Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000353A_C01 KCC000353A_c01
(570 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_629941.1| putative ABC transporter [Streptomyces coelicol... 47 1e-04
ref|NP_116467.1| t116 [Tupaia herpesvirus] gi|14210799|gb|AAK571... 45 5e-04
ref|XP_309151.1| ENSANGP00000018517 [Anopheles gambiae] gi|21292... 44 0.002
pir||A49227 sialidase - Actinomyces viscosus gi|141852|gb|AAA219... 44 0.002
ref|NP_499957.1| predicted CDS, COLlagen structural gene (col-10... 43 0.003
>ref|NP_629941.1| putative ABC transporter [Streptomyces coelicolor A3(2)]
gi|7480352|pir||T35192 probable ABC transporter -
Streptomyces coelicolor gi|3036883|emb|CAA18516.1|
putative ABC transporter [Streptomyces coelicolor A3(2)]
Length = 744
Score = 47.4 bits (111), Expect = 1e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 243 PTAHSPPATGLGIAAAPAEAAPSP--LQVKAEPSEPADTPISNGGGTATDGVGSSAPAGS 416
P P +G G AAP+ +AP+P + + PS PA P + G + G SAPAG
Sbjct: 369 PRQAPAPVSGHGPEAAPSPSAPAPGPSEPASGPSAPAPGPPAPAAGPSAPAPGPSAPAGG 428
Query: 417 SADPDSGPRENAS 455
+ P GP E AS
Sbjct: 429 PSAPAPGPSEPAS 441
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 234 PQAPTAHSPPATGLGI-AAAPAEAAPSPLQVKAEPSEPADTPISNGGGTATDGVGSSAPA 410
P+A + S PA G A+ P+ AP P A PS PA P + GG + G S PA
Sbjct: 381 PEAAPSPSAPAPGPSEPASGPSAPAPGPPAPAAGPSAPAPGPSAPAGGPSAPAPGPSEPA 440
Query: 411 GSSADPDSGP 440
+ P GP
Sbjct: 441 SGPSAPAPGP 450
>ref|NP_116467.1| t116 [Tupaia herpesvirus] gi|14210799|gb|AAK57162.1| t116 [Tupaia
herpesvirus]
Length = 323
Score = 45.4 bits (106), Expect = 5e-04
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 228 STPQAPTAHSPPATGLGIAAAPAEAAPSPLQVKAEPSEPADTPISNGGG----TATDGVG 395
+ P AP +PPA G +AA+ A AA S SEP P + G AT
Sbjct: 115 TAPAAPPTPAPPAPGTTVAASSAAAAVSGTAAAVRTSEPTSRPNATTAGGNDSLATTVAN 174
Query: 396 SSAPAGSSADPDSGPRENASTQDKMPASTNGG 491
S+AP + + +G E +S + +T+ G
Sbjct: 175 STAPPANGSATSAGAEETSSAPSPIANATDAG 206
>ref|XP_309151.1| ENSANGP00000018517 [Anopheles gambiae] gi|21292739|gb|EAA04884.1|
ENSANGP00000018517 [Anopheles gambiae str. PEST]
Length = 441
Score = 43.5 bits (101), Expect = 0.002
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 195 HAPTQKMGCLLSTPQAPTAHSPPATGLG--IAAAPAEAAPSPLQVKAEPSEPADTPISNG 368
H T +G + A PPA G G +AAA A AAPS L ++ P D + +
Sbjct: 85 HDGTNSVGSNSAGGAASGTVPPPAGGSGASVAAAAAAAAPSSLLLRCGPDGMVDYGLDDQ 144
Query: 369 GGTATDGVGSSAPAGSSADPDSGPRENASTQDKMPAST 482
G T G +P S SG R + ++ D AS+
Sbjct: 145 GIDLTQSPGRDSPVSLSGSAGSGSRHSTASLDSGRASS 182
>pir||A49227 sialidase - Actinomyces viscosus gi|141852|gb|AAA21932.1| sialidase
Length = 901
Score = 43.5 bits (101), Expect = 0.002
Identities = 39/132 (29%), Positives = 53/132 (39%), Gaps = 17/132 (12%)
Frame = +3
Query: 198 APTQKMGCLLSTPQAPTAHSPPATGLGIAAAPA-EAAPSPLQVKAEPSEPADTPISNGGG 374
APT+K + PT P++ +AAP +AP+P A +EP P +
Sbjct: 681 APTEKPAPSAAPSAEPTQAPAPSSAPEPSAAPEPSSAPAPEPTTAPSTEPTPAPAPSSAP 740
Query: 375 TATDG-------VGSSAPAGS---------SADPDSGPRENASTQDKMPASTNGGRKVAN 506
TDG SSAPA S +P P S+ K P +T V N
Sbjct: 741 EQTDGPTAAPAPETSSAPAAEPTQAPTVAPSVEPTQAPGAQPSSAPK-PGATGRAPSVVN 799
Query: 507 NKHTLSAVDKGT 542
K T +A + GT
Sbjct: 800 PKATGAATEPGT 811
>ref|NP_499957.1| predicted CDS, COLlagen structural gene (col-102) [Caenorhabditis
elegans] gi|7496325|pir||T33110 hypothetical protein
C18H7.3 - Caenorhabditis elegans
gi|9798133|gb|AAF98609.1| Hypothetical protein C18H7.3
[Caenorhabditis elegans]
Length = 460
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/84 (30%), Positives = 37/84 (43%)
Frame = +3
Query: 240 APTAHSPPATGLGIAAAPAEAAPSPLQVKAEPSEPADTPISNGGGTATDGVGSSAPAGSS 419
AP +P A G G A PA AAP E + P + G G + G++AP ++
Sbjct: 336 APAEAAPAAEGAGGGAEPAGAAPDAAAAAPEAAPAEAAPAAEGAGGGAEPAGAAAPDAAA 395
Query: 420 ADPDSGPRENASTQDKMPASTNGG 491
A P E A+ + PA+ G
Sbjct: 396 AAP-----EAAAAPEAAPAAEGAG 414
Score = 39.7 bits (91), Expect = 0.029
Identities = 25/76 (32%), Positives = 37/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 228 STPQAPTAHSPPATGLGIAAAPAEAAPSPLQVKAEPSEPADT-PISNGGGTATDGVGSSA 404
+ P+A +P A G G A PA AA A + PA+ P + G G + G+ A
Sbjct: 299 AAPEAAPEAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAPAEAAPAAEGAGGGAEPAGA-A 357
Query: 405 PAGSSADPDSGPRENA 452
P ++A P++ P E A
Sbjct: 358 PDAAAAAPEAAPAEAA 373
Score = 39.3 bits (90), Expect = 0.038
Identities = 22/63 (34%), Positives = 31/63 (48%)
Frame = +3
Query: 264 ATGLGIAAAPAEAAPSPLQVKAEPSEPADTPISNGGGTATDGVGSSAPAGSSADPDSGPR 443
A G G A PA AAP E + P P + G G + G++AP ++A P++ P
Sbjct: 280 ALGAGGGAEPAGAAPEAAAAAPE-AAPEAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAPA 338
Query: 444 ENA 452
E A
Sbjct: 339 EAA 341
Score = 35.4 bits (80), Expect = 0.55
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 240 APTAHSPPATGLGIAAAPAEAAPSPLQVKAEP---SEPADTPISNGGGTATDGVGSSAPA 410
AP +P A G G A PA AA +P A P + P P + G G G + PA
Sbjct: 368 APAEAAPAAEGAGGGAEPAGAA-APDAAAAAPEAAAAPEAAPAAEGAG------GGAEPA 420
Query: 411 GSSADPDSGPRENASTQDKMPASTNGG 491
G++ + + E A + P + GG
Sbjct: 421 GAAPEAAAAAPEGAGGGEAPPTNGKGG 447
