Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000288A_C06 KCC000288A_c06
(1312 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chlorop... 283 5e-75
sp|Q41643|PSBQ_VOLCA Oxygen-evolving enhancer protein 3, chlorop... 214 4e-54
gb|AAP79208.1| oxygen-evolving enhancer protein 3 [Bigelowiella ... 114 3e-24
dbj|BAC83128.1| putative Oxygen-evolving enhancer protein 3-1, c... 70 8e-11
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 67 5e-10
>sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3)
gi|81254|pir||S05509 photosystem II oxygen-evolving
complex protein 3 precursor - Chlamydomonas reinhardtii
gi|18164|emb|CAA32061.1| OEE3 precursor protein
[Chlamydomonas reinhardtii] gi|228626|prf||1807335B
photosystem II OEE3 protein
Length = 199
Score = 283 bits (724), Expect = 5e-75
Identities = 163/206 (79%), Positives = 164/206 (79%)
Frame = +1
Query: 55 MALASKVATRPAVASRPGCRVVVLRLLASRCRGRCLGCVCLAELLSPACGPARAAPWL*P 234
MALASKVATRPAVASR G VV R G V L S A A
Sbjct: 1 MALASKVATRPAVASRRGAVVV-------RASGESRRAVLGGLLASAVAAVAPKAALALT 53
Query: 235 PSTCSMTARLRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLD 414
P +RDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLD
Sbjct: 54 PVDLFDDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLD 113
Query: 415 VFIQKSYWTEAREQLRRQVGTLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALR 594
VFIQKSYWTEAREQLRRQVGTLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALR
Sbjct: 114 VFIQKSYWTEAREQLRRQVGTLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALR 173
Query: 595 EKDQASAAKKLEITKAKLDSVLAAVL 672
EKDQASAAKKLEITKAKLDSVLAAVL
Sbjct: 174 EKDQASAAKKLEITKAKLDSVLAAVL 199
>sp|Q41643|PSBQ_VOLCA Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3)
gi|7484418|pir||S72224 oxygen-evolving enhancer protein
3 precursor - Volvox carteri gi|732536|gb|AAB40980.1|
oxygen-evolving enhancer protein 3
Length = 202
Score = 214 bits (544), Expect = 4e-54
Identities = 128/207 (61%), Positives = 146/207 (69%), Gaps = 1/207 (0%)
Frame = +1
Query: 55 MALASKVATRPAVASRPGCRVVVLRLLASRCRGRCLGCVCLAELLSPACGPARAAPWL*P 234
MALA KVA+RPAVASR G VVV+R R G + + + A+AA
Sbjct: 1 MALAQKVASRPAVASRRG--VVVVRASVESRRAVLGGLLASTVVALTSANKAQAAA---T 55
Query: 235 PSTCSMTARLRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLD 414
P ++R+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL+
Sbjct: 56 PVDLFDDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLE 115
Query: 415 VFIQKSYWTEAREQLRRQVGTLRFDLNTLASTK-EKEAKKAALGLRKEFIQAVEDLDFAL 591
FI+K+YWTEAREQLRRQVGTLRFDLNTLAS K K KK AL L+KEFIQ VEDLDFAL
Sbjct: 116 GFIKKNYWTEAREQLRRQVGTLRFDLNTLASAKGVKAEKKKALELKKEFIQKVEDLDFAL 175
Query: 592 REKDQASAAKKLEITKAKLDSVLAAVL 672
REKD+ SA KKLE K+ LDSVLA VL
Sbjct: 176 REKDETSALKKLEAAKSALDSVLAYVL 202
>gb|AAP79208.1| oxygen-evolving enhancer protein 3 [Bigelowiella natans]
Length = 237
Score = 114 bits (286), Expect = 3e-24
Identities = 60/135 (44%), Positives = 84/135 (61%)
Frame = +1
Query: 259 RLRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSYW 438
+ + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + F+ K YW
Sbjct: 102 KAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDKKYW 160
Query: 439 TEAREQLRRQVGTLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALREKDQASAA 618
+E R LRR VGTLRFDL LA +K AKK A+ K+F +A+E LD A+ +K+ +
Sbjct: 161 SEGRTVLRRLVGTLRFDLAALADSKSGAAKKEAIKANKDFFEALESLDLAMYKKNVEAGQ 220
Query: 619 KKLEITKAKLDSVLA 663
K + T A + L+
Sbjct: 221 KAYQKTMAAYKATLS 235
>dbj|BAC83128.1| putative Oxygen-evolving enhancer protein 3-1, chloroplast
precursor (OEE3) [Oryza sativa (japonica
cultivar-group)]
Length = 213
Score = 70.1 bits (170), Expect = 8e-11
Identities = 60/185 (32%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Frame = +1
Query: 112 RVVVLRLLASRCRGRCLGCVCLAELLSPA-CGPARAAPWL*PPSTCSMTARLRDRGFDLI 288
R VL L+A+ G L LAE P GP PP + + L
Sbjct: 42 RRAVLGLVATGIAGGALAQAALAEAAKPIKLGPP-------PPPSGGLPGTLNSD----- 89
Query: 289 YEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQ 468
+ARD DLP +RE F E R KES I +L I+K W R+ LR +
Sbjct: 90 -QARDTDLP--LRERFYLQPLPPAEAAARAKESAQDI-INLKPLIEKKQWPFVRDDLRLR 145
Query: 469 VGTLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALREKDQASAAKKLEITKAKL 648
LR+DL T+ ++K K+ KK L + ++ LD A + K A K +TK+ L
Sbjct: 146 ASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSAL 205
Query: 649 DSVLA 663
VLA
Sbjct: 206 GDVLA 210
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 67.4 bits (163), Expect = 5e-10
Identities = 69/213 (32%), Positives = 83/213 (38%), Gaps = 11/213 (5%)
Frame = -1
Query: 685 KRALTGRRPGRSPAWPW*SPASWRRRPGPSRAGRSPGPQRPG*TPCAGPGRPSWPPSPWS 506
+R RP +PA P P +P P A +P P P T A P P+ P + S
Sbjct: 93 ERPAAAERPAAAPAAPGPRPGP---KPAPRPAPAAPAPAAPEFT--APPSAPAAPAAAAS 147
Query: 505 RPGCSGRSAGCRPGGAAAREPQSSRTSG*TRPGQRRCGPQTP--SRASWSRPGKREPG*S 332
P R +PGGA P + G R + G + R +RPG + P
Sbjct: 148 GPRPGARPGAPKPGGARPATPGQGQ-GGQVRGERTDRGDRGDRGDRQGAARPGGQAP--R 204
Query: 331 PHGR-SGAGPGRGPRRSGRSHGRATERSSNRSTGVRAKGQPLRGHRQATAAQPGRHSPST 155
P R +G PG P SG S G A R R G P R A PG P
Sbjct: 205 PGARPAGPRPGNNPFTSGGSTGMA------RPQAPRPGGAP----RPGGAGAPGGPRPQG 254
Query: 154 VRGSD-------SPGGAAQPHGTPGG-RPRRGG 80
G D PGGA +P G PGG RP GG
Sbjct: 255 AGGQDRAPRPQGGPGGAPRPQGGPGGARPTPGG 287
Score = 60.1 bits (144), Expect = 9e-08
Identities = 59/195 (30%), Positives = 74/195 (37%), Gaps = 20/195 (10%)
Frame = -1
Query: 604 GPSRAGRSPGPQRPG*TPCAGPGRPSWPPSPWSRPGCSGRSAGC-RPGGAAAREPQSSRT 428
G A R P +PG A RP+ P P +P + R A RP A A
Sbjct: 55 GGKAAPRKAAPAKPGAPSPAQAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRPGP 114
Query: 427 SG*TRPGQRRCGPQTP-------------SRASWSRPGKREPG*SPHGRSGAGPGRGPRR 287
RP P P + AS RPG R P G A PG+G +
Sbjct: 115 KPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRPGARPGAPKPGGARPATPGQG--Q 172
Query: 286 SGRSHGRATERS-----SNRSTGVRAKGQPLRGHRQATAAQPGRHSPSTVRGSDSPGGAA 122
G+ G T+R +R R GQ R + +PG ++P T GS G A
Sbjct: 173 GGQVRGERTDRGDRGDRGDRQGAARPGGQAPRPGARPAGPRPG-NNPFTSGGST---GMA 228
Query: 121 QPHG-TPGGRPRRGG 80
+P PGG PR GG
Sbjct: 229 RPQAPRPGGAPRPGG 243
Score = 57.8 bits (138), Expect = 4e-07
Identities = 67/204 (32%), Positives = 75/204 (35%), Gaps = 7/204 (3%)
Frame = -1
Query: 670 GRRPGRSPAWPW*SPASWR-RRPGPSRAGRSPGPQRPG*TPCAGPGRPSWPPSPWSRPGC 494
G RPG +P S R + P P A R G PG G G P P PG
Sbjct: 211 GPRPGNNPFTSGGSTGMARPQAPRPGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPGG 270
Query: 493 S----GRSAGCRPGGAAAREPQSSRTSG*TRPGQRRCGP-QTPSR-ASWSRPGKREPG*S 332
+ G G RP PQ+ R G PG R P P R A+ RPG PG
Sbjct: 271 APRPQGGPGGARPTPGGMPRPQAPRPGG--APGGNRPNPGMMPQRPAAGPRPGGGGPG-- 326
Query: 331 PHGRSGAGPGRGPRRSGRSHGRATERSSNRSTGVRAKGQPLRGHRQATAAQPGRHSPSTV 152
G GPG G R G G R G G+P G A +PG
Sbjct: 327 -----GRGPGGGGRPGGPGGG------GGRPGGGGFAGRP-GGGGGGFAGRPGGPGGGGG 374
Query: 151 RGSDSPGGAAQPHGTPGGRPRRGG 80
+ PGG P G GGRP GG
Sbjct: 375 GFAGRPGG---PGGGGGGRPGFGG 395
Score = 44.3 bits (103), Expect = 0.005
Identities = 72/238 (30%), Positives = 83/238 (34%), Gaps = 29/238 (12%)
Frame = +3
Query: 39 QPNSKDGPRL*GCYP----PRRGLPPGVPCGCAAPPGESLPRTVLGLCLPG*AAVACLWP 206
+P K PR P P PP P AA P G PG A A
Sbjct: 111 RPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRPGARPGAPKPGGARPATPGQ 170
Query: 207 RKGCPLALTPVDLFD--DRSVARPWLRPDLRGPRPG--PAPERP*GLHP----GSRFPGR 362
+G + D D DR + RP + PRPG PA RP G +P GS R
Sbjct: 171 GQGGQVRGERTDRGDRGDRGDRQGAARPGGQAPRPGARPAGPRP-GNNPFTSGGSTGMAR 229
Query: 363 DQEAREGV*GPHRR*----PGRVHPEVL--LD*GSRAAAPPGRHP-------ALRPEHPG 503
Q R G G R PG P+ D R PG P RP G
Sbjct: 230 PQAPRPG--GAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPGGAPRPQGGPGGARPTPGG 287
Query: 504 LDQGE----GGQEGRPGPAQGVHPGR*GPGLRPAREGPGLRRQEAGDHQGQAGLRPGR 665
+ + + GG G P G+ P R G RP GPG R G G G GR
Sbjct: 288 MPRPQAPRPGGAPGGNRPNPGMMPQRPAAGPRPGGGGPGGRGPGGGGRPGGPGGGGGR 345
Score = 43.5 bits (101), Expect = 0.008
Identities = 58/188 (30%), Positives = 67/188 (34%), Gaps = 8/188 (4%)
Frame = -1
Query: 712 PKIQLLGGKKRALTGRR-PGRSPAWPW*SPASWRRRPG------PSRAGRSPGPQRPG*T 554
P+ Q GG+ RA + PG +P P P R PG R G +PG RP
Sbjct: 250 PRPQGAGGQDRAPRPQGGPGGAPR-PQGGPGGARPTPGGMPRPQAPRPGGAPGGNRPN-- 306
Query: 553 PCAGPGRPSWPPSPWSR-PGCSGRSAGCRPGGAAAREPQSSRTSG*TRPGQRRCGPQTPS 377
P P RP+ P P PG G G RPGG G RPG
Sbjct: 307 PGMMPQRPAAGPRPGGGGPGGRGPGGGGRPGGPGG---------GGGRPG---------G 348
Query: 376 RASWSRPGKREPG*SPHGRSGAGPGRGPRRSGRSHGRATERSSNRSTGVRAKGQPLRGHR 197
RPG G + GR G G G +GR G G R G RG
Sbjct: 349 GGFAGRPGGGGGGFA--GRPGGPGGGGGGFAGRPGGPGGGGGGRPGFGGRPGGPGGRGGT 406
Query: 196 QATAAQPG 173
Q +PG
Sbjct: 407 QGAFGRPG 414
Score = 40.8 bits (94), Expect = 0.054
Identities = 50/138 (36%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Frame = +3
Query: 267 RPWLRPDLRGPRPGPAPERP*------GLHPGSRFPGRDQEAREGV*GPHRR*PGRVHPE 428
RP P P PG P+RP G PG R PG R G G PG
Sbjct: 295 RPGGAPGGNRPNPGMMPQRPAAGPRPGGGGPGGRGPGGG--GRPGGPGGGGGRPGG---- 348
Query: 429 VLLD*GSRAAAPPGRHPALRPEHPGLDQGEGGQEGRPGPAQGVHPGR*GPGLRPAREGPG 608
G A P G G G GG GRPG G GR G G RP GPG
Sbjct: 349 -----GGFAGRPGGGGGGFAGRPGGPGGGGGGFAGRPGGPGGGGGGRPGFGGRPG--GPG 401
Query: 609 LRRQEAGDHQGQAGLRPG 662
R G QG G RPG
Sbjct: 402 GR----GGTQGAFG-RPG 414
Score = 37.7 bits (86), Expect = 0.45
Identities = 52/170 (30%), Positives = 56/170 (32%), Gaps = 19/170 (11%)
Frame = +3
Query: 219 PLALTPVDLFDDRSVARPWLRPDLRGPRPGPAP-ERP*GLHPGSRFPGRDQEAREGV*GP 395
P A P + RP P GPRPGP P RP P P
Sbjct: 84 PPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAAP------------E 131
Query: 396 HRR*PGRVHPEVLLD*GSRAAAPPG--RHPALRPEHPGLDQGEGGQ----------EGRP 539
P G R A PG + RP PG QG+GGQ G
Sbjct: 132 FTAPPSAPAAPAAAASGPRPGARPGAPKPGGARPATPG--QGQGGQVRGERTDRGDRGDR 189
Query: 540 GPAQG-VHPGR*G--PGLRPAREGPGLRRQEAGDHQGQA---GLRPGRRP 671
G QG PG PG RPA PG +G G A RPG P
Sbjct: 190 GDRQGAARPGGQAPRPGARPAGPRPGNNPFTSGGSTGMARPQAPRPGGAP 239
