KCC000356A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000356A_C01 KCC000356A_c01
CTCTCGACAAACATTTCAGTAAGACACTCAGAGCTCATACGTAGAGCAACAGCTTCACTG
CCATTGTCTTTGAAACAGACTGTTCAGCTTCAGGACCGACTCCTCTTCTTCTCAGGTCTC
CTCGCCTCGCCTCGATGTGTCAACGCACACTTAGAGCTGGAACGGGCCTCCACGCCCGCT
CAGCCGTGCGCCCAGCCAGGCCGCGGCCAGGCCGGAGCAAAGTTGCCACAGTGGTGTGCA
GTGCGCCTGTAGTGCCTGTGACGACCACCACCTCGACTTCTACTTCTTCTACGGATACTA
CTCAGCCAGAGCTAGGCTGGCGGACGGACCTGCGGACCACCTATGTGCTGGGCGCGCAGC
TGGGCGTGGGGTCATTTGGCAGCGTTCACAAGGCGTTCCACGCGGAGTCCGGGGAGCAGG
TCGCTGTGAAAACGCTGCCGAAAGAGCGTCCCAAGCTCAGCCGCGCCAAGGTCCTTGAAA
AGCTCCAAAGGGAGCTGACCCTTCTCGACCGGCTCTCGGACAGCCCACGCGTTGTGCAGC
TTATGGAGTGCTTTGAGGACGAGGACCACGTCTACATCGTTACGGAGGCGTGCGAAGGTG
GTGACTTGCAACGTTTCAGCGACACCTACGGCCCGCTCACGGAGCGCTGCTTGGCCCTAG
TTGCGTTGGAGGTGCTCCAAATCGTCCGCAGCTGCCACCGGTTAGGCATCGTGCACGGCG
ACGTGAAGCCTGCCAACTTCTGCATTAAAGATGAGCACCGTCACCCCTACGCTGCGTCAC
CGGCGGCGCTGCAGCGCTCGCCGTGGCTAAAGGCGATTGACTTTGGCTGCAGCCAGCTGC
ACTACCGCCACGCGCGCCTCTCCAAGCGCTCGGGCACGCCCGTGTACATGGCCCCTGAGA
TCTTTAAGCGGGACTACTCGTTTGAGGTGGACGTGTGGTCGACGGGCGTGCTGCTGTACC
AGCTGTACTGCCGGCACTTCCCCTTCTGGGCCGGCGACAGCTACAACCGCGCTCTCTCCC
TGGACGACGTGGCGAAGGGCATCACGGAGAACGCATTCGCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000356A_C01 KCC000356A_c01
         (1062 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF14337.1|U73610_1 ATCDPK1a [Arabidopsis thaliana]                161  2e-38
ref|NP_177612.2| calcium-dependent protein kinase, putative (CDP...   161  2e-38
dbj|BAC83205.1| putative calcium-dependent protein kinase [Oryza...   157  2e-37
pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Ar...   156  5e-37
pir||H86322 calcium-dependent protein kinase 1 [imported] - Arab...   156  7e-37

>gb|AAF14337.1|U73610_1 ATCDPK1a [Arabidopsis thaliana]
          Length = 274

 Score =  161 bits (408), Expect = 2e-38
 Identities = 92/234 (39%), Positives = 132/234 (56%)
 Frame = +3

Query: 321  RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
            +T +   Y+LG +LG G FG  +     E+ E +A K++ K   KL  A  +E ++RE+T
Sbjct: 4    QTQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKR--KLRTAVDVEDVRREVT 61

Query: 501  LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
            ++  L + P VV+L   +ED + V++V E CEGG+L       G  TER  A VA  + +
Sbjct: 62   IMSTLPEHPNVVKLKATYEDNETVHLVMELCEGGELFGRIVARGHYTERAAATVARTIAE 121

Query: 681  IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
            +VR CH  G++H D+KP NF   ++            + +  LKAIDFG S L     R 
Sbjct: 122  VVRMCHVNGVMHRDLKPENFLFANK------------KENSALKAIDFGLSVLFKPGERF 169

Query: 861  SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
            ++  G+P YMAPE+ KR+Y  EVDVWS GV+LY L C   PFWA      AL++
Sbjct: 170  TEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAI 223

>ref|NP_177612.2| calcium-dependent protein kinase, putative (CDPK) [Arabidopsis
            thaliana] gi|25287686|pir||F96776 hypothetical protein
            F25A4.29 [imported] - Arabidopsis thaliana
            gi|5882721|gb|AAD55274.1|AC008263_5 Strong similarity to
            gb|D21805 calcium-dependent protein kinase (CDPK) from
            Arabidopsis thaliana and contains a PF|00069 Eukaryotic
            protein kinase and 4 PF|00036 EF hand domains
            gi|22655135|gb|AAM98158.1| calcium-dependent protein
            kinase, putative [Arabidopsis thaliana]
            gi|31711966|gb|AAP68339.1| At1g74740 [Arabidopsis
            thaliana]
          Length = 541

 Score =  161 bits (407), Expect = 2e-38
 Identities = 91/234 (38%), Positives = 133/234 (55%)
 Frame = +3

Query: 321  RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
            ++ +   Y+LG +LG G FG  +     E+ E +A K++ K   KL  A  +E ++RE+T
Sbjct: 52   QSQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKR--KLRTAVDVEDVRREVT 109

Query: 501  LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
            ++  L + P VV+L   +ED ++V++V E CEGG+L       G  TER  A VA  + +
Sbjct: 110  IMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYTERAAATVARTIAE 169

Query: 681  IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
            +VR CH  G++H D+KP NF   ++            + +  LKAIDFG S L     R 
Sbjct: 170  VVRMCHVNGVMHRDLKPENFLFANK------------KENSALKAIDFGLSVLFKPGERF 217

Query: 861  SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
            ++  G+P YMAPE+ KR+Y  EVDVWS GV+LY L C   PFWA      AL++
Sbjct: 218  TEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAI 271

>dbj|BAC83205.1| putative calcium-dependent protein kinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 550

 Score =  157 bits (398), Expect = 2e-37
 Identities = 86/222 (38%), Positives = 127/222 (56%)
 Frame = +3

Query: 327 DLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELTLL 506
           D+   Y LG +LG G FG  +     E+G+  A K++ K+  KL  A  +E ++RE+ ++
Sbjct: 70  DIAARYELGGELGRGEFGVTYLCTERETGDAYACKSISKK--KLRTAVDIEDVRREVDIM 127

Query: 507 DRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQIV 686
             L   P +V L + +ED++ V++V E CEGG+L       G  TER  ALV   ++++V
Sbjct: 128 RHLPKHPNIVTLRDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAALVTRTIVEVV 187

Query: 687 RSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARLSK 866
           + CH+ G++H D+KP NF   ++            + +  LKAIDFG S       R ++
Sbjct: 188 QMCHKHGVMHRDLKPENFLFANK------------KETAALKAIDFGLSVFFTPGERFTE 235

Query: 867 RSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWA 992
             G+P YMAPE+ KR+Y  EVDVWS GV+LY L C   PFWA
Sbjct: 236 IVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWA 277

>pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Arabidopsis
            thaliana gi|604880|dbj|BAA04829.1| calcium-dependent
            protein kinase [Arabidopsis thaliana]
          Length = 493

 Score =  156 bits (395), Expect = 5e-37
 Identities = 89/234 (38%), Positives = 130/234 (55%)
 Frame = +3

Query: 321  RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
            +T +   Y+LG +LG G FG  +     E+ E +A K++ K   KL  A  +E ++RE+ 
Sbjct: 4    QTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKR--KLRTAVDIEDVRREVA 61

Query: 501  LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
            ++  L + P VV+L   +ED ++V++V E CEGG+L       G  TER  A VA  + +
Sbjct: 62   IMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIAE 121

Query: 681  IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
            +V  CH  G++H D+KP NF   ++            + SP LKAIDFG S       + 
Sbjct: 122  VVMMCHSNGVMHRDLKPENFLFANKK-----------ENSP-LKAIDFGLSVFFKPGDKF 169

Query: 861  SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
            ++  G+P YMAPE+ KRDY   VDVWS GV++Y L C   PFWA      AL++
Sbjct: 170  TEIVGSPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGAPPFWAETEQGVALAI 223

>pir||H86322 calcium-dependent protein kinase 1 [imported] - Arabidopsis thaliana
            gi|6730697|gb|AAF27092.1|AC011809_1 calcium-dependent
            protein kinase 1 [Arabidopsis thaliana]
          Length = 545

 Score =  156 bits (394), Expect = 7e-37
 Identities = 89/234 (38%), Positives = 130/234 (55%)
 Frame = +3

Query: 321  RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
            +T +   Y+LG +LG G FG  +     E+ E +A K++ K   KL  A  +E ++RE+ 
Sbjct: 56   QTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKR--KLRTAVDIEDVRREVA 113

Query: 501  LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
            ++  L + P VV+L   +ED ++V++V E CEGG+L       G  TER  A VA  + +
Sbjct: 114  IMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIAE 173

Query: 681  IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
            +V  CH  G++H D+KP NF   ++            + SP LKAIDFG S       + 
Sbjct: 174  VVMMCHSNGVMHRDLKPENFLFANKK-----------ENSP-LKAIDFGLSVFFKPGDKF 221

Query: 861  SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
            ++  G+P YMAPE+ KRDY   VDVWS GV++Y L C   PFWA      AL++
Sbjct: 222  TEIVGSPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGVPPFWAETEQGVALAI 275



EST assemble image


clone accession position
1 HCL079f10_r AV643987 1 563
2 HCL050e06_r AV642364 39 656
3 HCL059d09_r AV642861 88 605
4 HCL018e05_r AV640572 102 472
5 HCL063g03_r AV643099 102 579
6 LCL040g05_r AV628374 103 412
7 LCL007g08_r AV626360 104 212
8 LCL012b02_r AV626599 104 644
9 LCL037e05_r AV628150 104 656
10 HCL042h07_r AV641947 106 525
11 HCL020e01_r AV640681 107 234
12 LCL087b07_r AV630978 107 609
13 HCL027d09_r AV641081 108 608
14 HCL018g12_r AV640593 109 612
15 HCL083h06_r AV644205 111 646
16 MXL007f12_r BP093385 111 543
17 HCL053a08_r AV642508 114 581
18 CL48c08_r AV395802 114 643
19 HCL065h09_r AV643223 114 605
20 HCL040g03_r AV641813 114 648
21 LCL050g12_r AV629040 114 640
22 CL36b09_r AV395143 121 613
23 CL21f06_r AV394364 121 647
24 CL41d11_r AV395394 123 584
25 MXL064b09_r BP096746 123 460
26 HCL068f03_r AV643380 123 587
27 LCL092e10_r AV631356 123 415
28 HCL016g10_r AV640467 123 591
29 HCL041h10_r AV641890 123 543
30 HCL077f06_r AV643880 123 557
31 HCL046f04_r AV642159 124 609
32 HCL031a04_r AV641282 125 532
33 HCL039b08_r AV641713 130 656
34 HCL055a04_r AV642627 130 573
35 LCL098a05_r AV631673 134 579
36 LCL092d03_r AV631344 136 273
37 LCL027a08_r AV627457 149 310
38 HCL066b06_r AV643237 153 621
39 CL40g01_r AV395340 175 686
40 HCL056b06_r AV642692 246 728
41 HCL063h01_r AV643107 523 1000
42 HCL090c08_r AV644542 531 726
43 MXL048a11_r BP095833 641 1169




Chlamydomonas reinhardtii
Kazusa DNA Research Institute