Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000159A_C01 KCC000159A_c01
(500 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00125384.1| hypothetical protein [Pseudomonas syringae pv... 38 0.080
emb|CAC37156.2| PDZ-domain protein [Leishmania major] 37 0.14
pir||T43481 probable mucin DKFZp434C196.1 - human (fragment) gi|... 34 1.2
ref|NP_689844.1| hypothetical protein FLJ35782 [Homo sapiens] gi... 33 2.6
ref|NP_881489.1| adhesin [Bordetella pertussis] gi|33563918|emb|... 32 3.3
>ref|ZP_00125384.1| hypothetical protein [Pseudomonas syringae pv. syringae B728a]
Length = 255
Score = 37.7 bits (86), Expect = 0.080
Identities = 38/120 (31%), Positives = 52/120 (42%)
Frame = +3
Query: 135 PKRPALLLRLPMPRACCFASLTRTAFRWSQARHAAKIVHSPNTKHTSRKPPD*RVQIALP 314
P RP LL+ LP P + R A S A HAA + N + +R+P RV++ P
Sbjct: 17 PSRPQLLVPLPPP-----VEVQRVAPAASPAEHAAP-AEASNVEPIARQPERPRVEV--P 68
Query: 315 RTMLKGSQQLRAPSAAQHRSPLLNSKCCCWSGNGPRRPPRAREFIRPPPPFEVHLQTAER 494
R L ++ AP AA+ P PP+A + PPP F + L A R
Sbjct: 69 RPSLASTR--TAPPAAEEAEP---------------APPKAP--VVPPPRFALQLLRAGR 109
>emb|CAC37156.2| PDZ-domain protein [Leishmania major]
Length = 471
Score = 37.0 bits (84), Expect = 0.14
Identities = 26/82 (31%), Positives = 37/82 (44%), Gaps = 1/82 (1%)
Frame = +3
Query: 45 SLPPVGDATRERLDTAPDTLDCESARDSKRPKRPALLLR-LPMPRACCFASLTRTAFRWS 221
SLPP A +TAP L RP A++ R P+P+AC S+ A R +
Sbjct: 254 SLPPPPSALVTTNETAPPPLPVLRQPSRARPDADAVVSRPAPLPQACVDQSMRERAVRDT 313
Query: 222 QARHAAKIVHSPNTKHTSRKPP 287
A + ++ S T T+ PP
Sbjct: 314 HAPTSMRMADSSATAATTTAPP 335
>pir||T43481 probable mucin DKFZp434C196.1 - human (fragment)
gi|6599134|emb|CAB63715.1| hypothetical protein [Homo
sapiens]
Length = 580
Score = 33.9 bits (76), Expect = 1.2
Identities = 31/90 (34%), Positives = 40/90 (44%)
Frame = +3
Query: 189 ASLTRTAFRWSQARHAAKIVHSPNTKHTSRKPPD*RVQIALPRTMLKGSQQLRAPSAAQH 368
ASLTRT R S R + SP T+ R+ P + + RT + S R P A+
Sbjct: 174 ASLTRTPSRASLTRWPPRA--SP-TRTPPRESPRMSHRASPTRTPPRASPTRRPPRASPT 230
Query: 369 RSPLLNSKCCCWSGNGPRRPPRAREFIRPP 458
R+P S + R PPRA RPP
Sbjct: 231 RTPPRESLRTSHRASPTRMPPRASPTRRPP 260
>ref|NP_689844.1| hypothetical protein FLJ35782 [Homo sapiens]
gi|21751864|dbj|BAC04056.1| unnamed protein product
[Homo sapiens]
Length = 645
Score = 32.7 bits (73), Expect = 2.6
Identities = 38/135 (28%), Positives = 50/135 (36%), Gaps = 2/135 (1%)
Frame = +1
Query: 49 SLPWETPRGRDWTLHPTPLTAKAPETAKDP--NGQHCYCVSQCHVLAASPH*RGRRSAGR 222
SL E P+ R +LHP P +A DP G C L +S H G
Sbjct: 222 SLRPEPPKTRVSSLHPEPPETRASHLRVDPPETGVSHLCPEPPKTLVSSVH-PEPPDTGA 280
Query: 223 RHDMPRKLYTALTRNTHRESPQTSACRLLCPAQC*KAHSSCERPQPRSTEVHC*TPSAAA 402
H P T ++ + H ESP+T L RP+P T+V P
Sbjct: 281 SHLCPEPPETRVS-HLHPESPETGVSHL--------------RPEPSKTQVSSLCPEPP- 324
Query: 403 GAATVHDVLLGPGNS 447
A V + L P N+
Sbjct: 325 -EAGVSHLCLEPPNT 338
>ref|NP_881489.1| adhesin [Bordetella pertussis] gi|33563918|emb|CAE43179.1| adhesin
[Bordetella pertussis]
Length = 4196
Score = 32.3 bits (72), Expect = 3.3
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +3
Query: 267 HTSRKPPD*RVQIALPRTMLKGSQQLRAPSAAQHRSPLLNSKCCCWSGNGPRRPPRAREF 446
H R+ D V +A+ R S L A A+ H PLL+ CC P PP A
Sbjct: 3302 HAQRRQGD--VDMAVARERASLSDVLAAVEASGHHYPLLHFTCCRGETTPPGAPPDA--- 3356
Query: 447 IRPP 458
+ PP
Sbjct: 3357 VAPP 3360
