Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000198A_C02 KCC000198A_c02
(1844 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P54774|CC48_SOYBN Cell division cycle protein 48 homolog (Val... 599 0.0
ref|NP_187595.1| transitional endoplasmic reticulum ATPase -rela... 596 0.0
ref|NP_190891.1| CDC48 - like protein [Arabidopsis thaliana] gi|... 598 0.0
ref|NP_568114.1| transitional endoplasmic reticulum ATPase -rela... 595 0.0
pir||T48355 transitional endoplasmic reticulum ATPase - Arabidop... 595 0.0
>sp|P54774|CC48_SOYBN Cell division cycle protein 48 homolog (Valosin containing protein
homolog) (VCP) gi|7435757|pir||T06409 valosin-containing
protein - soybean gi|862480|gb|AAA80587.1|
valosin-containing protein
Length = 807
Score = 599 bits (1544), Expect(2) = 0.0
Identities = 298/325 (91%), Positives = 312/325 (95%)
Frame = +1
Query: 868 KQLAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVN 1047
KQ+AQIRELVELPLRHPQLFK+IGVKPPKGILLYGPPGSGKTLIARAVANETGAFF +N
Sbjct: 215 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 274
Query: 1048 GPEIMSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGEVERRIVSQLLT 1227
GPEIMSKLAGESESNLRK F+EAEKNAPSIIFIDE+DSIAPKREKT GEVERRIVSQLLT
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLT 334
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
LMDGLKSRAHVIVI ATNRPNSIDPALRRFGRFDREIDIGVPDE GRLEV+RIHTKNMKL
Sbjct: 335 LMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKL 394
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
+DV+LE I++DTHGYVGADLAALCTEAALQCIREKMDVIDLEDE IDAEVLNSMAVT +
Sbjct: 395 SDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNE 454
Query: 1588 HFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSP 1767
HF+TALG SNPSALRETVVEVPNVSW+ IGGLENVKRELQE +QYPVEHPEKFEKFGMSP
Sbjct: 455 HFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
Query: 1768 SKGVLFYGPPGCGKTLLAKAIANEC 1842
SKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANEC 539
Score = 365 bits (937), Expect(2) = 0.0
Identities = 169/212 (79%), Positives = 194/212 (90%)
Frame = +3
Query: 228 STSADASKKDANKKDFSTAIMDRKKSPNRLIVEEAVNDDNSVVALHPKTMEKLQLFRGDT 407
S ++S + KKDFSTAI++RKKSPNRL+V+EAVNDDNSVV +HP+TMEKLQLFRGDT
Sbjct: 2 SQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGDT 61
Query: 408 VLLKGKKRKDTVCIVLSDDTVDENKIRMNKVVRKNLRVRLADIVSVHQCTDVKYGKRIHV 587
+L+KGKKRKDT+CI L+D+ +E KIRMNKVVR NLRVRL D+VSVHQC DVKYGKR+H+
Sbjct: 62 ILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHI 121
Query: 588 LPIDDTIEGISGNLFDAYLKPYFLEAYRPVRKGDTFLARGGMRSVEFKVVETDPAEYCIV 767
LPIDDTIEG++GNLFDA+LKPYFLEAYRPVRKGD FL RGGMRSVEFKVVETDP EYC+V
Sbjct: 122 LPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVV 181
Query: 768 APDTEIFCEGEPIKREDEEKLDEVGYDDIGGV 863
APDTEIFCEGEP+KREDEE+LDEVGYDD+GGV
Sbjct: 182 APDTEIFCEGEPLKREDEERLDEVGYDDVGGV 213
Score = 199 bits (507), Expect = 1e-49
Identities = 101/239 (42%), Positives = 159/239 (66%), Gaps = 3/239 (1%)
Frame = +1
Query: 880 QIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVNGPEI 1059
+++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F+ V GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
Query: 1060 MSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGE---VERRIVSQLLTL 1230
++ GESE+N+R++F +A ++AP ++F DE+DSIA +R + G+ R+++QLLT
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTE 611
Query: 1231 MDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKLD 1410
MDG+ ++ V +I ATNRP+ IDPAL R GR D+ I I +PDE R ++ + + +
Sbjct: 612 MDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIA 671
Query: 1411 EDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
++V+L A++R T G+ GAD+ +C A IRE ++ D+E E+ E N A+ +D
Sbjct: 672 KNVDLRALARHTQGFSGADITEICQRACKYAIRENIEK-DIERERKSRE--NPEAMDED 727
Score = 77.0 bits (188), Expect = 1e-12
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +1
Query: 1630 RETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 1809
RE + V +D +GG+ +++EL++ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
Query: 1810 TLLAKAIANE 1839
TL+A+A+ANE
Sbjct: 256 TLIARAVANE 265
>ref|NP_187595.1| transitional endoplasmic reticulum ATPase -related [Arabidopsis
thaliana] gi|1705677|sp|P54609|C48A_ARATH Cell division
control protein 48 homolog A (AtCDC48a)
gi|2118115|pir||S60112 transitional endoplasmic reticulum
ATPase - Arabidopsis thaliana gi|1019904|gb|AAC49120.1|
cell division cycle protein
gi|6681343|gb|AAF23260.1|AC015985_18 putative
transitional endoplasmic reticulum ATPase [Arabidopsis
thaliana] gi|17473551|gb|AAL38252.1| putative
transitional endoplasmic reticulum ATPase [Arabidopsis
thaliana] gi|20453130|gb|AAM19807.1| AT3g09840/F8A24_11
[Arabidopsis thaliana]
Length = 809
Score = 596 bits (1537), Expect(2) = 0.0
Identities = 297/325 (91%), Positives = 311/325 (95%)
Frame = +1
Query: 868 KQLAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVN 1047
KQ+AQIRELVELPLRHPQLFK+IGVKPPKGILLYGPPGSGKTLIARAVANETGAFF +N
Sbjct: 214 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 273
Query: 1048 GPEIMSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGEVERRIVSQLLT 1227
GPEIMSKLAGESESNLRK F+EAEKNAPSIIFIDE+DSIAPKREKT GEVERRIVSQLLT
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLT 333
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
LMDGLKSRAHVIV+ ATNRPNSIDPALRRFGRFDREIDIGVPDE GRLEV+RIHTKNMKL
Sbjct: 334 LMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKL 393
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
EDV+LE IS+DTHGYVGADLAALCTEAALQCIREKMDVIDLED+ IDAE+LNSMAVT +
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNE 453
Query: 1588 HFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSP 1767
HF TALG SNPSALRETVVEVPNVSW+ IGGLENVKRELQE +QYPVEHPEKFEKFGMSP
Sbjct: 454 HFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513
Query: 1768 SKGVLFYGPPGCGKTLLAKAIANEC 1842
SKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANEC 538
Score = 367 bits (943), Expect(2) = 0.0
Identities = 170/212 (80%), Positives = 198/212 (93%)
Frame = +3
Query: 228 STSADASKKDANKKDFSTAIMDRKKSPNRLIVEEAVNDDNSVVALHPKTMEKLQLFRGDT 407
ST A++S + KKDFSTAI++RKKSPNRL+V+EA+NDDNSVV+LHP TMEKLQLFRGDT
Sbjct: 2 STPAESSDSKS-KKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT 60
Query: 408 VLLKGKKRKDTVCIVLSDDTVDENKIRMNKVVRKNLRVRLADIVSVHQCTDVKYGKRIHV 587
+L+KGKKRKDTVCI L+D+T +E KIRMNKVVR NLRVRL D++SVHQC DVKYGKR+H+
Sbjct: 61 ILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI 120
Query: 588 LPIDDTIEGISGNLFDAYLKPYFLEAYRPVRKGDTFLARGGMRSVEFKVVETDPAEYCIV 767
LP+DDT+EG++GNLFDAYLKPYFLEAYRPVRKGD FL RGGMRSVEFKV+ETDPAEYC+V
Sbjct: 121 LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV 180
Query: 768 APDTEIFCEGEPIKREDEEKLDEVGYDDIGGV 863
APDTEIFCEGEP+KREDEE+LD+VGYDD+GGV
Sbjct: 181 APDTEIFCEGEPVKREDEERLDDVGYDDVGGV 212
Score = 194 bits (494), Expect = 3e-48
Identities = 100/240 (41%), Positives = 157/240 (64%), Gaps = 4/240 (1%)
Frame = +1
Query: 880 QIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVNGPEI 1059
+++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F+ V GPE+
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 1060 MSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQ----GEVERRIVSQLLT 1227
++ GESE+N+R++F +A ++AP ++F DE+DSIA +R G R+++QLLT
Sbjct: 551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLT 610
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
MDG+ ++ V +I ATNRP+ ID AL R GR D+ I I +PDE RL + + + +
Sbjct: 611 EMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPI 670
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
+DV++ A+++ T G+ GAD+ +C A IRE ++ D+E E+ +E N A+ +D
Sbjct: 671 AKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEK-DIEKEKRRSE--NPEAMEED 727
Score = 79.3 bits (194), Expect = 2e-13
Identities = 68/277 (24%), Positives = 122/277 (43%), Gaps = 17/277 (6%)
Frame = +1
Query: 1060 MSKLAGESESNLRKVFQEA---EKNAPSIIFIDEV----DSIAPKREKTQGEVERRIVSQ 1218
MS A S+S +K F A K +P+ + +DE +S+ T +++ +
Sbjct: 1 MSTPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQ--LFRG 58
Query: 1219 LLTLMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHT-K 1395
L+ G K + V + A + + R + + +G +V+ +H
Sbjct: 59 DTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLG--------DVISVHQCP 110
Query: 1396 NMKLDEDVNLEAISRDTHGYVGADLAALCTEAALQCIR--EKMDVI-------DLEDEQI 1548
++K + V++ + G G A L+ R K D+ +E + I
Sbjct: 111 DVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVI 170
Query: 1549 DAEVLNSMAVTQDHFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPV 1728
+ + V D T + RE + +V +D +GG+ +++EL++ P+
Sbjct: 171 ETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPL 227
Query: 1729 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 1839
HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE
Sbjct: 228 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
>ref|NP_190891.1| CDC48 - like protein [Arabidopsis thaliana]
gi|28201772|sp|Q9SCN8|C48D_ARATH Putative cell division
control protein 48 homolog D (AtCDC48d) (Transitional
endoplasmic reticulum ATPase D) gi|11265359|pir||T46169
CDC48-like protein - Arabidopsis thaliana
gi|6630743|emb|CAB64226.1| CDC48-like protein
[Arabidopsis thaliana]
Length = 815
Score = 598 bits (1541), Expect(2) = 0.0
Identities = 296/325 (91%), Positives = 313/325 (96%)
Frame = +1
Query: 868 KQLAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVN 1047
KQ+AQIRELVELPLRHPQLFK+IGVKPPKGILLYGPPGSGKTLIARAVANETGAFF +N
Sbjct: 215 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 274
Query: 1048 GPEIMSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGEVERRIVSQLLT 1227
GPEIMSKLAGESESNLRK F+EAEKNAPSIIFIDE+DSIAPKREKT GEVERRIVSQLLT
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLT 334
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
LMDGLKSRAHVIV+ ATNRPNSIDPALRRFGRFDREIDIGVPDE GRLEV+RIHTKNMKL
Sbjct: 335 LMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKL 394
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
EDV+LE +S+DTHGYVGADLAALCTEAALQCIREKMDVIDL+DE+IDAE+LNSMAV+ D
Sbjct: 395 AEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSND 454
Query: 1588 HFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSP 1767
HF+TALG SNPSALRETVVEVPNVSW+ IGGLENVKRELQE +QYPVEHPEKFEKFGMSP
Sbjct: 455 HFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
Query: 1768 SKGVLFYGPPGCGKTLLAKAIANEC 1842
SKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANEC 539
Score = 365 bits (936), Expect(2) = 0.0
Identities = 167/212 (78%), Positives = 194/212 (90%)
Frame = +3
Query: 228 STSADASKKDANKKDFSTAIMDRKKSPNRLIVEEAVNDDNSVVALHPKTMEKLQLFRGDT 407
+ A++S KKDFSTAI+++KK+ NRL+V+EA+NDDNSVV+LHP TMEKLQLFRGDT
Sbjct: 2 ANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDT 61
Query: 408 VLLKGKKRKDTVCIVLSDDTVDENKIRMNKVVRKNLRVRLADIVSVHQCTDVKYGKRIHV 587
+L+KGKKRKDTVCI L+D+T DE KIRMNKVVR NLRVRL D++SVHQC DVKYG R+H+
Sbjct: 62 ILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHI 121
Query: 588 LPIDDTIEGISGNLFDAYLKPYFLEAYRPVRKGDTFLARGGMRSVEFKVVETDPAEYCIV 767
LP+DDTIEG+SGN+FDAYLKPYFLEAYRPVRKGD FL RGGMRS+EFKV+ETDPAEYC+V
Sbjct: 122 LPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVV 181
Query: 768 APDTEIFCEGEPIKREDEEKLDEVGYDDIGGV 863
APDTEIFCEGEPIKREDEE+LDEVGYDD+GGV
Sbjct: 182 APDTEIFCEGEPIKREDEERLDEVGYDDVGGV 213
Score = 199 bits (506), Expect = 1e-49
Identities = 98/234 (41%), Positives = 157/234 (66%), Gaps = 3/234 (1%)
Frame = +1
Query: 880 QIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVNGPEI 1059
+++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F+ + GPE+
Sbjct: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 551
Query: 1060 MSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGE---VERRIVSQLLTL 1230
++ GESE+N+R++F +A ++AP ++F DE+DSIA +R + G+ R+++QLLT
Sbjct: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTE 611
Query: 1231 MDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKLD 1410
MDG+ ++ V +I ATNRP+ IDPAL R GR D+ I I +PDE R ++ + + +
Sbjct: 612 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVA 671
Query: 1411 EDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSM 1572
+DV+L A+++ T G+ GAD+ +C + IRE ++ D+E E+ AE +M
Sbjct: 672 KDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEK-DIEKERKRAESPEAM 724
Score = 77.0 bits (188), Expect = 1e-12
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +1
Query: 1630 RETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 1809
RE + V +D +GG+ +++EL++ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
Query: 1810 TLLAKAIANE 1839
TL+A+A+ANE
Sbjct: 256 TLIARAVANE 265
>ref|NP_568114.1| transitional endoplasmic reticulum ATPase -related [Arabidopsis
thaliana] gi|28201771|sp|Q9LZF6|C48E_ARATH Cell division
control protein 48 homolog E (AtCDC48e) (Transitional
endoplasmic reticulum ATPase E)
gi|26449352|dbj|BAC41803.1| putative transitional
endoplasmic reticulum ATPase [Arabidopsis thaliana]
gi|26452166|dbj|BAC43171.1| putative transitional
endoplasmic reticulum ATPase [Arabidopsis thaliana]
gi|30102750|gb|AAP21293.1| At5g03340 [Arabidopsis
thaliana]
Length = 810
Score = 595 bits (1534), Expect(2) = 0.0
Identities = 296/325 (91%), Positives = 311/325 (95%)
Frame = +1
Query: 868 KQLAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVN 1047
KQ+AQIRELVELPLRHPQLFK+IGVKPPKGILLYGPPGSGKTLIARAVANETGAFF +N
Sbjct: 214 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 273
Query: 1048 GPEIMSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGEVERRIVSQLLT 1227
GPEIMSKLAGESESNLRK F+EAEKNAPSIIFIDE+DSIAPKREKT GEVERRIVSQLLT
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLT 333
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
LMDGLKSRAHVIV+ ATNRPNSIDPALRRFGRFDREIDIGVPDE GRLEV+RIHTKNMKL
Sbjct: 334 LMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKL 393
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
EDV+LE IS+DTHGYVGADLAALCTEAALQCIREKMDVIDLED+ IDAE+LNSMAV+ +
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNE 453
Query: 1588 HFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSP 1767
HF TALG SNPSALRETVVEVPNVSW+ IGGLENVKRELQE +QYPVEHPEKFEKFGMSP
Sbjct: 454 HFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513
Query: 1768 SKGVLFYGPPGCGKTLLAKAIANEC 1842
SKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANEC 538
Score = 367 bits (942), Expect(2) = 0.0
Identities = 168/206 (81%), Positives = 192/206 (92%)
Frame = +3
Query: 246 SKKDANKKDFSTAIMDRKKSPNRLIVEEAVNDDNSVVALHPKTMEKLQLFRGDTVLLKGK 425
S KKDFSTAI++RKKSPNRL+V+EA+NDDNSVV+LHP TMEKLQLFRGDT+L+KGK
Sbjct: 7 SSDSKTKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGK 66
Query: 426 KRKDTVCIVLSDDTVDENKIRMNKVVRKNLRVRLADIVSVHQCTDVKYGKRIHVLPIDDT 605
KRKDTVCI L+D+T +E KIRMNKVVR NLRVRL D++SVHQC DVKYGKR+H+LP+DDT
Sbjct: 67 KRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDT 126
Query: 606 IEGISGNLFDAYLKPYFLEAYRPVRKGDTFLARGGMRSVEFKVVETDPAEYCIVAPDTEI 785
+EG++GNLFDAYLKPYFLEAYRPVRKGD FL RGGMRSVEFKV+ETDPAEYC+VAPDTEI
Sbjct: 127 VEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEI 186
Query: 786 FCEGEPIKREDEEKLDEVGYDDIGGV 863
FCEGEP+KREDEE+LDEVGYDD+GGV
Sbjct: 187 FCEGEPVKREDEERLDEVGYDDVGGV 212
Score = 197 bits (500), Expect = 7e-49
Identities = 96/225 (42%), Positives = 153/225 (67%), Gaps = 3/225 (1%)
Frame = +1
Query: 880 QIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVNGPEI 1059
+++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F+ V GPE+
Sbjct: 491 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 550
Query: 1060 MSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGE---VERRIVSQLLTL 1230
++ GESE+N+R++F +A ++AP ++F DE+DSIA +R + G+ R+++QLLT
Sbjct: 551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTE 610
Query: 1231 MDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKLD 1410
MDG+ ++ V +I ATNRP+ ID AL R GR D+ I I +PDE RL + + + +
Sbjct: 611 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVA 670
Query: 1411 EDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQ 1545
+DV++ A+++ T G+ GAD+ +C A IRE ++ D+E+E+
Sbjct: 671 KDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEK-DIENER 714
Score = 77.8 bits (190), Expect = 6e-13
Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 17/277 (6%)
Frame = +1
Query: 1060 MSKLAGESESNLRKVFQEA---EKNAPSIIFIDEV----DSIAPKREKTQGEVERRIVSQ 1218
MS S+S +K F A K +P+ + +DE +S+ T +++ +
Sbjct: 1 MSNEPESSDSKTKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQ--LFRG 58
Query: 1219 LLTLMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHT-K 1395
L+ G K + V + A + + R + + +G +V+ +H
Sbjct: 59 DTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLG--------DVISVHQCP 110
Query: 1396 NMKLDEDVNLEAISRDTHGYVGADLAALCTEAALQCIR--EKMDVI-------DLEDEQI 1548
++K + V++ + G G A L+ R K D+ +E + I
Sbjct: 111 DVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVI 170
Query: 1549 DAEVLNSMAVTQDHFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPV 1728
+ + V D T + RE + V +D +GG+ +++EL++ P+
Sbjct: 171 ETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPL 227
Query: 1729 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 1839
HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE
Sbjct: 228 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
>pir||T48355 transitional endoplasmic reticulum ATPase - Arabidopsis thaliana
gi|7378614|emb|CAB83290.1| transitional endoplasmic
reticulum ATPase [Arabidopsis thaliana]
Length = 843
Score = 595 bits (1534), Expect(2) = 0.0
Identities = 296/325 (91%), Positives = 311/325 (95%)
Frame = +1
Query: 868 KQLAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVN 1047
KQ+AQIRELVELPLRHPQLFK+IGVKPPKGILLYGPPGSGKTLIARAVANETGAFF +N
Sbjct: 247 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 306
Query: 1048 GPEIMSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGEVERRIVSQLLT 1227
GPEIMSKLAGESESNLRK F+EAEKNAPSIIFIDE+DSIAPKREKT GEVERRIVSQLLT
Sbjct: 307 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLT 366
Query: 1228 LMDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKL 1407
LMDGLKSRAHVIV+ ATNRPNSIDPALRRFGRFDREIDIGVPDE GRLEV+RIHTKNMKL
Sbjct: 367 LMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKL 426
Query: 1408 DEDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQIDAEVLNSMAVTQD 1587
EDV+LE IS+DTHGYVGADLAALCTEAALQCIREKMDVIDLED+ IDAE+LNSMAV+ +
Sbjct: 427 AEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNE 486
Query: 1588 HFKTALGMSNPSALRETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSP 1767
HF TALG SNPSALRETVVEVPNVSW+ IGGLENVKRELQE +QYPVEHPEKFEKFGMSP
Sbjct: 487 HFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 546
Query: 1768 SKGVLFYGPPGCGKTLLAKAIANEC 1842
SKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 547 SKGVLFYGPPGCGKTLLAKAIANEC 571
Score = 366 bits (940), Expect(2) = 0.0
Identities = 167/200 (83%), Positives = 191/200 (95%)
Frame = +3
Query: 264 KKDFSTAIMDRKKSPNRLIVEEAVNDDNSVVALHPKTMEKLQLFRGDTVLLKGKKRKDTV 443
KKDFSTAI++RKKSPNRL+V+EA+NDDNSVV+LHP TMEKLQLFRGDT+L+KGKKRKDTV
Sbjct: 46 KKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGKKRKDTV 105
Query: 444 CIVLSDDTVDENKIRMNKVVRKNLRVRLADIVSVHQCTDVKYGKRIHVLPIDDTIEGISG 623
CI L+D+T +E KIRMNKVVR NLRVRL D++SVHQC DVKYGKR+H+LP+DDT+EG++G
Sbjct: 106 CIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTG 165
Query: 624 NLFDAYLKPYFLEAYRPVRKGDTFLARGGMRSVEFKVVETDPAEYCIVAPDTEIFCEGEP 803
NLFDAYLKPYFLEAYRPVRKGD FL RGGMRSVEFKV+ETDPAEYC+VAPDTEIFCEGEP
Sbjct: 166 NLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEP 225
Query: 804 IKREDEEKLDEVGYDDIGGV 863
+KREDEE+LDEVGYDD+GGV
Sbjct: 226 VKREDEERLDEVGYDDVGGV 245
Score = 197 bits (500), Expect = 7e-49
Identities = 96/225 (42%), Positives = 153/225 (67%), Gaps = 3/225 (1%)
Frame = +1
Query: 880 QIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFVVVNGPEI 1059
+++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F+ V GPE+
Sbjct: 524 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 583
Query: 1060 MSKLAGESESNLRKVFQEAEKNAPSIIFIDEVDSIAPKREKTQGE---VERRIVSQLLTL 1230
++ GESE+N+R++F +A ++AP ++F DE+DSIA +R + G+ R+++QLLT
Sbjct: 584 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTE 643
Query: 1231 MDGLKSRAHVIVIAATNRPNSIDPALRRFGRFDREIDIGVPDETGRLEVMRIHTKNMKLD 1410
MDG+ ++ V +I ATNRP+ ID AL R GR D+ I I +PDE RL + + + +
Sbjct: 644 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVA 703
Query: 1411 EDVNLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDEQ 1545
+DV++ A+++ T G+ GAD+ +C A IRE ++ D+E+E+
Sbjct: 704 KDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEK-DIENER 747
Score = 77.0 bits (188), Expect = 1e-12
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +1
Query: 1630 RETVVEVPNVSWDAIGGLENVKRELQELIQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 1809
RE + V +D +GG+ +++EL++ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 228 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 287
Query: 1810 TLLAKAIANE 1839
TL+A+A+ANE
Sbjct: 288 TLIARAVANE 297
