 ORF4 protein - Orf virus (strain NZ2) gi|332566|gb|AAA46790.1| ORF4
Length = 264
Score = 53.5 bits (127), Expect = 8e-06
Identities = 49/138 (35%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Frame = -3
Query: 620 APGP*AGSWAWEQRRGSGLRRSQGRRGERPSA--CREHSAAPWPGRRPGTGTWPGSQKAS 447
APGP G GLRR+ GR G P+A +AA R P + P +++ +
Sbjct: 141 APGP-----------GQGLRRAPGRAGRYPAARPAAASAAASRRHRGPAARSSPAAERPA 189
Query: 446 PWPRDRRE---NRARETSRSWAKPSPSRAGPRPPSAAWAARSAASAWEARVGWPWAPAAA 276
P PR R E R +S S A P R SAA +R AAS AR APAA+
Sbjct: 190 P-PRARAEAAAPRRASSSGSRASSGPPRRSAARSSAASGSRPAASGPAAR-----APAAS 243
Query: 275 GAHPRNQRVSARGPSSAR 222
A +ARGP + R
Sbjct: 244 SARTSAGEGAARGPGAPR 261
Score = 36.2 bits (82), Expect = 1.3
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +2
Query: 134 CSVVPHKFKGDSSELVDRLIAVSQARPAMAEPMKVRELTPFDFADAPPLPLAPKANRPSP 313
CSV P +G R ARPA A R P +P A RP+P
Sbjct: 138 CSVAPGPGQG-LRRAPGRAGRYPAARPAAASAAASRRHR------GPAARSSPAAERPAP 190
Query: 314 PKRSPRTSPPKQQKAASGQRV-----KATASPNSCSSPSRGSLDGRAAMAKPSANQAK 472
P+ + P+ + ++SG R + +A+ +S +S SR + G AA A P+A+ A+
Sbjct: 191 PRARAEAAAPR-RASSSGSRASSGPPRRSAARSSAASGSRPAASGPAARA-PAASSAR 246
>gb|AAO65338.1| unknown [Streptomyces murayamaensis]
Length = 810
Score = 51.6 bits (122), Expect = 3e-05
Identities = 40/123 (32%), Positives = 48/123 (38%), Gaps = 12/123 (9%)
Frame = -3
Query: 494 GRRPGTGTW----PGSQKASPWPRDRRENRARETSRSWAKPSPSRAGPRPPSAAWAARSA 327
G TG+W P S + SP P R N WA PS R P ++ A +
Sbjct: 693 GLGDATGSWAIRAPPSNR-SPAPPSWRVN--------WATPSARRTRCSPSASRTATSAT 743
Query: 326 ASA-WEARVGWPWAPAAAGAHPRNQRVSARGPSSARPWPG-------APETPQ*GGPPAP 171
ASA W GWP +P A R+ + R PS PW AP P PPA
Sbjct: 744 ASARWRGPTGWPRSPRRAATRSRSPAPATRAPSRCSPWAAGRRPPRRAPRRPAPIAPPAV 803
Query: 170 TNR 162
R
Sbjct: 804 RKR 806
