Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000267A_C01 KCC000267A_c01
(703 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN07178.1| Crip-31 [Clerodendrum inerme] 50 4e-05
pir||A61183 hypothetical protein (sdsB region) - Pseudomonas sp 48 1e-04
ref|ZP_00141778.1| COG0028: Thiamine pyrophosphate-requiring enz... 44 0.003
ref|NP_295856.1| conserved hypothetical protein [Deinococcus rad... 42 0.012
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus] 40 0.027
>gb|AAN07178.1| Crip-31 [Clerodendrum inerme]
Length = 290
Score = 49.7 bits (117), Expect = 4e-05
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Frame = +2
Query: 233 RLRLRS*NPRWRPRGTPPCCRASACHA--CSPTQPLAARCSSLQSRAATV---RWRRLPS 397
R LRS + + RPR P CR+S+ + C+P+ P + CS + +++ RW R P+
Sbjct: 154 RKNLRSISLQRRPRPASPACRSSSASSSSCTPSSPRSPACSPRRRPSSSSWPSRWPRPPA 213
Query: 398 ATACTSTHRSAASRSCTTLSRSCKRWRLTRPVRQTSP-SPLGRCPRR*RSTAAS 556
+T+ T S ASR+ R +RP ++ P SP C R RS+A+S
Sbjct: 214 STSRTYRPTSTASRT--------TRCSTSRPGARSPPRSPRTACSRSRRSSASS 259
>pir||A61183 hypothetical protein (sdsB region) - Pseudomonas sp
Length = 312
Score = 48.1 bits (113), Expect = 1e-04
Identities = 67/218 (30%), Positives = 77/218 (34%), Gaps = 30/218 (13%)
Frame = +3
Query: 114 PQHRGQVRRNSTAASPGLPLLDAEHPTLQGGGEGSLRRARDCGCGVKIQDGDLVEPRPAA 293
PQH G R PGLP P G G R R G G + P PA
Sbjct: 39 PQHPGPGER------PGLP------PAGPGAAPGEPDRPRPAGAGTR--------PAPAG 78
Query: 294 GRQHAMHVRLRSRWQPG----AVLCSHEPRRC----GGGDSRQRLP------AHQHTARP 431
R A L + QPG A C PRR G G R+ P H+H +P
Sbjct: 79 RRPRAAQCGLPAG-QPGQRRTAPGCRPLPRRPPGAPGAGALRRGTPRGAGAIGHRHLVQP 137
Query: 432 HQ---GRAPHS---------QGPASGGGLRAQCAK----PLHRPWAGVQGVDAQRQLPEQ 563
GR P + + PA+GG AQ A+ P P AG A P
Sbjct: 138 APAPAGRCPGAVRGRCAGTARRPAAGGHAAAQLARGDFLPTGAPAAGPAPAPADGGRPGS 197
Query: 564 CDCVPGLHPEARRPFTDAGWRSGSQGAGGHVPRHWSGA 677
G HP ARR G G + A GH R GA
Sbjct: 198 LPA--GRHPGARRGGAGPGAVGGKRPAAGHRMRQLHGA 233
>ref|ZP_00141778.1| COG0028: Thiamine pyrophosphate-requiring enzymes [acetolactate
synthase, pyruvate dehydrogenase (cytochrome),
glyoxylate carboligase, phosphonopyruvate decarboxylase]
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 592
Score = 43.5 bits (101), Expect = 0.003
Identities = 54/176 (30%), Positives = 61/176 (33%), Gaps = 7/176 (3%)
Frame = +3
Query: 156 SPGLPLLDAEHPTLQGGGEGSLRRARDCGCGVKI----QDGDLVEPRPAAGRQHAMHVRL 323
+PG P P Q G + R R G G+ + Q P R H
Sbjct: 361 APGQPA----RPARQRGRP--VHRRRRLGDGLAVASHPQQRQAPHPHQPGPRHHGQ---- 410
Query: 324 RSRWQPGAVLCSHEPRRCGGGDSRQRLPAHQHTARPHQGRAPHSQGPASGGGLRAQCAKP 503
R PGA PR G D R+R P H RP G H A G QC
Sbjct: 411 --RHAPGAGTEEGLPRAPGDLDLRRRRPGHA-ARRPADG---HPGKTADQGSGAEQCLAE 464
Query: 504 LHRPWAGVQGVDAQRQLPEQCDCVPGLHPEA---RRPFTDAGWRSGSQGAGGHVPR 662
L R +G Q P Q PGL P R P T GS+G G VPR
Sbjct: 465 LRRAGTEGRGPAGQLHRPAQ----PGLRPARRGDRLPRTQGDALRGSRGGGAGVPR 516
>ref|NP_295856.1| conserved hypothetical protein [Deinococcus radiodurans]
gi|7471338|pir||B75310 conserved hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6459930|gb|AAF11681.1|AE002048_1 conserved
hypothetical protein [Deinococcus radiodurans]
Length = 528
Score = 41.6 bits (96), Expect = 0.012
Identities = 45/167 (26%), Positives = 65/167 (37%), Gaps = 25/167 (14%)
Frame = +2
Query: 131 SQAQQHGGFARTSSFGCGTSYSSRGWRRQP---PTSTRLRLRS*NPRWRPRGTPPCCRAS 301
+QA + R +F C S RG R++P P+S R R R P G P +
Sbjct: 325 AQAHRPSSARRPCAFRCRRSKPRRGRRQRPVTRPSSHVTRRRRPATRPSPSGRRPSTPVT 384
Query: 302 ----ACHACSPTQPLAARCSSLQSRAATVRWRRLPSATACTSTHRSAASRSCTTLSRSCK 469
+ C + P R ++ + R AT R P + + R+A RS T R +
Sbjct: 385 GWWPSATGCRLSAPRRCRRATKRCRTATGCGRTSPRCGPSSGSCRAATRRSPRTSPRRAR 444
Query: 470 RWRLTRPV------------------RQTSPSPLGRCPRR*RSTAAS 556
R +RP R+T+ S G CPR ST +S
Sbjct: 445 ASRASRPTIPAPAANSASAAPPNSPTRKTNWSTPGWCPRSAASTPSS 491
>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
Length = 297
Score = 40.4 bits (93), Expect = 0.027
Identities = 51/156 (32%), Positives = 65/156 (40%), Gaps = 11/156 (7%)
Frame = +2
Query: 257 PRWRPRGTPPCCRASACHACSPTQPLAARCSSLQSRA---ATVRW--RRLP----SATAC 409
PRW R S C AC+P + + + SRA +T W RR +A A
Sbjct: 152 PRWT--------RTSTCGACAPARAPGSTWTRACSRACATSTPCWSTRRATLARGAAGAT 203
Query: 410 TSTHRSAASRSCTTLSRSCKRWRLTRPVRQTSPSPLGRCPRR*RSTAAS*AV*LCSRTSS 589
T R A++R C T SRS + R T+PS R P R+ S S T +
Sbjct: 204 TGGARRASTRPCATASRS-----TSSAARATAPS--SRTPSSARTRRPS------SATGA 250
Query: 590 GSASTFHRCRVAFWITGRWWPCTAPLVRCAA--STW 691
G+ S RC W R WP RCA+ STW
Sbjct: 251 GARS---RCTRGRWT--RSWPSCC---RCASPPSTW 278
