Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000355A_C01 KCC000355A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_317312.1| ENSANGP00000006850 [Anopheles gambiae] gi|21300... 247 7e-65
sp|Q9NW08|RPC2_HUMAN DNA-directed RNA polymerase III subunit 127... 242 2e-63
ref|NP_060552.2| RNA polymerase III subunit RPC2 [Homo sapiens] ... 242 2e-63
emb|CAD97689.1| hypothetical protein [Homo sapiens] 242 2e-63
sp||P59470_1 [Segment 1 of 2] DNA-directed RNA polymerase III su... 240 1e-62
>ref|XP_317312.1| ENSANGP00000006850 [Anopheles gambiae] gi|21300544|gb|EAA12689.1|
ENSANGP00000006850 [Anopheles gambiae str. PEST]
Length = 1113
Score = 247 bits (631), Expect = 7e-65
Identities = 122/185 (65%), Positives = 149/185 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ DEARD+LA +L HVPVP + F K YVA+M+RR++ A LD + +DDRDYYGNKR
Sbjct: 281 KTTADEARDLLATTILAHVPVPSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 340
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSL+FEDLFKR N ++K AD + K +A QFDV K +R IT GLE+A+S
Sbjct: 341 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDVGKHMREALITAGLETAIS 399
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLC 541
+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR+L PSQWGMLC
Sbjct: 400 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLC 459
Query: 542 PADTP 556
P+DTP
Sbjct: 460 PSDTP 464
>sp|Q9NW08|RPC2_HUMAN DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA
polymerase III subunit 2) (RPC2)
gi|28277230|gb|AAH46238.1| RNA polymerase III subunit
RPC2 [Homo sapiens]
Length = 1133
Score = 242 bits (618), Expect = 2e-63
Identities = 120/185 (64%), Positives = 152/185 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLC 541
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR+L PSQWGMLC
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC 480
Query: 542 PADTP 556
P+DTP
Sbjct: 481 PSDTP 485
>ref|NP_060552.2| RNA polymerase III subunit RPC2 [Homo sapiens]
gi|24429617|gb|AAM18214.1| RNA polymerase III subunit
RPC2 [Homo sapiens]
Length = 1133
Score = 242 bits (618), Expect = 2e-63
Identities = 120/185 (64%), Positives = 152/185 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLC 541
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR+L PSQWGMLC
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC 480
Query: 542 PADTP 556
P+DTP
Sbjct: 481 PSDTP 485
>emb|CAD97689.1| hypothetical protein [Homo sapiens]
Length = 1133
Score = 242 bits (618), Expect = 2e-63
Identities = 120/185 (64%), Positives = 152/185 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLC 541
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR+L PSQWGMLC
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC 480
Query: 542 PADTP 556
P+DTP
Sbjct: 481 PSDTP 485
>sp||P59470_1 [Segment 1 of 2] DNA-directed RNA polymerase III subunit 127.6 kDa
polypeptide (RNA polymerase III subunit 2) (RPC2)
gi|26333219|dbj|BAC30327.1| unnamed protein product [Mus
musculus]
Length = 551
Score = 240 bits (612), Expect = 1e-62
Identities = 119/185 (64%), Positives = 151/185 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLC 541
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRK SGPR+L PSQWGMLC
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKESGPRSLQPSQWGMLC 480
Query: 542 PADTP 556
P+DTP
Sbjct: 481 PSDTP 485
