Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000373A_C01 KCC000373A_c01
(828 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00075178.1| COG1219: ATP-dependent protease Clp, ATPase s... 62 1e-08
ref|ZP_00072782.1| COG1219: ATP-dependent protease Clp, ATPase s... 62 1e-08
ref|ZP_00015172.1| COG1219: ATP-dependent protease Clp, ATPase s... 61 2e-08
ref|ZP_00135115.1| COG1219: ATP-dependent protease Clp, ATPase s... 61 3e-08
ref|NP_420768.1| ATP-dependent Clp protease, ATP-binding subunit... 60 4e-08
>ref|ZP_00075178.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Trichodesmium
erythraeum IMS101]
Length = 327
Score = 62.0 bits (149), Expect = 1e-08
Identities = 36/88 (40%), Positives = 52/88 (58%), Gaps = 2/88 (2%)
Frame = +2
Query: 416 QPSSMEAAPAVPQFGGQTINTTTAHQWGIRRVPSPRELVRALDAHVIGQEHAKKVLAVAT 595
QP APA PQ G T + I ++P PRE+ LDAHVIGQE KKVL+VA
Sbjct: 35 QPPIPRPAPA-PQKRG-----TGTKRLSISQIPKPREIKNYLDAHVIGQEEGKKVLSVAV 88
Query: 596 HNHYKRI--MSTRRNRRDDTNGVQMHES 673
+NHYKR+ + +++ + + V++ +S
Sbjct: 89 YNHYKRLSFLEAKKSGKSSQDEVELQKS 116
>ref|ZP_00072782.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Trichodesmium
erythraeum IMS101]
Length = 449
Score = 62.0 bits (149), Expect = 1e-08
Identities = 36/88 (40%), Positives = 52/88 (58%), Gaps = 2/88 (2%)
Frame = +2
Query: 416 QPSSMEAAPAVPQFGGQTINTTTAHQWGIRRVPSPRELVRALDAHVIGQEHAKKVLAVAT 595
QP APA PQ G T + I ++P PRE+ LDAHVIGQE KKVL+VA
Sbjct: 56 QPPIPRPAPA-PQKRG-----TGTKRLSISQIPKPREIKNYLDAHVIGQEEGKKVLSVAV 109
Query: 596 HNHYKRI--MSTRRNRRDDTNGVQMHES 673
+NHYKR+ + +++ + + V++ +S
Sbjct: 110 YNHYKRLSFLEAKKSGKSSQDEVELQKS 137
>ref|ZP_00015172.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Rhodospirillum
rubrum]
Length = 422
Score = 61.2 bits (147), Expect = 2e-08
Identities = 25/42 (59%), Positives = 35/42 (82%)
Frame = +2
Query: 509 VPSPRELVRALDAHVIGQEHAKKVLAVATHNHYKRIMSTRRN 634
VPSP+++++ LD +VIGQ+HAKKVL+VA HNHYKR+ +N
Sbjct: 63 VPSPKDILKVLDDYVIGQQHAKKVLSVAVHNHYKRLSQAGKN 104
>ref|ZP_00135115.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 419
Score = 60.8 bits (146), Expect = 3e-08
Identities = 29/55 (52%), Positives = 41/55 (73%)
Frame = +2
Query: 509 VPSPRELVRALDAHVIGQEHAKKVLAVATHNHYKRIMSTRRNRRDDTNGVQMHES 673
VP+P E+ LD +VIGQEHAKKVL+VA +NHYKR+ + + +TNGV++ +S
Sbjct: 64 VPTPHEINAHLDEYVIGQEHAKKVLSVAVYNHYKRLRNALSGHK-ETNGVELGKS 117
>ref|NP_420768.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15] gi|6225165|sp|O87708|CLPX_CAUCR
ATP-dependent Clp protease ATP-binding subunit clpX
gi|25296050|pir||D87492 hypothetical protein CC1961
[imported] - Caulobacter crescentus
gi|3688207|emb|CAA09092.1| clpX protein [Caulobacter
vibrioides] gi|13423422|gb|AAK23936.1| ATP-dependent Clp
protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15]
Length = 420
Score = 60.1 bits (144), Expect = 4e-08
Identities = 27/42 (64%), Positives = 32/42 (75%)
Frame = +2
Query: 509 VPSPRELVRALDAHVIGQEHAKKVLAVATHNHYKRIMSTRRN 634
VP+PRE+ LD +VIGQ HAKKVLAVA HNHYKR+ +N
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHASKN 104
