KCC000362A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000362A_C01 KCC000362A_c01
cccggacgcggcgtatctgttcggcttcccattctgccgctgctcggattaccggtgcgg
tgcggcgccctacaagatgcTGAAGGCGTCTGAGGAGACCCTGCCAAACGGCAACTACAA
AGTGTGCTTCAACTTCAACGACGTTGGCTGCCCGACCAACAACGCGTGCTGCACGTCTCT
GCTGCAGTCGGTCGGCAAGGTCGAGGTTCAGGCCGACAAGGCGTGCAAGGCGACGATCGC
CGCCTCGACCTTCGGTAACGTCAGCAAGGCTGGCAGCACGTTCTTTGATGACGAGTTCTC
TGTGGGCAAGGTCCGCATCACCGCCCTGAACGCCAACCGCCAGATGATGGACAACAGCCA
GCTGTGCCTCACCATCCGGCCTCCTTGCAACTCTTTTGACGTGTTCTTCCAGTCCAACAA
GGTCGGCGGCTCGGGGCTGTACCAGTACGCCCTCTTTAACAGCAAGGCGGACTGCTGCCC
TAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000362A_C01 KCC000362A_c01
         (483 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    55  3e-07
pir||T07907 hydroxyproline-rich glycoprotein GAS28 precursor - C...    51  8e-06
emb|CAD22154.1| pherophorin-dz1 protein [Volvox carteri f. nagar...    45  3e-04
sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)...    45  6e-04
prf||1604369A sulfated surface glycoprotein SSG185                     45  6e-04

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
           gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
           melanogaster]
          Length = 1225

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
 Frame = +3

Query: 102 CQTATTKCASTSTTLAARPTTRAARLCCSRSA--------RSRFRPTRRARRRSPPRPSV 257
           C   TT   ST+TT  +RPTT   R   + +         RS    T R    + PR + 
Sbjct: 217 CAQTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTT 276

Query: 258 TSARLAARSLMTSSLWARSASPP*TPTAR*WTTASCASPSGLL--ATLLTCSSSPTRSAA 431
           T++  A  +    S    + S P T T R  TT S  SP+     +T  T +S PT +  
Sbjct: 277 TTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTSTSRPTTTTP 336

Query: 432 RGCTSTPSLTARR 470
           R CT+TPS T  R
Sbjct: 337 R-CTTTPSTTCTR 348

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 46/154 (29%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
 Frame = +3

Query: 51  TGAVRRPTRC*RRLRRPCQTATTKCA-------STSTTLAARPTTRAARLCCSRSARSRF 209
           T    RPT    R    C T T+ C+       ST+TT  +RPTT   R   + S     
Sbjct: 293 TTTTSRPTTTTPR----CTTTTSTCSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTCTR 348

Query: 210 RPTRRARRRSPPRPSVTSARLAARSLMTSSLWARSASPP*TPTAR*WTTASCASPSGLL- 386
           RPT      + PR + T+      +    S      S P T T R  TT S + P+    
Sbjct: 349 RPT-----TTTPRSTTTTCTSGPTTTTPRSTTTTCTSGPTTTTPRSTTTTSTSGPTTTTP 403

Query: 387 -ATLLTCSSSPTRSAARGCTST----PSLTARRT 473
            +T  T +S PT +  R  T+T    P+ T  R+
Sbjct: 404 RSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 437

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
 Frame = +3

Query: 114  TTKCASTSTTLAARPTTRAARLCCSRSARSRFRPTRRARRRSPPRPSVTSARLAARSLMT 293
            TT   ST+TT  + PTT   R   S +  S   PT      + PR + T++     +   
Sbjct: 784  TTTPRSTTTTSTSGPTTTTPR---STTTTSTSGPTT-----TTPRSTTTTSTSGPTTTTP 835

Query: 294  SSLWARSASPP*TPTAR*WTTASCASPSGLL--ATLLTCSSSPT----RSAARGCTSTPS 455
             S    S S P T T R  TT S + P+     +T  TC+S PT    RS    CTS P+
Sbjct: 836  RSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPT 895

Query: 456  LTARRT 473
             T  R+
Sbjct: 896  TTTPRS 901

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
 Frame = +3

Query: 105  QTATTKCASTSTTLAARPTTRAARLCCSRSARSRFRPTRRARRRSPPRPSVTSARLAARS 284
            ++ TT C S  TT   R TT+ +  C   +   R   T    R +   P  T+    +R 
Sbjct: 916  RSTTTTCTSGPTTTTPRSTTKTS-TCAPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRP 974

Query: 285  LMTS--SLWARSASPP*TPTAR*WTTASCASPSGLL--ATLLTCSSSPTRSAARGCTST- 449
              T+  S    S S P T T R  TT S + P+     +T  T + +PT +  R  T+T 
Sbjct: 975  TTTTPRSTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTT 1034

Query: 450  ---PSLTARRT 473
               P+ T  R+
Sbjct: 1035 TSRPTTTTPRS 1045

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 40/130 (30%), Positives = 55/130 (41%), Gaps = 8/130 (6%)
 Frame = +3

Query: 102  CQTATTKCASTSTTLAARPTTRAAR----LCCSRSARSRFRPTRRARRRSP----PRPSV 257
            C T TT   ST+TT  + PTT   R     C S    +  R T +    +P    PR + 
Sbjct: 893  CPTTTTP-RSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRSTT 951

Query: 258  TSARLAARSLMTSSLWARSASPP*TPTAR*WTTASCASPSGLLATLLTCSSSPTRSAARG 437
            T++     +    S    + S P T T R  TT S + P     T  T  S+ T S +R 
Sbjct: 952  TTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRP-----TTTTPRSTTTTSTSRP 1006

Query: 438  CTSTPSLTAR 467
             T+TP  T +
Sbjct: 1007 TTTTPRSTTK 1016

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
 Frame = +3

Query: 114  TTKCASTSTTLAARPTTRAARLCCSRSARSRFRPTRRARRRSPPRPSVTSARLAARSLMT 293
            TT   ST+TT  + PTT   R   S +  S   PT      + PR + T+      +   
Sbjct: 832  TTTPRSTTTTSTSGPTTTTPR---STTTTSTSCPTT-----TTPRSTTTTCTSGPTTTTP 883

Query: 294  SSLWARSASPP*TPTAR*WTTA--SCASPSGLLATLLTCSSSPTRSAARGCTSTPSLTAR 467
             S      S P T T R  TT   SC + +   +T  TC+S PT +  R  T T +    
Sbjct: 884  RSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPT 943

Query: 468  RT 473
             T
Sbjct: 944  TT 945

 Score = 32.0 bits (71), Expect = 4.0
 Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 4/107 (3%)
 Frame = -2

Query: 314  GPCPQRTRHQRTCCQPC*RYRRSRRRSSPCTPCRPEPRPCRPTAAETCSTRCWSGSQRR* 135
            GP     R   T    C      R   S  T C   P    P +  T  T C + +  R 
Sbjct: 845  GPTTTTPRSTTTTSTSCPTTTTPR---STTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRS 901

Query: 134  S*STLCSCRLAGSPQTPSASCRAPHRTGNPSSGRMGS----RTDTPR 6
            + +T  SC    +P++ + +C +   T  P S    S     T TPR
Sbjct: 902  TTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPR 948

>pir||T07907 hydroxyproline-rich glycoprotein GAS28 precursor - Chlamydomonas
           reinhardtii gi|2384728|gb|AAB69862.1|
           hydroxyproline-rich glycoprotein gas28p precursor
           [Chlamydomonas reinhardtii]
          Length = 446

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 37/128 (28%), Positives = 62/128 (47%), Gaps = 3/128 (2%)
 Frame = +2

Query: 26  FPFCRCSDYRCGAAPYKMLKASEE-TLPNGNYKVCFN--FNDVGCPTNNACCTSLLQSVG 196
           FPFC+C     G+    M  AS   T+ NG  ++CFN    DV    N+ CC   L    
Sbjct: 285 FPFCQCQRNARGSR--LMTTASNNITVVNGLTRICFNVALKDVCENPNSKCCEFELY--- 339

Query: 197 KVEVQADKACKATIAASTFGNVSKAGSTFFDDEFSVGKVRITALNANRQMMDNSQLCLTI 376
           K+E++AD  C   +A ++    ++A   FF        ++IT ++     +D +++CL +
Sbjct: 340 KMEIEADPTCADALAYTSVDGATRA--KFFQTR-PYPVIKITNIDKPANTVDGTEVCLFM 396

Query: 377 RPPCNSFD 400
              CN+ +
Sbjct: 397 SSKCNTLE 404

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 42/152 (27%), Positives = 61/152 (39%), Gaps = 1/152 (0%)
 Frame = +2

Query: 29  PFCRCSDYRCGAAPYKMLKASEETLPNGNYKVCFNFNDVG-CPTNNACCTSLLQSVGKVE 205
           P C C +     +P++M    +     G Y  CF   +VG C     CC    Q V KVE
Sbjct: 71  PLCNC-ERNPRKSPFRM-SLDDAASAGGVY--CFTIQNVGGCDPTQKCCDGT-QGVSKVE 125

Query: 206 VQADKACKATIAASTFGNVSKAGSTFFDDEFSVGKVRITALNANRQMMDNSQLCLTIRPP 385
           +    +CK ++   T     K  S  F+   SV  +R+T L         +++CL + P 
Sbjct: 126 LDVVASCKDSVRNVTVD--GKKWSYEFNTALSV--IRMTNLGKTASTAAGTEVCLALAPK 181

Query: 386 CNSFDVFFQSNKVGGSGLYQYALFNSKADCCP 481
                +    +   G   Y   LFN   DCCP
Sbjct: 182 SQCPGLAQLCSAGAGLCKYTSRLFNQDRDCCP 213

>emb|CAD22154.1| pherophorin-dz1 protein [Volvox carteri f. nagariensis]
          Length = 1009

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 38/164 (23%), Positives = 64/164 (38%), Gaps = 12/164 (7%)
 Frame = +2

Query: 26  FPFCRCSDYRCGAAPYKMLKASEETLPNGNYKVCFNFNDVGCPTNNACCTSLLQSVGKVE 205
           FPF  C+  + GA      + + E    G  K CF         NNACC++    + K+E
Sbjct: 46  FPFRECAS-KIGA-----YRLAPEVKMYGGGKYCFTIKVQTQGCNNACCST---DLFKIE 96

Query: 206 VQADKACKATIAASTFGNVSKAGSTF-------FDDEFSVGKVRITALNANRQMMDNSQL 364
                +C  T AA     ++   +T         +       +R+T L+       +++L
Sbjct: 97  FNVSDSCLVTPAAEVKATINGRPTTVGAAYDRPINGRAGTAILRLTRLDLTLATAADAEL 156

Query: 365 CLTIR-----PPCNSFDVFFQSNKVGGSGLYQYALFNSKADCCP 481
           CLT++       C + D    +      G    AL+++   CCP
Sbjct: 157 CLTLKANRQGKGCTTLDQMCATQPGAMKGTCTAALYDTPCQCCP 200

 Score = 31.2 bits (69), Expect = 6.8
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
 Frame = +2

Query: 26   FPFCRCSDYRCGAAPYKM---LKASEETLPNGNYKVCFNFNDVGCPTNNAC---CTSLLQ 187
            FP C C+  + G  P+ +         T     Y  CF  N +  P +      C S   
Sbjct: 853  FPNCTCNTTQ-GILPFTVSPRFTTGNRTATTTEY--CFTVNTI--PPSQIMPNTCGSAND 907

Query: 188  SVGKVEVQADKACKATIAASTFGNVSKAGSTFFDDEFSVG-----KVRITALNANRQMMD 352
            ++ K+E  A++   + +A     N+  A   F     S G      ++ T +N +     
Sbjct: 908  TLTKIEWYANQNMSSWVAGI---NLYPASGPFVKRSSSWGAAGTNSLKATPINWSIAQAS 964

Query: 353  NSQLCLTIRPPCNSFDVFFQSNKVGGSGLYQYALFNSKADCCP 481
             +++C+ ++ P    D+      +G +     + FNS  DCCP
Sbjct: 965  GARVCVEVKNPKTMSDLC-----LGIASQCFLSTFNSNKDCCP 1002

>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
           sulfated surface glycoprotein 185 - Volvox carteri
           gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
           185 [Volvox carteri]
          Length = 485

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 27/179 (15%)
 Frame = +2

Query: 26  FPFCRCSDYRCGAAPYKMLKASEETLPNGNYKVCFNF----NDVGC---PTNNACCTSLL 184
           FP+C+C+ YR   +PY++     E    GN  +C++         C   P    CC++ L
Sbjct: 39  FPYCKCT-YRQRRSPYRLKYVGAENNYKGNDWLCYSIVLDTTGTVCQTVPLTEPCCSADL 97

Query: 185 QSVGKVEVQADKACKATIA-ASTFGNVSKA--GSTFFDDEFSVGKVRITALNANRQMMDN 355
               K+E     +CK T+  A  F  + +   G    +   +VG   +T +     +   
Sbjct: 98  Y---KIEFDVKPSCKGTVTRAMVFKGIDRTVGGVRVLESISTVGIDDVTGVPGAAILRIV 154

Query: 356 SQLCLTIRPPCNSFDVFFQS------NKVGGS-----------GLYQYALFNSKADCCP 481
             L L    P +    F  +      N+V GS           G   Y++FNS  DCCP
Sbjct: 155 KDLAL----PYSVVASFLPNGLPVCINRVPGSCTFPELFMDVNGTASYSVFNSDKDCCP 209

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 45/164 (27%), Positives = 66/164 (39%), Gaps = 11/164 (6%)
 Frame = +2

Query: 23  GFPFCRCSDYRCGAAPYKMLKA--SEETLPNG-NYKVCFNF---NDVGCPTNNA---CCT 175
           GFPFC C      + P+++  A  S  T+  G   +VC      N      NN    CC+
Sbjct: 325 GFPFCECVSRSPSSYPWRVTVANVSAVTISGGAGERVCLKISVDNAAAATCNNGLGGCCS 384

Query: 176 SLLQSVGKVEVQADKACKATIAASTFGNVSKAGSTFFDDEFSVGKVRITALNAN-RQMMD 352
             L+   KVE+ A+  CK +I   T  N ++  S+F  D  +   ++ T L     Q + 
Sbjct: 385 DGLE---KVELFANGKCKGSILPFTLSNTAEIRSSFSWDS-TRPVLKFTRLGLTYAQGVA 440

Query: 353 NSQLCLTIR-PPCNSFDVFFQSNKVGGSGLYQYALFNSKADCCP 481
              LC  I+   C  F     ++   G G       N    CCP
Sbjct: 441 GGSLCFNIKGAGCTKF-----ADLCPGRGCTVAVFNNPDNTCCP 479

>prf||1604369A sulfated surface glycoprotein SSG185
          Length = 453

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 27/179 (15%)
 Frame = +2

Query: 26  FPFCRCSDYRCGAAPYKMLKASEETLPNGNYKVCFNF----NDVGC---PTNNACCTSLL 184
           FP+C+C+ YR   +PY++     E    GN  +C++         C   P    CC++ L
Sbjct: 39  FPYCKCT-YRQRRSPYRLKYVGAENNYKGNDWLCYSIVLDTTGTVCQTVPLTEPCCSADL 97

Query: 185 QSVGKVEVQADKACKATIA-ASTFGNVSKA--GSTFFDDEFSVGKVRITALNANRQMMDN 355
               K+E     +CK T+  A  F  + +   G    +   +VG   +T +     +   
Sbjct: 98  Y---KIEFDVKPSCKGTVTRAMVFKGIDRTVGGVRVLESISTVGIDDVTGVPGAAILRIV 154

Query: 356 SQLCLTIRPPCNSFDVFFQS------NKVGGS-----------GLYQYALFNSKADCCP 481
             L L    P +    F  +      N+V GS           G   Y++FNS  DCCP
Sbjct: 155 KDLAL----PYSVVASFLPNGLPVCINRVPGSCTFPELFMDVNGTASYSVFNSDKDCCP 209



EST assemble image


clone accession position
1 LCL004h11_r AV626241 1 456
2 CL22a06_r AV394228 196 483




Chlamydomonas reinhardtii
Kazusa DNA Research Institute