Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000152A_C01 KCC000152A_c01
(818 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803] 59 1e-07
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 58 2e-07
ref|ZP_00140133.1| COG1108: ABC-type Mn2+/Zn2+ transport systems... 57 3e-07
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 56 8e-07
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 55 1e-06
>gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803]
Length = 816
Score = 58.5 bits (140), Expect = 1e-07
Identities = 69/198 (34%), Positives = 79/198 (39%), Gaps = 42/198 (21%)
Frame = -3
Query: 804 RLRPCHGKCRQRAVSPHGP---PHLPAPGAPPRPPGRRRR-VHLRPP---LPGH---PPR 655
R R C G R R +P GP P P P A P PP R V R P L G PPR
Sbjct: 348 RRRVCRGPPRGRGGAPRGPARLPRAPPPAARPGPPPPGRALVRARAPAARLRGARRGPPR 407
Query: 654 PAGRCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQ------GP------ 511
A R R A R R L A RR R P+ GPPG A P + GP
Sbjct: 408 GALRRRPRARPRVPRVLRAPRRDRPVAPRPRPVRRGPPGAEARPGRRRGRRGGPPTSGLA 467
Query: 510 ---SASPRPRPSRR-----------HSRRCRMHSLAGAGAAGQGGRWPARG---RAGAGA 382
S +P PR +RR SR + ++A AGA R R R +G+
Sbjct: 468 FTQSGAPDPRAARRPATSPRSRATSSSRALKRRAVATAGAPPSASRSSTRAAAVRRRSGS 527
Query: 381 ARRRCTR-PRP--QPDAP 337
RR R PR P AP
Sbjct: 528 RTRRWARTPRTTGSPTAP 545
Score = 55.8 bits (133), Expect = 8e-07
Identities = 61/182 (33%), Positives = 67/182 (36%), Gaps = 25/182 (13%)
Frame = -3
Query: 804 RLRPCHGKCRQ-----RAVSPHGPPHLPA----PGAPPRPPGRRRRVHLRPP------LP 670
RL P CR+ R P +P P P PP R RV P P
Sbjct: 154 RLGPRAPVCRRPRRAGRGAPGRAPGRVPVRRRVPARPAPPPAARYRVRALPERGAPRGAP 213
Query: 669 GHPPRPAGRCRGSAAGRRWRSLT---ARRRPRQRRPQTSWPAA-------GPPGTAAAPT 520
G P R RG A R R L AR PR R + AA GPP AAAP
Sbjct: 214 GRHGPPGLRPRGRGACARRRPLPVPRARGPPRGVRARLGRDAARRGVAARGPPARAAAPG 273
Query: 519 QGPSASPRPRPSRRHSRRCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQPDA 340
+ RP P R R G + G R P RG A G R RPRP+ A
Sbjct: 274 RAGDRRGRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRP-RRPRPRRRA 332
Query: 339 PL 334
PL
Sbjct: 333 PL 334
Score = 53.1 bits (126), Expect = 5e-06
Identities = 62/202 (30%), Positives = 69/202 (33%), Gaps = 45/202 (22%)
Frame = -3
Query: 810 PPRLRPCHGKCRQRAVSPHGPPHLP-APGAPPRPPGRRRRVHLRPPLPGHPPRPAGRCRG 634
P R R C + R A P P AP P PPG RR P G AGR G
Sbjct: 3 PARARLCDVRRRPGAPRPGRPRGAQRAPRPAPDPPGPGRRPPRAPGALGGMLPAAGRLAG 62
Query: 633 SAAGRRWRSLTAR--------------------------------RRPRQRRPQTSWPAA 550
A GR R+ + RPRQR P + A
Sbjct: 63 PARGRGLRAASGALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAP 122
Query: 549 G---PPGTAAAPTQGPSASPRPRPSRR--------HSRRCRMHSLAGAGAAGQG-GRWPA 406
G PP AP +G RPR RR + CR AG GA G+ GR P
Sbjct: 123 GRRRPPAGRRAPVRGDRRRGRPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPGRAPGRVPV 182
Query: 405 RGRAGAGAARRRCTRPRPQPDA 340
R R A RP P P A
Sbjct: 183 RRRVPA--------RPAPPPAA 196
Score = 47.8 bits (112), Expect = 2e-04
Identities = 64/161 (39%), Positives = 67/161 (40%), Gaps = 19/161 (11%)
Frame = +2
Query: 329 RWSGASGCGRGRVQRRLAAPAPALPLAGQRPP-CPAA-----PAPARLCIRQRREWRRLG 490
R GA GR R +R PAP P G+RPP P A PA RL R G
Sbjct: 13 RRPGAPRPGRPRGAQRAPRPAPDPPGPGRRPPRAPGALGGMLPAAGRLAGPAR------G 66
Query: 491 RGRGLADGPCVGAAAV---PGGPAAGQEV*GR-R*RGRRRAVRLRQRLP-----AALPRQ 643
RG A G G V G P A GR GR R R RQR P A R+
Sbjct: 67 RGLRAASGALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAPGRRR 126
Query: 644 RPAGRGG*PGNGGRRCTR----RRRPGGRGGAPGAGRCGGP 754
PAGR P G RR R RR PGGR G P A C P
Sbjct: 127 PPAGRRA-PVRGDRRRGRPRAPRRGPGGRLG-PRAPVCRRP 165
Score = 45.4 bits (106), Expect = 0.001
Identities = 53/168 (31%), Positives = 62/168 (36%), Gaps = 10/168 (5%)
Frame = -3
Query: 810 PPRLRPCHGKCRQRAVSPHGPPHLPAPGAPPR-------PPGRRR--RVHLRPPLPGHPP 658
PP G+ R P P + AP P PPGRR R R P P
Sbjct: 265 PPARAAAPGRAGDRRGRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPR 324
Query: 657 RPAGRCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPR-PRPSR 481
RP R R R + ARRR R+ GPP +GP+ PR P P+
Sbjct: 325 RPRPRRRAPLRSARRGAPDARRRRRR-------VCRGPPRGRGGAPRGPARLPRAPPPAA 377
Query: 480 RHSRRCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQPDAP 337
R +L A A R RG GA RR RPR +P P
Sbjct: 378 RPGPPPPGRALVRARAPAARLRGARRG-PPRGALRR---RPRARPRVP 421
Score = 43.1 bits (100), Expect = 0.005
Identities = 48/171 (28%), Positives = 63/171 (36%), Gaps = 18/171 (10%)
Frame = -3
Query: 807 PRLRP-----CHGKCRQRAVSPHGPPHLPAPGAPPRPPGRRRRVHLRPPLPGHPPRPAG- 646
PR RP R R V+P P P PGRRR PP G +G
Sbjct: 414 PRARPRVPRVLRAPRRDRPVAPRPRPVRRGPPGAEARPGRRRGRRGGPPTSGLAFTQSGA 473
Query: 645 ----RCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRPRPSRR 478
R A R R+ ++ R ++R T A PP + + T+ +A+ R R R
Sbjct: 474 PDPRAARRPATSPRSRATSSSRALKRRAVAT---AGAPPSASRSSTR--AAAVRRRSGSR 528
Query: 477 HSRRCRMHSLAGAGAAGQGGRWPAR--------GRAGAGAARRRCTRPRPQ 349
R R G+ A + GR PA G AARR P+
Sbjct: 529 TRRWARTPRTTGSPTAPRSGRQPANVDLRGGPPGEERGPAARRELVGDHPE 579
Score = 38.1 bits (87), Expect = 0.17
Identities = 62/178 (34%), Positives = 71/178 (39%), Gaps = 19/178 (10%)
Frame = +2
Query: 278 RATEALRCRVHHDEQPTRWSGASGCGRGRVQRRLAAPAPALPLAGQRPPCPAAPAPARLC 457
R LR R H D + + G G RG RR P P P +R P +A A
Sbjct: 287 RVRAPLRPR-HADGRLSPPPGRRGPPRGDA-RRGPPPRPRRPRPRRRAPLRSARRGAPDA 344
Query: 458 IRQRRE-WRRLGRGRGLAD-GPC-----VGAAAVPGGPAAGQEV*-----GRR*RGRRR- 598
R+RR R RGRG A GP AA PG P G+ + R RG RR
Sbjct: 345 RRRRRRVCRGPPRGRGGAPRGPARLPRAPPPAARPGPPPPGRALVRARAPAARLRGARRG 404
Query: 599 ----AVRLRQRLPAALPRQRPAGRGG*PGNGGRRCTRRRRPGGRGGAPG--AGRCGGP 754
A+R R R +PR A R P R RR PG PG GR GGP
Sbjct: 405 PPRGALRRRPRARPRVPRVLRAPRRDRPVAPRPRPVRRGPPGAE-ARPGRRRGRRGGP 461
Score = 34.3 bits (77), Expect = 2.5
Identities = 47/133 (35%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Frame = +2
Query: 341 ASGCGRGRVQRRLAAPAPALPLAGQRPPCPAAPAPARLCIRQRREWRRLGRGRGLADGPC 520
A G RG V+ RL A +A + PP AA AP R R+ R R L
Sbjct: 240 ARGPPRG-VRARLGRDAARRGVAARGPPARAA-APGRAGDRRGRPGPRPRVRAPLRPRHA 297
Query: 521 VGAAAVPGG---PAAGQEV*GRR*RGRRRAVRLRQRLPAALPRQRPAGRGG*PGNGGRRC 691
G + P G P G G R RR R R+R P R A RG RR
Sbjct: 298 DGRLSPPPGRRGPPRGDARRGPPPRPRRP--RPRRRAPL-----RSARRGAPDARRRRRR 350
Query: 692 TRRRRPGGRGGAP 730
R P GRGGAP
Sbjct: 351 VCRGPPRGRGGAP 363
Score = 33.9 bits (76), Expect = 3.3
Identities = 76/235 (32%), Positives = 80/235 (33%), Gaps = 48/235 (20%)
Frame = +2
Query: 218 RLAG---SHGCRETSGIPSCWTDRATEALRCRVHHDEQPTRWSGASGCGR---GRVQRR- 376
RLAG G R SG LR R +P R G GR GR ++R
Sbjct: 59 RLAGPARGRGLRAASGA----LRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRA 114
Query: 377 ----LAAPAPALPLAGQRPPC--------PAAP---APARLCIRQR--REWRRLGRGR-G 502
L AP P AG+R P P AP RL R R RR GRG G
Sbjct: 115 PGRALGAPGRRRPPAGRRAPVRGDRRRGRPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPG 174
Query: 503 LADGPCVGAAAVPG----GPAAGQEV*GRR*RGRRRAVRLRQRLPAALPRQR-------- 646
A G VP PAA V RG R R P PR R
Sbjct: 175 RAPGRVPVRRRVPARPAPPPAARYRVRALPERGAPRGAPGRHGPPGLRPRGRGACARRRP 234
Query: 647 -PAGRGG*PGNG-----GRRCTRR----RRPGGRGGAPG-AGRCGGPCGDTARCR 778
P R P G GR RR R P R APG AG G G R R
Sbjct: 235 LPVPRARGPPRGVRARLGRDAARRGVAARGPPARAAAPGRAGDRRGRPGPRPRVR 289
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive matrix
protein 1 [Rattus norvegicus]
Length = 958
Score = 58.2 bits (139), Expect = 2e-07
Identities = 49/155 (31%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Frame = -3
Query: 750 PPHLPAPGAPPRPPGRRRRVHLRPPLPGHPPRPAGRC--------RGSAAGRRWRSLTAR 595
PP P A P PP +RR H PP PP R +GS+ GR R +
Sbjct: 671 PPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSP 730
Query: 594 R-------RPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRPRPSRRHSRRCRMHSL-AGA 439
+ PR R PQTS P G +A+P S SP RP RR SR + A
Sbjct: 731 QPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAA 790
Query: 438 GAAGQGGRWPARGRAGAGAARRRCTRPRPQPDAPL 334
+ Q R + R+ +G+ +P P P +P+
Sbjct: 791 SPSPQSVRRVSSSRSVSGSPEPTAKKP-PAPPSPV 824
Score = 46.6 bits (109), Expect = 5e-04
Identities = 55/171 (32%), Positives = 68/171 (39%), Gaps = 14/171 (8%)
Frame = -3
Query: 807 PRLRPCHGKCRQRAVSPHGPP----HLPAPGAPPRPPG-RRRRVHLRPPLPGHPPRPAGR 643
PR R R+R SP PP P+P PP PP RRR PP P P R
Sbjct: 582 PRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPR 641
Query: 642 CRGSAAGRRWRSLTARR----RPRQRRPQTSWPAAGPPGTAAAPTQGP----SASPRPRP 487
R S + RR+ RR P +RR + P PP A+P+ P S SP P+
Sbjct: 642 -RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP---PPKRRASPSPPPKRRVSHSPPPKQ 697
Query: 486 SRRHSRRCRMHSLAGAGAAGQG-GRWPARGRAGAGAARRRCTRPRPQPDAP 337
+ R SL+ G GR R+ R P P+P AP
Sbjct: 698 RSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRH---SPSPRPRAP 745
Score = 42.0 bits (97), Expect = 0.012
Identities = 50/169 (29%), Positives = 62/169 (36%), Gaps = 15/169 (8%)
Frame = -3
Query: 807 PRLRPCHGKCRQRAVSPHGPPHLPAPGAPPRPPGRRRR---------------VHLRPPL 673
PR RP R+R PP P R PGRRRR R P
Sbjct: 374 PRRRPSP---RRRTPPRRMPP--PPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSP- 427
Query: 672 PGHPPRPAGRCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRP 493
P PP+ R S+ R+ R L+ P +RR + S PA PP T +PT P S R
Sbjct: 428 PKKPPK-----RTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPT--PQQSNRA 480
Query: 492 RPSRRHSRRCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQP 346
R SR + GR + G +R P P+P
Sbjct: 481 RKSR---------------VSVSPGRTSGKVTKHKGTEKRESPSPAPKP 514
Score = 38.1 bits (87), Expect = 0.17
Identities = 36/129 (27%), Positives = 52/129 (39%), Gaps = 20/129 (15%)
Frame = -2
Query: 808 ATAAALSREMSAAGSVATRPTAPASAR-------SAATAAGAASPRASAAAIARSSTT-- 656
+T A S + + S + RP AP ++ ++A+ G SP S I R S T
Sbjct: 723 STREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPE 782
Query: 655 ------ACRPLPG*C-----SREALAKPDSTSAASSAPPSNFLACSWSSRHRSSADARPV 509
A P P SR P+ T+ APPS + S S+ +A A+
Sbjct: 783 PKKIKKAASPSPQSVRRVSSSRSVSGSPEPTAKKPPAPPSPVQSQSPSTNWSPAAPAKKA 842
Query: 508 GEPAPAPEP 482
P P+P P
Sbjct: 843 KSPTPSPSP 851
Score = 33.5 bits (75), Expect = 4.3
Identities = 29/88 (32%), Positives = 35/88 (38%), Gaps = 2/88 (2%)
Frame = -3
Query: 708 GRRRRVHLRPPLPGHPPRPAGRCRGSAAGRRWRSLTA--RRRPRQRRPQTSWPAAGPPGT 535
GRRRR P P P R + ++ RR RS + RR R P P PP
Sbjct: 567 GRRRR---HSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRR 623
Query: 534 AAAPTQGPSASPRPRPSRRHSRRCRMHS 451
+PT P P RR S R +S
Sbjct: 624 RRSPTPPPRRRTPSPPPRRRSPSPRRYS 651
Score = 32.7 bits (73), Expect = 7.3
Identities = 30/91 (32%), Positives = 40/91 (42%), Gaps = 7/91 (7%)
Frame = +1
Query: 373 ASGRASPCPSPRWPAPPLP----SSTSTSKTMHPAAPRVAAARARARARRR---ALRRRC 531
A R SP P+P P PP P S T + P+ P R R+ + RR ++RR
Sbjct: 603 ARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPP----PRRRSPSPRRYSPPIQRR- 657
Query: 532 CGAWRTSCRPRSLRAALTRPPTCCQASPAPP 624
+ P R A PP +ASP+PP
Sbjct: 658 ----YSPSPPPKRRTASPPPPPKRRASPSPP 684
>ref|ZP_00140133.1| COG1108: ABC-type Mn2+/Zn2+ transport systems, permease components
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 478
Score = 57.4 bits (137), Expect = 3e-07
Identities = 56/152 (36%), Positives = 62/152 (39%), Gaps = 17/152 (11%)
Frame = -3
Query: 729 GAPPRPPGRRRRVHLRP-PLPGHPPRPA-----GRCRGSAAGRR-WRSLTARRRPRQRRP 571
G PRP RRR H R P P PRP G RG AGR ++ +A RP +RR
Sbjct: 16 GVRPRPAAHRRRFHGRHVPAPSGLPRPVAQPAPGDRRGPGAGRHAGQARSAHGRPLRRRA 75
Query: 570 QTSWPAAGP-PGTAAAPTQGPSASPRPRPSRRHSRRCRMHSLA------GAGAAGQGGRW 412
AAGP PGTAAA PR R R LA A GGR
Sbjct: 76 PAR--AAGPGPGTAAATAGAGRTDVGPRRGRHPGLRAAAAGLAPGRRHRALDRARPGGRR 133
Query: 411 PAR---GRAGAGAARRRCTRPRPQPDAPLHRV 325
P R R+ A RR +P P P H V
Sbjct: 134 PPRRPGQRSQPPPAVRRSGGQQPDPGTPAHAV 165
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 55.8 bits (133), Expect = 8e-07
Identities = 61/195 (31%), Positives = 68/195 (34%), Gaps = 8/195 (4%)
Frame = -3
Query: 780 CRQRAVSPHGPPHLPAPGAPPRPPGRRRRVHLRPPLPGHP-PRPAGRCRGSAAGRRWRSL 604
CR V P GP + G P G R H RPP P PRPA S R
Sbjct: 372 CRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARAPPGPRPAPTRAASTPAR----T 427
Query: 603 TARRRPRQRRPQTSWPA-AGPPGTAAAPTQGPSASPRPRPSRRHSRRCRMHSLAGAGAAG 427
+R RP PA A PP AAAPT P P P +RR AG G
Sbjct: 428 GSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPVPRARR---GPAAGNGRPP 484
Query: 426 Q------GGRWPARGRAGAGAARRRCTRPRPQPDAPLHRVGCSSW*TRHRSASVALSVQH 265
G R PA RRR RP P P H R+ SA +
Sbjct: 485 STRDRTAGTRAPASPPGAPPPVRRR--RPPPPRAPPPHHPS-----ARNPSARATPRPRP 537
Query: 264 EGMPLVSRQPCEPAR 220
P + +P P R
Sbjct: 538 PPRPSAAARPEPPPR 552
Score = 52.4 bits (124), Expect = 9e-06
Identities = 48/128 (37%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = -3
Query: 717 RPPGRRRRVHLRPPLPGHPPRPAGRCRGSAAGR-RWRSLTARRRPRQRRPQTSWPAAGPP 541
R PG+R RV GH + AG+ G A R R R+ +R R R P T+ P GP
Sbjct: 291 RLPGQRERV-------GHVQQRAGQQEGPPAERHRARADDPAQRRRGRPPATTGPRTGPA 343
Query: 540 GTAAAPTQGPSASPRPRPSRRHSRRCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTR 361
G A SA R R R RCR GAG +G PA G AGAG
Sbjct: 344 GPAGPAGPRRSAPGRARRIRARGSRCR--CCRGAGVEPEG---PANG-AGAGRPTATSGY 397
Query: 360 PRPQPDAP 337
RPQ P
Sbjct: 398 ARPQHARP 405
Score = 51.6 bits (122), Expect = 2e-05
Identities = 54/163 (33%), Positives = 62/163 (37%), Gaps = 17/163 (10%)
Frame = -3
Query: 810 PPRLRPCHGKCRQRAVSPHGPPHL--PAPGAPPRPPGRRRRVHLRPPLPGHPPRPAGRCR 637
P R + R SP P PAP APPR RPP P PP P R R
Sbjct: 417 PTRAASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPAR-RPPPPPTPPVPRAR-R 474
Query: 636 GSAAGR----RWRSLTARRR---------PRQRRPQTSWPAAGPPGTAAAPTQGPSASPR 496
G AAG R TA R P RR + P A PP +A A+PR
Sbjct: 475 GPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPR 534
Query: 495 PRPSRRHSRRCRMH--SLAGAGAAGQGGRWPARGRAGAGAARR 373
PRP R S R A G +G P+ R+ + RR
Sbjct: 535 PRPPPRPSAAARPEPPPRAAPGPSGTAPGPPSGPRSPSPLHRR 577
Score = 40.8 bits (94), Expect = 0.027
Identities = 39/114 (34%), Positives = 40/114 (34%), Gaps = 6/114 (5%)
Frame = -3
Query: 816 GIPPRLRPCHGKCRQRAVSPHGPPHL-----PAPGA-PPRPPGRRRRVHLRPPLPGHPPR 655
G PP R R A P PP + P P A PP P R P P PPR
Sbjct: 481 GRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPRPRPPPR 540
Query: 654 PAGRCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRP 493
P S AR P R A GP GTA P GP SP P
Sbjct: 541 P--------------SAAARPEPPPR------AAPGPSGTAPGPPSGP-RSPSP 573
Score = 37.0 bits (84), Expect = 0.39
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = -2
Query: 796 ALSREMSAAGSVATRPTAPASARSAATAAGAASPRASAAAIARSSTTACRPLPG*CSREA 617
A +R S +RP +P + +A + A AA PRA+AA T A RP P
Sbjct: 416 APTRAASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAA-----PTPARRPPPPPTPPVP 470
Query: 616 LAKPDSTSAASSAPPSNFLACSWSSRHRSS---ADARPVGEPAPA--PEPPPLAALP 461
A+ +A + PP S+R R++ A A P G P P PPP A P
Sbjct: 471 RAR-RGPAAGNGRPP--------STRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPP 518
Score = 36.2 bits (82), Expect = 0.66
Identities = 29/85 (34%), Positives = 34/85 (39%), Gaps = 8/85 (9%)
Frame = -3
Query: 816 GIPPRLRPCHGKCRQRAVSPHGPP-HLPAPGAP-------PRPPGRRRRVHLRPPLPGHP 661
G PP +R R+R P PP H P+ P PRPP R P P
Sbjct: 501 GAPPPVR------RRRPPPPRAPPPHHPSARNPSARATPRPRPPPRPSAAARPEPPPRAA 554
Query: 660 PRPAGRCRGSAAGRRWRSLTARRRP 586
P P+G G +G R S RR P
Sbjct: 555 PGPSGTAPGPPSGPRSPSPLHRRTP 579
Score = 34.7 bits (78), Expect = 1.9
Identities = 47/164 (28%), Positives = 53/164 (31%), Gaps = 16/164 (9%)
Frame = +1
Query: 361 PCATASGRASPCPSPRWPAPPLPSSTSTSKT--MHPAAPRVAAARARARARRRALRRRCC 534
P RA R PP + T PA PR +A R R R R RCC
Sbjct: 313 PAERHRARADDPAQRRRGRPPATTGPRTGPAGPAGPAGPRRSAPGRARRIRARGSRCRCC 372
Query: 535 --------------GAWRTSCRPRSLRAALTRPPTCCQASPAPPCCTTPAAACRPWWMTW 672
GA R + R RPP +A P P T AA+
Sbjct: 373 RGAGVEPEGPANGAGAGRPTATSGYARPQHARPP--ARAPPGPRPAPTRAASTPA----- 425
Query: 673 QWRPQMHAATPPRRPWRRSGRWQVRWAVWRHCPLPTFPVTRPQP 804
R A+PP RP S A R PT P RP P
Sbjct: 426 --RTGSRPASPPTRPTAPS---PAPAAPPRAAAAPT-PARRPPP 463
Score = 33.5 bits (75), Expect = 4.3
Identities = 33/122 (27%), Positives = 41/122 (33%), Gaps = 1/122 (0%)
Frame = +1
Query: 355 PRPCATASGRASPCPSPRWPAPPLPSSTSTSKTMHPAAPRVAAARARARARRRALRRRCC 534
P P A RA+ P+P PP P+ P PR A R + R R
Sbjct: 441 PSPAPAAPPRAAAAPTPARRPPPPPT---------PPVPRARRGPAAGNGRPPSTRDRTA 491
Query: 535 GAWRTSCRPRS-LRAALTRPPTCCQASPAPPCCTTPAAACRPWWMTWQWRPQMHAATPPR 711
G + P + RPP P P P+A P RP+ PP
Sbjct: 492 GTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATP-------RPR-----PPP 539
Query: 712 RP 717
RP
Sbjct: 540 RP 541
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 55.1 bits (131), Expect = 1e-06
Identities = 48/155 (30%), Positives = 64/155 (40%), Gaps = 16/155 (10%)
Frame = -3
Query: 750 PPHLPAPGAPPRPPGRRRRVHLRPPLPGHPPRPAGRC--------RGSAAGRRWRSLTAR 595
PP P A P PP +RR H PP P R +GS+ GR R +
Sbjct: 636 PPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSSKHRKGSSPGRSTREARSP 695
Query: 594 R-------RPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRPRPSRRHSRRCRMHSL-AGA 439
+ PR R PQTS P G +A+P S SP RP RR SR + A
Sbjct: 696 QPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAA 755
Query: 438 GAAGQGGRWPARGRAGAGAARRRCTRPRPQPDAPL 334
+ Q R + R+ +G+ +P P P +P+
Sbjct: 756 SPSPQSVRRVSSSRSVSGSPEPAAKKP-PAPPSPV 789
Score = 47.0 bits (110), Expect = 4e-04
Identities = 49/155 (31%), Positives = 59/155 (37%), Gaps = 8/155 (5%)
Frame = -3
Query: 783 KCRQRAVSPHGPPHL------PAPGAPPRPPGRRRRVHLRPPLPGHPPRPAGRCRGSAAG 622
K +R SP PP PAP PP PP RRR PP P P R R S +
Sbjct: 554 KSSRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPR-RRSPSP 612
Query: 621 RRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPS--ASPRPRPSRRHSRRCRMHSL 448
RR+ P QRR S P P A+P P ASP P P RR S
Sbjct: 613 RRYSP------PIQRRYSPSPP---PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQR 663
Query: 447 AGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQPD 343
+ + ++ R G+ R PQP+
Sbjct: 664 SPTVTKRRSPSLSSKHRKGSSPGRSTREARSPQPN 698
Score = 42.0 bits (97), Expect = 0.012
Identities = 50/169 (29%), Positives = 62/169 (36%), Gaps = 15/169 (8%)
Frame = -3
Query: 807 PRLRPCHGKCRQRAVSPHGPPHLPAPGAPPRPPGRRRR---------------VHLRPPL 673
PR RP R+R PP P R PGRRRR R P
Sbjct: 315 PRRRPSP---RRRTPPRRMPP--PPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSP- 368
Query: 672 PGHPPRPAGRCRGSAAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPRP 493
P PP+ R S+ R+ R L+ P +RR + S PA PP T +PT P S R
Sbjct: 369 PKKPPK-----RTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPT--PQQSNRT 421
Query: 492 RPSRRHSRRCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQP 346
R SR + GR + G +R P P+P
Sbjct: 422 RKSR---------------VSVSPGRTSGKVTKHKGTEKRESPSPAPKP 455
Score = 41.2 bits (95), Expect = 0.020
Identities = 50/202 (24%), Positives = 71/202 (34%), Gaps = 18/202 (8%)
Frame = -3
Query: 774 QRAVSPHGPPHLPAPGAPPR----------PPGRRRRVHLRPPL--PGHPPRPAGRCRGS 631
+R SP PP P PPR PP +RR PP PP P R R S
Sbjct: 587 RRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKR-RAS 645
Query: 630 AAGRRWRSLTARRRPRQRRPQTSWPAAGPPGTAAAPTQGPSASPR----PRPSRRH--SR 469
+ R ++ P+QR P + + + P S R P+P++RH S
Sbjct: 646 PSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSP 705
Query: 468 RCRMHSLAGAGAAGQGGRWPARGRAGAGAARRRCTRPRPQPDAPLHRVGCSSW*TRHRSA 289
R R + +G +GR + R R P+ + S R
Sbjct: 706 RPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRV 765
Query: 288 SVALSVQHEGMPLVSRQPCEPA 223
S + SV P + P P+
Sbjct: 766 SSSRSVSGSPEPAAKKPPAPPS 787
Score = 35.8 bits (81), Expect = 0.86
Identities = 34/104 (32%), Positives = 47/104 (44%), Gaps = 18/104 (17%)
Frame = -3
Query: 708 GRRRRVHLRPPLPGHPPRPAGRCRGSAA----GRRWRS---LTARRR-----PRQRRPQT 565
GRRRR+ P P P R + ++ G+RW+S ++RRR P RR ++
Sbjct: 516 GRRRRLS---PSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRS 572
Query: 564 SWPAAGPPGTAAAPTQGPSASPRPR------PSRRHSRRCRMHS 451
PA PP P + S +P PR P RR S R +S
Sbjct: 573 PSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYS 616
Score = 33.5 bits (75), Expect = 4.3
Identities = 45/181 (24%), Positives = 63/181 (33%), Gaps = 1/181 (0%)
Frame = -3
Query: 747 PHLPAPGAPPRPPGRRRRVHLRPPLPGHPPRPAGRCRGSAAGRRWRSLTARRRPRQRRPQ 568
P LP P + + L P P + + + + + RPR R
Sbjct: 221 PELPEPSVRMKDSSVQEATSTSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRS 280
Query: 567 TSWPAAGPPGTAAAPTQGPSASPRPRPSRRHSRRCRMHSLAGAGAAGQGGRWPARGRAGA 388
S + ++ PS + RP RRH R R +S R P+ R
Sbjct: 281 KS--------RSRTRSRSPSHT---RPRRRHRSRSRSYSPR---------RRPSPRRR-- 318
Query: 387 GAARRRCTRPRPQPDAPLHRVGCSSW*TRHR-SASVALSVQHEGMPLVSRQPCEPARRGG 211
+ RR T PR P P HR S R R SAS++ S P +P +R
Sbjct: 319 -PSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTS 377
Query: 210 S 208
S
Sbjct: 378 S 378
Score = 33.1 bits (74), Expect = 5.6
Identities = 29/88 (32%), Positives = 36/88 (39%), Gaps = 4/88 (4%)
Frame = +1
Query: 373 ASGRASPCPSPRWPAPPLPSSTSTSKTMHP--AAPRVAAARARARARRRA--LRRRCCGA 540
A R SP P+P P PP P S T P P R RR + ++RR
Sbjct: 567 ARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR---- 622
Query: 541 WRTSCRPRSLRAALTRPPTCCQASPAPP 624
+ P R A PP +ASP+PP
Sbjct: 623 -YSPSPPPKRRTASPPPPPKRRASPSPP 649
