Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000293A_C01 KCC000293A_c01
(458 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51340.1|AC012562_1 unknown protein; 28504-31237 [Arabidops... 36 0.18
ref|NP_187474.2| KH domain protein [Arabidopsis thaliana] gi|264... 36 0.18
gb|AAK49004.1| USC3-5p [Myxococcus xanthus] 35 0.31
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 35 0.52
dbj|BAC32669.1| unnamed protein product [Mus musculus] 34 0.68
>gb|AAG51340.1|AC012562_1 unknown protein; 28504-31237 [Arabidopsis thaliana]
Length = 319
Score = 36.2 bits (82), Expect = 0.18
Identities = 28/88 (31%), Positives = 38/88 (42%)
Frame = -3
Query: 438 ICRLWLISALGGLTGLQPWAQRQRQKFRRRHASPSRAPCPPLPALLAAGFAFCWNRHPQQ 259
IC L + +TG+ P Q R RH SPS P L + ++ G WN P +
Sbjct: 87 ICSRLLNQEIFRITGMMP-NQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE 145
Query: 258 LQGAAGSSALELIQRWRTNPAPPDSEPL 175
G A+E W+ PA P S P+
Sbjct: 146 RIGGPHGMAME----WQGAPASPSSYPV 169
>ref|NP_187474.2| KH domain protein [Arabidopsis thaliana]
gi|26449965|dbj|BAC42103.1| unknown protein [Arabidopsis
thaliana]
Length = 283
Score = 36.2 bits (82), Expect = 0.18
Identities = 28/88 (31%), Positives = 38/88 (42%)
Frame = -3
Query: 438 ICRLWLISALGGLTGLQPWAQRQRQKFRRRHASPSRAPCPPLPALLAAGFAFCWNRHPQQ 259
IC L + +TG+ P Q R RH SPS P L + ++ G WN P +
Sbjct: 51 ICSRLLNQEIFRITGMMP-NQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE 109
Query: 258 LQGAAGSSALELIQRWRTNPAPPDSEPL 175
G A+E W+ PA P S P+
Sbjct: 110 RIGGPHGMAME----WQGAPASPSSYPV 133
>gb|AAK49004.1| USC3-5p [Myxococcus xanthus]
Length = 575
Score = 35.4 bits (80), Expect = 0.31
Identities = 23/69 (33%), Positives = 29/69 (41%), Gaps = 1/69 (1%)
Frame = -3
Query: 396 GLQPWAQRQRQKFR-RRHASPSRAPCPPLPALLAAGFAFCWNRHPQQLQGAAGSSALELI 220
G W + R+ R RR + P R P PP P A A W+RH Q
Sbjct: 205 GRSSWPMQYRRARRVRRPSPPCRLPAPPGPCQRRAASAVRWHRHAQC-----------PA 253
Query: 219 QRWRTNPAP 193
+RWR+ AP
Sbjct: 254 RRWRSRTAP 262
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 34.7 bits (78), Expect = 0.52
Identities = 24/59 (40%), Positives = 31/59 (51%), Gaps = 2/59 (3%)
Frame = +1
Query: 286 GKACSKKGWQWRTRRPRRAGMPTPELLPLPLRPRLQASKPAKGADKPKAAD--AAAPAS 456
GKA +K P + G P+P P PR A KPA A++P AA+ AAAPA+
Sbjct: 56 GKAAPRKA------APAKPGAPSPAQAARPAAPRPPAPKPA-AAERPAAAERPAAAPAA 107
>dbj|BAC32669.1| unnamed protein product [Mus musculus]
Length = 142
Score = 34.3 bits (77), Expect = 0.68
Identities = 22/63 (34%), Positives = 31/63 (48%), Gaps = 5/63 (7%)
Frame = +2
Query: 281 QKAKPAARRAGNGGQGAREGLA---CRRRNFCRCRCAQGCRPVSPP--RALISQRRQMQR 445
++A+P R+ G+GG G G A RRR GC+P +PP RA R ++
Sbjct: 43 RRARPGTRKKGSGGGGGGGGGAGCLSRRRRI-------GCQPAAPPAGRAWTDSSRALEP 95
Query: 446 LPP 454
PP
Sbjct: 96 RPP 98
