KCC000098A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000098A_C01 KCC000098A_c01
AAACCACTGCACCGAGGGACTTGTCTACATGCTCAGCGGTGCCTGCACGCGCACCACCTT
GACGCTCTCACGAGCGCGCGCCTCTCGCTGCGCCTTTCCGACACCGAACAAGGTTCACCT
CAACCTCGTGTTCGACAAGAAGAGCTGCAATACCATGGGCAACCGCGAGTCCAAGCTCAG
GGCGCACGGCCAGAAGCGTGCAACACCCACGACCGCAGGCGTGGGCGAGTGGGAGAGCCC
CATCACCAGCGCCTTCATCACAGAGAAGGCTGTGCGGCTGGGTGCGGTGGCGGTGCGGCC
GCATGACGGGGCGGTGACGTGGCTGGAGGGGCGGCCGGAGGAGGGCGGGCGGCAGGTGCT
GGTGATCAGGACCGGGGACGGCGAAGAGCACGACGTGACTCCGGGTGTTGACACGGGTTT
CAACGTACGCACCACCGTGCACGAGTACGGCGGCGGCGAGTACACACTGGCCGGCAGCAC
CGTGTACTTCACAAACTTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000098A_C01 KCC000098A_c01
         (499 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00074418.1| COG1506: Dipeptidyl aminopeptidases/acylamino...    94  9e-19
ref|ZP_00019686.1| hypothetical protein [Chloroflexus aurantiacus]     86  3e-16
ref|NP_442437.1| hypothetical protein [Synechocystis sp. PCC 680...    86  3e-16
ref|NP_820512.1| prolyl oligopeptidase family  protein [Coxiella...    84  1e-15
ref|NP_924416.1| probable peptidase [Gloeobacter violaceus] gi|3...    82  5e-15

>ref|ZP_00074418.1| COG1506: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
           [Trichodesmium erythraeum IMS101]
          Length = 644

 Score = 94.0 bits (232), Expect = 9e-19
 Identities = 46/95 (48%), Positives = 63/95 (65%)
 Frame = +2

Query: 215 AGVGEWESPITSAFITEKAVRLGAVAVRPHDGAVTWLEGRPEEGGRQVLVIRTGDGEEHD 394
           A +G W SPIT+  I   A+ L ++ +  ++  V W+EGRP EGGR V+V  T DG+  D
Sbjct: 5   APLGSWNSPITTDLILSGAIGLSSITIDGNN--VYWIEGRPSEGGRNVIVRYTPDGKTTD 62

Query: 395 VTPGVDTGFNVRTTVHEYGGGEYTLAGSTVYFTNF 499
           +TP   + FNVRT VHEYGGG + +A  T+YF+NF
Sbjct: 63  ITP---SPFNVRTRVHEYGGGSFLVADDTIYFSNF 94

>ref|ZP_00019686.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 758

 Score = 85.9 bits (211), Expect = 3e-16
 Identities = 54/128 (42%), Positives = 68/128 (52%), Gaps = 1/128 (0%)
 Frame = +2

Query: 119 LNLVFDKKSCNTMGNRESKLRAHGQKRATPTTAGVGEWESPITSAFITEKAVRLGAVAVR 298
           L + +DK+     GN  S+ R           A  G W SPI++  +  + V L   A+ 
Sbjct: 112 LTVCYDKE-----GNMHSRTRF-----IMAQIAPYGSWRSPISAEMLVARQVSLNWPAI- 160

Query: 299 PHDGA-VTWLEGRPEEGGRQVLVIRTGDGEEHDVTPGVDTGFNVRTTVHEYGGGEYTLAG 475
             DGA + W+EGRP+EGGR VLV RT DG   DVTP      NVRT VHEYGG  YT+  
Sbjct: 161 --DGADIYWIEGRPQEGGRNVLVRRTADGVVSDVTP---PDMNVRTLVHEYGGASYTVDQ 215

Query: 476 STVYFTNF 499
             V+F  F
Sbjct: 216 GEVFFVEF 223

>ref|NP_442437.1| hypothetical protein [Synechocystis sp. PCC 6803]
           gi|7470288|pir||S75772 hypothetical protein slr0825 -
           Synechocystis sp. (strain PCC 6803)
           gi|1001263|dbj|BAA10507.1| ORF_ID:slr0825~hypothetical
           protein [Synechocystis sp. PCC 6803]
          Length = 637

 Score = 85.9 bits (211), Expect = 3e-16
 Identities = 49/99 (49%), Positives = 56/99 (56%)
 Frame = +2

Query: 203 TPTTAGVGEWESPITSAFITEKAVRLGAVAVRPHDGAVTWLEGRPEEGGRQVLVIRTGDG 382
           T   A  G W SPIT+  +   ++ LGAV     D  V WLE RP E GR VLV R  DG
Sbjct: 6   TKQIAPYGSWRSPITADALLAGSIGLGAVQNSGED--VFWLEARPAEKGRNVLVHRQPDG 63

Query: 383 EEHDVTPGVDTGFNVRTTVHEYGGGEYTLAGSTVYFTNF 499
              DVTP     FNVRT VHEYGGG + +    VYF+NF
Sbjct: 64  TVRDVTPAP---FNVRTRVHEYGGGAFLVTADGVYFSNF 99

>ref|NP_820512.1| prolyl oligopeptidase family  protein [Coxiella burnetii RSA 493]
           gi|29542088|gb|AAO91026.1| prolyl oligopeptidase family 
           protein [Coxiella burnetii RSA 493]
          Length = 636

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 44/95 (46%), Positives = 57/95 (59%)
 Frame = +2

Query: 212 TAGVGEWESPITSAFITEKAVRLGAVAVRPHDGAVTWLEGRPEEGGRQVLVIRTGDGEEH 391
           T+  G W SPI++   T  A     + V  HD  + WLE RPEE GRQV++  +  G+ H
Sbjct: 5   TSSYGTWRSPISAE--TAAASSRVLMDVECHDNDIYWLERRPEESGRQVVLRLSSGGDIH 62

Query: 392 DVTPGVDTGFNVRTTVHEYGGGEYTLAGSTVYFTN 496
            VTPG   G NVRT VHEYGGG+Y +   T++F N
Sbjct: 63  AVTPG---GVNVRTRVHEYGGGDYRVHRKTIFFAN 94

>ref|NP_924416.1| probable peptidase [Gloeobacter violaceus]
           gi|35212035|dbj|BAC89411.1| gll1470 [Gloeobacter
           violaceus]
          Length = 638

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 45/95 (47%), Positives = 53/95 (55%)
 Frame = +2

Query: 215 AGVGEWESPITSAFITEKAVRLGAVAVRPHDGAVTWLEGRPEEGGRQVLVIRTGDGEEHD 394
           A  G W+SPIT+  I    + LG V     D  V WLE RP EGGR VLV     G   D
Sbjct: 7   APYGSWKSPITADLIVSGTIGLGMVRADGSD--VYWLESRPTEGGRTVLVRMGARGAIED 64

Query: 395 VTPGVDTGFNVRTTVHEYGGGEYTLAGSTVYFTNF 499
           ++P   +G NVR+ VHEYGGG Y +    VYF NF
Sbjct: 65  ISP---SGSNVRSRVHEYGGGAYAVKDGVVYFVNF 96



EST assemble image


clone accession position
1 HCL046e02_r AV642152 1 334
2 CL63a11_r AV396536 1 324
3 HCL009b11_r AV640036 1 263
4 MXL053h08_r BP096167 1 367
5 HCL025e12_r AV640971 1 387
6 LCL097h10_r AV631668 1 207
7 CL54d11_r AV396164 1 339
8 CL04g04_r AV393394 1 175
9 CL54d07_r AV396148 7 329
10 HCL015b04_r AV640375 13 112
11 LCL012b07_r AV626603 14 500
12 HCL027d12_r AV641082 20 281
13 CL46c10_r AV395665 20 413




Chlamydomonas reinhardtii
Kazusa DNA Research Institute