Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000170A_C01 KCC000170A_c01
(532 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB92810.1| P0551A11.2 [Oryza sativa (japonica cultivar-grou... 34 1.0
ref|NP_294689.1| GMC oxidoreductase [Deinococcus radiodurans] gi... 33 1.8
ref|XP_227060.2| similar to ENSANGP00000007226 [Rattus norvegicus] 33 2.3
ref|XP_192674.1| similar to netrin 4; beta-netrin [Mus musculus] 32 3.9
ref|NP_067295.1| netrin 4; beta-netrin [Mus musculus] gi|9652103... 32 3.9
>dbj|BAB92810.1| P0551A11.2 [Oryza sativa (japonica cultivar-group)]
gi|21328104|dbj|BAC00685.1| OJ1116_C07.2 [Oryza sativa
(japonica cultivar-group)]
Length = 285
Score = 34.3 bits (77), Expect = 1.0
Identities = 20/68 (29%), Positives = 32/68 (46%), Gaps = 2/68 (2%)
Frame = -3
Query: 419 HAAFSSQPARARPQGRQMLRRHSYHTVATTAAARDPLRSP--LRTPTVRSGSRKKAWHPT 246
H + PAR P + +H + + AAAR + P + RSG R ++HP
Sbjct: 117 HTRRAPAPARVGPVPPPHRTSYHHHRLDSCAAARRAYKRPCTVNETGARSGGRGVSFHPE 176
Query: 245 DSDALLRC 222
+++A RC
Sbjct: 177 EAEAAWRC 184
>ref|NP_294689.1| GMC oxidoreductase [Deinococcus radiodurans] gi|7471986|pir||C75453
GMC oxidoreductase - Deinococcus radiodurans (strain R1)
gi|6458692|gb|AAF10542.1|AE001949_1 GMC oxidoreductase
[Deinococcus radiodurans]
Length = 529
Score = 33.5 bits (75), Expect = 1.8
Identities = 33/102 (32%), Positives = 41/102 (39%), Gaps = 7/102 (6%)
Frame = -3
Query: 410 FSSQPARARPQGRQMLRRHSYHTVATTAAARDPLRSPLRTPTVRSGSRKKAWHPTDSDAL 231
F+ P +P R +R A+ DPL PL P S SR D D L
Sbjct: 373 FTLLPTLLQPHSRGQIR----------LASADPLARPLIEPNYLSDSR-------DLDVL 415
Query: 230 LRCVTNFREVAKTALASEF-------AAEATRA*ILTHNSRE 126
LR + REVA TA + + A AT LT + RE
Sbjct: 416 LRGIELAREVADTAALTSYRRAEFLPGAGATDRAALTEHVRE 457
>ref|XP_227060.2| similar to ENSANGP00000007226 [Rattus norvegicus]
Length = 5046
Score = 33.1 bits (74), Expect = 2.3
Identities = 17/42 (40%), Positives = 21/42 (49%)
Frame = +3
Query: 12 TCRTCQHFIEELGVAASLHSQVCQQAPSIFNCIISTPGFPGV 137
T R C+ I E + H VCQ P FNC+ T G+ GV
Sbjct: 3995 TGRACERDINECLPSPCKHGAVCQNFPGGFNCVCKT-GYTGV 4035
>ref|XP_192674.1| similar to netrin 4; beta-netrin [Mus musculus]
Length = 628
Score = 32.3 bits (72), Expect = 3.9
Identities = 17/44 (38%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Frame = +3
Query: 315 VPGRCCCRHSMITMAPQHLSPLWAGPCWL---GRKGSMAHQRTC 437
V GRC C+H+ QH +PL+ W GR G+ RTC
Sbjct: 289 VHGRCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTC 332
>ref|NP_067295.1| netrin 4; beta-netrin [Mus musculus]
gi|9652103|gb|AAF91404.1|AF268066_1 netrin 4 [Mus
musculus] gi|11120055|gb|AAG30823.1|AF281278_1 beta
netrin [Mus musculus]
Length = 628
Score = 32.3 bits (72), Expect = 3.9
Identities = 17/44 (38%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Frame = +3
Query: 315 VPGRCCCRHSMITMAPQHLSPLWAGPCWL---GRKGSMAHQRTC 437
V GRC C+H+ QH +PL+ W GR G+ RTC
Sbjct: 289 VHGRCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTC 332
