Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000368A_C01 KCC000368A_c01
(957 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 46 0.001
gb|AAD42858.1|AF159693_1 serine/threonine kinase PKN13 [Myxococc... 44 0.003
pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 ... 44 0.005
gb|AAD09141.1| myosin I heavy chain kinase [Acanthamoeba castell... 44 0.005
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ... 42 0.012
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 45.8 bits (107), Expect = 0.001
Identities = 40/131 (30%), Positives = 50/131 (37%), Gaps = 12/131 (9%)
Frame = -2
Query: 932 PLHRLPPAPAAHGARAPTPEQPRPAG--------PTGA*SLMVPPGSLSAGRSSWAQSAP 777
P H PP P PTP P PAG PT + + PP + R AP
Sbjct: 159 PQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARP--GSPAP 216
Query: 776 VVEPSLLAARLPAARTAPISS-VPWRSSGSHHTPQMGA---GWREGTPGAQSQQAASSAG 609
P+ P A AP ++ P + G+ + GA G R G+P A A A
Sbjct: 217 AATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGAT 276
Query: 608 P*PPERHTPRP 576
P P TP P
Sbjct: 277 PAPTT--TPAP 285
Score = 43.9 bits (102), Expect = 0.004
Identities = 48/149 (32%), Positives = 58/149 (38%), Gaps = 8/149 (5%)
Frame = -2
Query: 914 PAPAAHGARAPTPEQPRPAGPTGA*SLMVPPGSLSAGRSSWAQSAPVVEP-SLLAARLPA 738
PAPAA A PTP PT + PG+ AGR P V P S AA P
Sbjct: 214 PAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPG--APPPGVRPGSPPAAGSPP 271
Query: 737 ARTAPISSVPWRSSGSHHTPQMGAGWREGTPGAQSQQAASSAGP*PPERHTPRPCR*GWL 558
A A + + G TP G TP + A +A P P TP P R G
Sbjct: 272 APGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPG-- 329
Query: 557 RRAEPSPELRG-------VASAFPFHPPR 492
A P+P +G A+ P PP+
Sbjct: 330 --AGPTPGPQGGTPPAGAPAAGTPAAPPQ 356
Score = 32.7 bits (73), Expect = 9.3
Identities = 42/156 (26%), Positives = 51/156 (31%)
Frame = -2
Query: 908 PAAHGARAPTPEQPRPAGPTGA*SLMVPPGSLSAGRSSWAQSAPVVEPSLLAARLPAART 729
P AP RPA P A + PP + + +AP P PAAR
Sbjct: 52 PKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPP-----PPAARP 106
Query: 728 APISSVPWRSSGSHHTPQMGAGWREGTPGAQSQQAASSAGP*PPERHTPRPCR*GWLRRA 549
AP P ++ +P P A QQ A + P P P P
Sbjct: 107 APPPPPPPPAAPKQPSP---------PPAAAPQQHAPTPPPPAPPAARPAP--------T 149
Query: 548 EPSPELRGVASAFPFHPPR*TRR*TPRQTAQDPPQA 441
P+P P PP R TP T PP A
Sbjct: 150 PPAPPPAAAPQHAPPPPPPPAARPTP--TPPPPPPA 183
Score = 32.7 bits (73), Expect = 9.3
Identities = 45/163 (27%), Positives = 53/163 (31%), Gaps = 4/163 (2%)
Frame = -2
Query: 917 PPAPAAHGARAPTPEQPRPAGPTGA*SLMVPPGSLSAGRSSWAQSAPVVEPSLLAARLPA 738
PP PAA A P P P PA P P +A A + P P PA
Sbjct: 99 PPPPAARPA--PPPPPPPPAAP------KQPSPPPAAAPQQHAPTPPPPAP-------PA 143
Query: 737 ARTAPISSVPWRSSGSHHTPQMGAGWREGTPGAQSQQAASSAGP*PP----ERHTPRPCR 570
AR AP P ++ H P P + + + P PP R TP P
Sbjct: 144 ARPAPTPPAPPPAAAPQHAPP--------PPPPPAARPTPTPPPPPPAGPAARPTPAPTA 195
Query: 569 *GWLRRAEPSPELRGVASAFPFHPPR*TRR*TPRQTAQDPPQA 441
P+ S P P T TP TA P A
Sbjct: 196 TPTPVAPPPAAPTARPGSPAPAATPAPTP--TPAPTATPAPTA 236
>gb|AAD42858.1|AF159693_1 serine/threonine kinase PKN13 [Myxococcus xanthus]
Length = 935
Score = 44.3 bits (103), Expect = 0.003
Identities = 56/205 (27%), Positives = 74/205 (35%), Gaps = 34/205 (16%)
Frame = -2
Query: 920 LPPAPAAHG-----ARAPTPEQPRPAGPTGA*S--------LMVPPGSLSAGRSSWAQSA 780
LPPAP A G A +P P +P P + L PPG A R+S A +
Sbjct: 358 LPPAPRASGTPRNAAPSPAPRRPTTGAPAASPEAGTVRKAVLQAPPGKRLASRASPADAH 417
Query: 779 PVVEPSLLAARLPAARTAPISSVPWRSSGS-HHT-----PQMG--AGWREGTPGAQSQQA 624
P A LP + + + P + S HT P G AG TPG S +
Sbjct: 418 APPPPPAEATTLPPSGGQHVRTQPGMPAHSPEHTVRTQLPGTGRDAGASASTPGEASSRQ 477
Query: 623 ASSAGP*PPERHTPRPCR*GWLRRAE-PSPELRGVASAFPFHPP------------R*TR 483
S A + + +R E P+P G + A P P R +R
Sbjct: 478 GSRASAADAQAADREQTQVRGVRSPESPAPPAPGDSRARPIRTPDTLPAADDAHRARSSR 537
Query: 482 R*TPRQTAQDPPQARH*SECHQQAP 408
P D P+ R S H+ AP
Sbjct: 538 ATEPTPAGDDAPRTRS-SRAHEPAP 561
>pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 (strain F)
gi|330123|gb|AAA45794.1| infected cell protein
Length = 358
Score = 43.5 bits (101), Expect = 0.005
Identities = 77/289 (26%), Positives = 98/289 (33%), Gaps = 6/289 (2%)
Frame = -2
Query: 920 LPPAPAA--HGA--RAPTPEQPRPAGPTGA*SLMVPPGSLSAGRSSWAQSAPVVEPSLLA 753
LPP A HG R P +PRP GPTGA VP +S S P V + A
Sbjct: 7 LPPRHALCLHGPPRRHAGPRRPRPPGPTGA----VPTAQPQV--TSTPNSEPAVRSAPAA 60
Query: 752 ARLPAARTAPISSVPWRSSGSHHTPQMGAGWREGT--PGAQSQQAASSAGP*PPERHTPR 579
A P + P S H P+ + + P + + A AG P PR
Sbjct: 61 APPPPPASGPPPSCSLLLRQWLHVPESASDDDDDDDWPDSPPPEPAPEAG---PPAAAPR 117
Query: 578 PCR*GWLRRAEPSPELRGVASAFPFHPPR*TRR*TPRQTAQDPPQARH*SECHQQAPFLS 399
P P P A P HPP R PR + A H + + A
Sbjct: 118 P--------RSPPPGAGPGGGANPSHPPSRPFRLPPRLALRLRVTAEHLARLRRDARAGG 169
Query: 398 GA*LSLH*A*RATRAAPTSAGELYHV*RGSV*CICVQGLLTMAGEGCQVVVKESAGRAMG 219
GA A AT A P + + + +VV SA R
Sbjct: 170 GAGAPATPATPATPATPATPATPATPATPATPATPARVRSRPTVRVRHLVVWASAARLRA 229
Query: 218 SERKPGNGSTLLRPGGAVLPSRLITNCSWGDA*VPSP*SFRSFLPSPAR 72
+ R P +G T L G R + +WG P P R+ PAR
Sbjct: 230 AARGPASGPTGLGSGAGWRRPRRSSGRAWG----PGP--CRALPAGPAR 272
>gb|AAD09141.1| myosin I heavy chain kinase [Acanthamoeba castellanii]
gi|4206769|gb|AAD11799.1| myosin I heavy chain kinase
[Acanthamoeba castellanii]
Length = 753
Score = 43.5 bits (101), Expect = 0.005
Identities = 42/146 (28%), Positives = 53/146 (35%), Gaps = 24/146 (16%)
Frame = -2
Query: 935 VPLHRLPP---APAAHGARAPTPEQPRPAGPTGA*SLMVP---PGSLSAGRSSWAQSAP- 777
+PL R PP AP GA P P QP P P VP PG + GR + S P
Sbjct: 311 LPLTRGPPGGGAPRGPGAPPPRPGQPAPMRPGQPGGQGVPPPRPGQPAPGRPTMRPSQPG 370
Query: 776 -----------------VVEPSLLAARLPAARTAPISSVPWRSSGSHHTPQMGAGWREGT 648
V P+ + PA AP + P + TP + G R
Sbjct: 371 GPPRPPMPAPVPTTPTAAVTPAPVPVPAPAPAPAPADTTP-AAGPPRPTPPIATGARPAP 429
Query: 647 PGAQSQQAASSAGP*PPERHTPRPCR 570
P Q +A + PP P+P R
Sbjct: 430 PRPQPPKAGGA----PPPAAAPQPAR 451
Score = 33.9 bits (76), Expect = 4.2
Identities = 43/161 (26%), Positives = 48/161 (29%), Gaps = 31/161 (19%)
Frame = -2
Query: 953 PXRRQRVPLHRLPPAPAAHGARAPTPEQPR-----------------PAGPTGA*SLMVP 825
P R +P PP A GA P P +P P P+ +L P
Sbjct: 211 PPRPISLPPGARPPVQVAPGADLPVPPRPNQPPPMRGRGGPMRRGAPPGRPSPGRTLPPP 270
Query: 824 PGSLSAGRSSWA-------QSAPVVEPSLLA-------ARLPAARTAPISSVPWRSSGSH 687
PG AG AP P L A LP R P P
Sbjct: 271 PGGAPAGPGPTTGRGLPPRPGAPNGAPMPLQRGGASGDAPLPLTRGPPGGGAPRGPGAPP 330
Query: 686 HTPQMGAGWREGTPGAQSQQAASSAGP*PPERHTPRPCR*G 564
P A R G PG Q P P R T RP + G
Sbjct: 331 PRPGQPAPMRPGQPGGQGVPPPRPGQP-APGRPTMRPSQPG 370
>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
[Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
elegans RSR-1 protein (corresponding sequence F28D9.1)
[Caenorhabditis elegans]
Length = 601
Score = 42.4 bits (98), Expect = 0.012
Identities = 47/182 (25%), Positives = 71/182 (38%)
Frame = -2
Query: 953 PXRRQRVPLHRLPPAPAAHGARAPTPEQPRPAGPTGA*SLMVPPGSLSAGRSSWAQSAPV 774
P RR+R P PAP +R+ +P P + + S PP A S
Sbjct: 316 PARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS------- 368
Query: 773 VEPSLLAARLPAARTAPISSVPWRSSGSHHTPQMGAGWREGTPGAQSQQAASSAGP*PPE 594
P R P+A +P + RS +P A RE P + + ++S P P+
Sbjct: 369 KSPPARRRRSPSASKSPPAPRRRRSPSKSRSP---APKREIPPARRRRSPSASKSPPAPK 425
Query: 593 RHTPRPCR*GWLRRAEPSPELRGVASAFPFHPPR*TRR*TPRQTAQDPPQARH*SECHQQ 414
R R ++ P+P R S PR RR +P ++ Q P + R S +
Sbjct: 426 RAKSR-------SKSPPAPRRRRSPSQSKSPAPR--RRRSPSKSPQAPRRRRSPSGSKSR 476
Query: 413 AP 408
+P
Sbjct: 477 SP 478
