Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000173A_C01 KCC000173A_c01
(1095 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186857.1| 40S ribosomal protein S19 (RPS19A) [Arabidopsis... 187 4e-46
ref|NP_197056.1| 40S ribosomal protein S19 (RPS19B) [Arabidopsis... 183 4e-45
ref|NP_200925.1| 40S ribosomal protein S19 (RPS19C) [Arabidopsis... 179 8e-44
sp|P40978|RS19_ORYSA 40S RIBOSOMAL PROTEIN S19 gi|30089738|gb|AA... 174 2e-42
gb|AAN39006.1| putative 40S ribosomal protein S19 [Griffithsia j... 155 2e-36
>ref|NP_186857.1| 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana]
gi|27923843|sp|Q9SGA6|R191_ARATH 40S ribosomal protein
S19-1 gi|6513924|gb|AAF14828.1|AC011664_10 putative 40S
ribosomal protein S19 [Arabidopsis thaliana]
gi|13878029|gb|AAK44092.1|AF370277_1 putative 40S
ribosomal protein S19 [Arabidopsis thaliana]
gi|17104595|gb|AAL34186.1| putative 40S ribosomal
protein S19 [Arabidopsis thaliana]
gi|21593712|gb|AAM65679.1| putative 40S ribosomal
protein S19 [Arabidopsis thaliana]
Length = 143
Score = 187 bits (474), Expect = 4e-46
Identities = 86/139 (61%), Positives = 113/139 (80%)
Frame = +1
Query: 157 KSVKDVPAEDFIKAYAAHLKANDKIQLPSWVDVVKTGKFKELAPYDPDWYYVRAASVARK 336
K+VKDV DF+KAYA+HLK + KI+LP+W D+VKTGK KELAPYDPDWYY+RAAS+ARK
Sbjct: 5 KTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARK 64
Query: 337 LYIRQGMGVGLFRTQYGGRNKRRGSKPEFQSKASGGLVRHIMKQLEECGLMEKAPEKGRR 516
+Y+R G+GVG FR YGG +KR GS+P K+SGG+ RHI++QLE ++E + GRR
Sbjct: 65 VYLRGGLGVGAFRRIYGG-SKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRR 123
Query: 517 LTANGQRDMDQIAGRITVQ 573
+T++GQRD+DQ+AGRI V+
Sbjct: 124 ITSSGQRDLDQVAGRIAVE 142
>ref|NP_197056.1| 40S ribosomal protein S19 (RPS19B) [Arabidopsis thaliana]
gi|27923841|sp|Q9LF30|R192_ARATH 40S ribosomal protein
S19-2 gi|11276633|pir||T51530 40S RIBOSOMAL PROTEIN
S19-like - Arabidopsis thaliana
gi|9755807|emb|CAC01751.1| 40S RIBOSOMAL PROTEIN
S19-like [Arabidopsis thaliana]
gi|21554401|gb|AAM63506.1| 40S ribosomal protein
S19-like [Arabidopsis thaliana]
gi|28466827|gb|AAO44022.1| At5g15520 [Arabidopsis
thaliana]
Length = 143
Score = 183 bits (465), Expect = 4e-45
Identities = 84/139 (60%), Positives = 111/139 (79%)
Frame = +1
Query: 157 KSVKDVPAEDFIKAYAAHLKANDKIQLPSWVDVVKTGKFKELAPYDPDWYYVRAASVARK 336
K+VKDV DF+KAYA+HLK + KI+LP W D+VKTG+ KELAPYDPDWYY+RAAS+ARK
Sbjct: 5 KTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARK 64
Query: 337 LYIRQGMGVGLFRTQYGGRNKRRGSKPEFQSKASGGLVRHIMKQLEECGLMEKAPEKGRR 516
+Y+R G+GVG FR YGG +KR GS+P K+SGG+ RHI++QLE ++E + GRR
Sbjct: 65 IYLRGGLGVGAFRRIYGG-SKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRR 123
Query: 517 LTANGQRDMDQIAGRITVQ 573
+T++GQRD+DQ+AGRI +
Sbjct: 124 ITSSGQRDLDQVAGRIAAE 142
>ref|NP_200925.1| 40S ribosomal protein S19 (RPS19C) [Arabidopsis thaliana]
gi|27923837|sp|Q9FNP8|R193_ARATH 40S ribosomal protein
S19-3 gi|9759463|dbj|BAB10379.1| 40S ribosomal protein
S19 [Arabidopsis thaliana] gi|34365671|gb|AAQ65147.1|
At5g61170 [Arabidopsis thaliana]
Length = 143
Score = 179 bits (454), Expect = 8e-44
Identities = 82/136 (60%), Positives = 110/136 (80%)
Frame = +1
Query: 157 KSVKDVPAEDFIKAYAAHLKANDKIQLPSWVDVVKTGKFKELAPYDPDWYYVRAASVARK 336
K+VKDV +F+KAYAAHLK + KI+LP W D+VKTGK KELAPYDPDWYY+RAAS+ARK
Sbjct: 5 KTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARK 64
Query: 337 LYIRQGMGVGLFRTQYGGRNKRRGSKPEFQSKASGGLVRHIMKQLEECGLMEKAPEKGRR 516
+Y+R G+GVG FR YGG +KR GS+P K+SGG+ RHI++QL+ +++ + GR+
Sbjct: 65 VYLRGGLGVGAFRRIYGG-SKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRK 123
Query: 517 LTANGQRDMDQIAGRI 564
+T++GQRD+DQ+AGRI
Sbjct: 124 ITSSGQRDLDQVAGRI 139
>sp|P40978|RS19_ORYSA 40S RIBOSOMAL PROTEIN S19 gi|30089738|gb|AAP20842.1| putative
ribosomal protein S19 [Oryza sativa (japonica
cultivar-group)] gi|30089751|gb|AAP20855.1| putative
ribosomal protein S19 [Oryza sativa (japonica
cultivar-group)]
Length = 146
Score = 174 bits (442), Expect = 2e-42
Identities = 79/146 (54%), Positives = 114/146 (77%)
Frame = +1
Query: 139 MASYKPKSVKDVPAEDFIKAYAAHLKANDKIQLPSWVDVVKTGKFKELAPYDPDWYYVRA 318
MA ++VKDV +F+KAY+AHLK + K++LP WVD+VKT +FKEL PYDPDWYY RA
Sbjct: 1 MADSTARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRA 60
Query: 319 ASVARKLYIRQGMGVGLFRTQYGGRNKRRGSKPEFQSKASGGLVRHIMKQLEECGLMEKA 498
AS+ARK+Y+RQG+GVG F+ YGGR +R GS+P K+SG + R+I++QL++ G+++
Sbjct: 61 ASIARKIYLRQGIGVGGFQKIYGGR-QRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVD 119
Query: 499 PEKGRRLTANGQRDMDQIAGRITVQL 576
P+ GR +T+ G+RD+DQ+AGR+ V +
Sbjct: 120 PKGGRLITSQGRRDLDQVAGRVDVTI 145
>gb|AAN39006.1| putative 40S ribosomal protein S19 [Griffithsia japonica]
Length = 150
Score = 155 bits (391), Expect = 2e-36
Identities = 75/134 (55%), Positives = 97/134 (71%)
Frame = +1
Query: 160 SVKDVPAEDFIKAYAAHLKANDKIQLPSWVDVVKTGKFKELAPYDPDWYYVRAASVARKL 339
+VKDVPA +F+ YA+HLK I++P WVD +KT +ELAPYDPDW Y+R AS+ARKL
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 340 YIRQGMGVGLFRTQYGGRNKRRGSKPEFQSKASGGLVRHIMKQLEECGLMEKAPEKGRRL 519
YIR G+G G FR YG R KRRG KP SK+SGGL+R+ ++QLE+ G+ EK GRR+
Sbjct: 72 YIRGGIGTGEFRKIYGDR-KRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRI 130
Query: 520 TANGQRDMDQIAGR 561
T+ GQ +MD A +
Sbjct: 131 TSKGQSEMDTQASQ 144
