Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000188A_C01 KCC000188A_c01
(718 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA78592.1| 40S ribosomal protein S9 [Chlamydomonas sp. HS-5] 205 1e-85
ref|NP_198801.1| 40S ribosomal protein S9 (RPS9C) [Arabidopsis t... 196 3e-82
ref|NP_197024.1| 40S ribosomal protein S9 (RPS9B) [Arabidopsis t... 194 1e-80
sp|P52810|RS9_PODAN 40S ribosomal protein S9 (S7) gi|1321917|emb... 185 1e-72
ref|XP_329139.1| hypothetical protein [Neurospora crassa] gi|289... 181 2e-71
>dbj|BAA78592.1| 40S ribosomal protein S9 [Chlamydomonas sp. HS-5]
Length = 192
Score = 205 bits (521), Expect(2) = 1e-85
Identities = 102/118 (86%), Positives = 108/118 (91%), Gaps = 2/118 (1%)
Frame = +3
Query: 243 GNALMRRMNRYGLLNESQDKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHHARVLIRQR 422
G ALMRRM +YGLLNE+QDKLDYVLAL P DFLERRLQT+VFKQGLAKSIHHARVLI+Q
Sbjct: 75 GQALMRRMYKYGLLNETQDKLDYVLALQPNDFLERRLQTVVFKQGLAKSIHHARVLIKQN 134
Query: 423 HIRVGKQVVNVPSFMVRVDSQKHIDFALTSPFGGGRPGRVKRKNAKK--GGDGGEDDE 590
HIRVGKQVVN+PSFMVRVDSQKH+DFALTSPFGGGRPGR KRKNA K GG GGEDDE
Sbjct: 135 HIRVGKQVVNIPSFMVRVDSQKHVDFALTSPFGGGRPGRCKRKNAGKGAGGGGGEDDE 192
Score = 134 bits (337), Expect(2) = 1e-85
Identities = 65/75 (86%), Positives = 68/75 (90%)
Frame = +2
Query: 20 MPKIGFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQMVLSKIRNAARV 199
MPKIG YRNYGKTFKKPRRP+EKERLD ELKLVGEYGLRNKRELWRVQM+LSKIRNAAR
Sbjct: 1 MPKIGQYRNYGKTFKKPRRPFEKERLDGELKLVGEYGLRNKRELWRVQMILSKIRNAARN 60
Query: 200 LLTLDEKDPKRIFEG 244
LL DE D KR+FEG
Sbjct: 61 LLQHDEDDTKRLFEG 75
>ref|NP_198801.1| 40S ribosomal protein S9 (RPS9C) [Arabidopsis thaliana]
gi|10176977|dbj|BAB10209.1| 40S ribosomal protein S9
[Arabidopsis thaliana] gi|21593688|gb|AAM65655.1| 40S
ribosomal protein S9-like [Arabidopsis thaliana]
Length = 197
Score = 196 bits (497), Expect(2) = 3e-82
Identities = 98/130 (75%), Positives = 114/130 (87%), Gaps = 6/130 (4%)
Frame = +3
Query: 219 RTPSVSSRGNALMRRMNRYGLLNESQDKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHH 398
+ P G AL+RRMNRYGLL+E+Q+KLDYVLALT ++FLERRLQT+VFK G+AKSIHH
Sbjct: 67 KNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHH 126
Query: 399 ARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFALTSPFGGGRPGRVKRKN----AKK- 563
ARVLIRQRHIRVG+Q+VN+PSFMVRV+SQKH+DF+LTSPFGGGRPGRVKR+N AKK
Sbjct: 127 ARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNERAGAKKA 186
Query: 564 -GGDGGEDDE 590
GGDG EDDE
Sbjct: 187 SGGDGDEDDE 196
Score = 132 bits (332), Expect(2) = 3e-82
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = +2
Query: 20 MPKIGFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQMVLSKIRNAARV 199
M + FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQ LS+IRNAAR
Sbjct: 1 MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60
Query: 200 LLTLDEKDPKRIFEG 244
LLTLDEK+P+RIFEG
Sbjct: 61 LLTLDEKNPRRIFEG 75
>ref|NP_197024.1| 40S ribosomal protein S9 (RPS9B) [Arabidopsis thaliana]
gi|11276530|pir||T49955 40S ribosomal protein-like -
Arabidopsis thaliana gi|7671489|emb|CAB89330.1| 40S
ribosomal protein-like [Arabidopsis thaliana]
Length = 198
Score = 194 bits (493), Expect(2) = 1e-80
Identities = 97/131 (74%), Positives = 111/131 (84%), Gaps = 7/131 (5%)
Frame = +3
Query: 219 RTPSVSSRGNALMRRMNRYGLLNESQDKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHH 398
++P G AL+RRMNRYGLL+ESQ+KLDYVLALT ++FLERRLQT+VFK G+AKSIHH
Sbjct: 67 KSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHH 126
Query: 399 ARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFALTSPFGGGRPGRVKRKNAKK----- 563
+RVLIRQRHIRVGKQ+VN+PSFMVR+DSQKHIDFALTSPFGGGRPGRVKR+N K
Sbjct: 127 SRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEKSASKKA 186
Query: 564 --GGDGGEDDE 590
GGD DDE
Sbjct: 187 SGGGDADGDDE 197
Score = 128 bits (322), Expect(2) = 1e-80
Identities = 62/75 (82%), Positives = 67/75 (88%)
Frame = +2
Query: 20 MPKIGFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQMVLSKIRNAARV 199
M + +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLRNKRELWRVQ LS+IRNAAR
Sbjct: 1 MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60
Query: 200 LLTLDEKDPKRIFEG 244
LLTLDEK P+RIFEG
Sbjct: 61 LLTLDEKSPRRIFEG 75
>sp|P52810|RS9_PODAN 40S ribosomal protein S9 (S7) gi|1321917|emb|CAA65433.1|
cytoplasmic ribosomal protein S7 [Podospora anserina]
Length = 190
Score = 185 bits (470), Expect(2) = 1e-72
Identities = 96/127 (75%), Positives = 110/127 (86%), Gaps = 3/127 (2%)
Frame = +3
Query: 219 RTPSVSSRGNALMRRMNRYGLLNESQDKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHH 398
+ P GNAL+RR+ R G+L+ES+ KLDYVLAL +DFLERRLQTLV+K GLAKSIHH
Sbjct: 63 KDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHH 122
Query: 399 ARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFALTSPFGGGRPGRVKRKNAK--KGGD 572
ARVLIRQRHIRVGKQ+VNVPSF+VR+DSQKHIDFALTSPFGGGRPGRV+RK AK +GGD
Sbjct: 123 ARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKKAKAAEGGD 182
Query: 573 G-GEDDE 590
G E+DE
Sbjct: 183 GDAEEDE 189
Score = 110 bits (275), Expect(2) = 1e-72
Identities = 53/68 (77%), Positives = 59/68 (85%)
Frame = +2
Query: 41 RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQMVLSKIRNAARVLLTLDEK 220
R+Y KT K PRRP+E RLD+ELKLVGEYGLRNKRE+WRV + LSKIR AAR LLTLDEK
Sbjct: 4 RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63
Query: 221 DPKRIFEG 244
DPKR+FEG
Sbjct: 64 DPKRLFEG 71
>ref|XP_329139.1| hypothetical protein [Neurospora crassa] gi|28926006|gb|EAA34997.1|
hypothetical protein [Neurospora crassa]
Length = 190
Score = 181 bits (460), Expect(2) = 2e-71
Identities = 91/126 (72%), Positives = 108/126 (85%), Gaps = 2/126 (1%)
Frame = +3
Query: 219 RTPSVSSRGNALMRRMNRYGLLNESQDKLDYVLALTPQDFLERRLQTLVFKQGLAKSIHH 398
+ P GNAL+RR+ R G+L+ES+ KLDYVLAL +DFLERRLQT V+K GLAKSIHH
Sbjct: 63 KDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTCVYKLGLAKSIHH 122
Query: 399 ARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFALTSPFGGGRPGRVKRKNAK--KGGD 572
ARVLIRQRHIRVGKQ+VNVPSF+VR+DSQKHIDFALTSPFGGGRPGRV+RK AK +GG+
Sbjct: 123 ARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKKAKAAEGGE 182
Query: 573 GGEDDE 590
E+++
Sbjct: 183 AAEEED 188
Score = 110 bits (275), Expect(2) = 2e-71
Identities = 53/68 (77%), Positives = 59/68 (85%)
Frame = +2
Query: 41 RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQMVLSKIRNAARVLLTLDEK 220
R+Y KT K PRRP+E RLD+ELKLVGEYGLRNKRE+WRV + LSKIR AAR LLTLDEK
Sbjct: 4 RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARQLLTLDEK 63
Query: 221 DPKRIFEG 244
DPKR+FEG
Sbjct: 64 DPKRLFEG 71
