KCC000094A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000094A_C01 KCC000094A_c01
actaaagctaacaGTCACGTTCATACGTCCTTCTGGCTTGCCGCGAGCGCGTTTTGCCCT
CTTGCACCACAAACCCTTCTCCACTGCTCTTCCCGTCTGTGATGAGCTTGCGTGGCCTGC
CGACAGTCCAGAGCAGTCAGCGCGCAACAAGGCGGTGTGCTGCTCAGGTGGCGTCCTCCG
TGCGGCGTGCTCTGCCGCGCCTGCTGTCGCCGGCGTCCGTCTGCGCCAAGCTCGGCGGCA
CCCGGGGTTTTGGTAACCTCACCGCCGGCACCAACGCCGCCAGCGGCTCGCTAGCCTCCG
CCGCCTCCGCCACCACCGCCTCCACCTCCACCTCCACTCCAAGCCATGGCTGCTCCCCCC
AGCCCCGCCGGCTGCCCCAAGCTGGCCGGCCTGCGCGCGGCCATGGCTGCCGCGGACGGC
GGCCGCGGCGTGTCGGCCTACCTGGTGCCCACCGAGGACCCACACATGAGCGAGTACCCG
CCCGCGCGCCTCAAGTACCGCGAGTGGATCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000094A_C01 KCC000094A_c01
         (513 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    60  5e-10
pir||A41132 collagen-related protein 1 precursor - Hydra magnipa...    65  5e-10
ref|NP_034265.1| enabled homolog; NPC derived proline rich prote...    63  8e-10
gb|AAC52865.1| neural variant mena++ protein [Mus musculus]            63  8e-10
gb|AAC52864.1| neural variant mena+ protein [Mus musculus]             63  8e-10

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 26/51 (50%), Positives = 30/51 (57%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P+ PS A P     SPP+P PP+   P PP P PP P PPL    APPSP+
Sbjct: 106 PAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPS 156

 Score = 59.3 bits (142), Expect(2) = 5e-10
 Identities = 26/54 (48%), Positives = 32/54 (59%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCP 378
           PS P+  +P     +PP+P PP+ + P PPPPP PPPPPP      PP PA  P
Sbjct: 236 PSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPP----PRPPFPANTP 285

 Score = 56.2 bits (134), Expect(2) = 5e-08
 Identities = 26/54 (48%), Positives = 29/54 (53%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCP 378
           PS PS A P     +PP+P+PPA   P PP P PP P PP     APP P   P
Sbjct: 218 PSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPP 271

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  PS + P     +PP+PTPP+   P PP P PP P PP+    APPSPA
Sbjct: 158 PVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPA 208

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 25/51 (49%), Positives = 28/51 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  PS A P      PP+P+PP    P PP P PP P PP+    APPSPA
Sbjct: 145 PLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPA 195

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 25/54 (46%), Positives = 29/54 (53%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCP 378
           P +P   +P     +PP+P PPA   PP PPPPPPP PP       PPSP   P
Sbjct: 241 PPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPP 294

 Score = 55.5 bits (132), Expect(2) = 4e-08
 Identities = 26/51 (50%), Positives = 29/51 (55%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  P S AP     SPP+P PP+   P PP P PP PP P+    APPSPA
Sbjct: 209 PPVPPSPAP----PSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPA 255

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 25/51 (49%), Positives = 28/51 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P+ PS A P     SP  P+PP+   P P PP PP P PP  A   PPSPA
Sbjct: 101 PAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPA 151

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSP 366
           PS PS A P     +PP+P+PP+   P PP P PP P PP+    +PP P
Sbjct: 119 PSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVP 168

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P +P+  +P     +PP+P PP+   P PP P PP P PP     +PPSPA
Sbjct: 93  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPA 143

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 27/50 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSP 366
           P+ PS   P      PP+P PP+   P PP P PP P PP+    APPSP
Sbjct: 171 PAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSP 220

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P +P+  +P     +PP+P PP+   P P PP PP P PP  +  APPSP+
Sbjct: 88  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPS 138

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 25/51 (49%), Positives = 26/51 (50%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  PS A P     SP  P PP+   P P PP PP P PP  A   PPSPA
Sbjct: 166 PVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPA 216

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPP---PPPPPPPPPPLQAMAAPPSPA 369
           P+ PS A P     +PP+P+PPA   P PP   PP PP P PP  +   PPSP+
Sbjct: 111 PAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPS 164

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 28/51 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  P S +P V    PP+P PP+   P P PP PP P PP  A   PPSPA
Sbjct: 157 PPVPPSPSPPV----PPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPA 203

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 30/60 (49%), Gaps = 10/60 (16%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPP----------PPPPPPLQAMAAPPSP 366
           P +P+  +P      PPAP PP +  PPPPP PP          PP PPP  A   PP+P
Sbjct: 246 PPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTP 305

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P+ PS + P      PP+P PP+   P PP P PP PP P      PPSP+
Sbjct: 132 PAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS 182

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 30/53 (55%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSP--PAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           PS PS A P     SP  P+P PP+   P PP P PP P PP  A  +PPSPA
Sbjct: 76  PSPPSPAPPSPAPPSPAPPSPAPPS---PAPPSPAPPSPAPPSPAPPSPPSPA 125

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 205 CRRRPSAPSSAAPGVLVTSP--PAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           C   P+ PS A P     SP  P+P PP+   P PP P PP PP P     APPSPA
Sbjct: 39  CPPSPAPPSPAPPSPAPPSPAPPSPAPPS---PGPPSPAPPSPPSPAPPSPAPPSPA 92

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 25/54 (46%), Positives = 26/54 (47%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCP 378
           P  PS A P     SP  P PP    PPPPPPP PP P       +PPSP   P
Sbjct: 244 PVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSP 297

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 25/51 (49%), Positives = 28/51 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  PS A P      PP+P PP+   P PP P PP PP P  A  +PPSPA
Sbjct: 184 PVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSP--APPSPPSPA 232

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQA--MAAPPSPA 369
           P+ PS   P     SPP+P PP+   P PP P PP P PP  A    APPSPA
Sbjct: 63  PAPPSPGPPSPAPPSPPSPAPPS---PAPPSPAPPSPAPPSPAPPSPAPPSPA 112

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCP 378
           P  P S +P   V   PAP PP+   P P P PPP P PP  + +  PSP+  P
Sbjct: 302 PPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSP 355

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQA--MAAPPSPA 369
           P +P+  +P     +PP+P PP+   P PP P PP P PP  A    APPSPA
Sbjct: 50  PPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPA 102

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQA--MAAPPSPA 369
           P +P+  +P      PP+P PP+   P PP P PP P PP  A    APPSPA
Sbjct: 55  PPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPA 107

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQA--MAAPPSPA 369
           P  PS A P     +PP+P PP+   P PP P PP P PP  A    APPSPA
Sbjct: 68  PGPPSPAPPSPPSPAPPSPAPPS---PAPPSPAPPSPAPPSPAPPSPAPPSPA 117

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPP------PPPPPPPLQAMAAPPSP 366
           P+ PS A P     +PP+P PP    P PP PP      PP P PP  +  APPSP
Sbjct: 189 PAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSP 244

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVT----SPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCPKL 384
           PS P S AP    T    SPP+P PP+    PP P PP P P P     APP+P+  P  
Sbjct: 291 PSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSP-PPSPAPPTPSPSPSP 349

Query: 385 AGLRAAMAAADGGRGVSAYLVPTEDPHMSEYPPA 486
           +   +   +       S   +P+  P  S  P A
Sbjct: 350 SPSPSPSPSPSPSPSPSPSPIPSPSPKPSPSPVA 383

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P +P+  +P     +PP+P PP+   P P PP P PP PP  A  +P  PA
Sbjct: 83  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPA 133

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 220 SAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPP-------PPLQAMAAPPSPA 369
           SA +   PG +   PP+P PP+   P P PP P PP        PP  A  +PPSPA
Sbjct: 26  SANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPA 82

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 25/56 (44%), Positives = 28/56 (49%), Gaps = 2/56 (3%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPP--PPPPPPLQAMAAPPSPAGCP 378
           P  PS  +P      PP+P PP    PP P PP   PP P P+    APPSPA  P
Sbjct: 285 PMPPSPPSP------PPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSP 334

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPP---PPPPLQAMAAPPSP 366
           P  PS A P     +PP+P  PA   PP P PP PP   PP P     APPSP
Sbjct: 210 PVPPSPAPPSPPSPAPPSPPSPA---PPSPSPPAPPSPVPPSPAPPSPAPPSP 259

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 24/52 (46%), Positives = 26/52 (49%), Gaps = 1/52 (1%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTP-PAAR*PPPPPPPPPPPPPPLQAMAAPPSPA 369
           P  P   A   +  SPP+P P PA   PP PP P PP P P      PPSPA
Sbjct: 275 PPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPA 326

 Score = 41.2 bits (95), Expect = 0.008
 Identities = 23/71 (32%), Positives = 32/71 (44%), Gaps = 4/71 (5%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPP----AAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCPKL 384
           P  PS A P    + PP+P PP    +    P P P P P P P  + +  PSP+  P  
Sbjct: 320 PVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSP 379

Query: 385 AGLRAAMAAAD 417
           + +   +  AD
Sbjct: 380 SPVAVKLVWAD 390

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 26/62 (41%), Positives = 28/62 (44%), Gaps = 8/62 (12%)
 Frame = +1

Query: 208 RRRPSAPSSAAPGVL------VTSPPAPTPPAAR*PPPPPPPPPPPPPPLQA--MAAPPS 363
           RR+ +AP   A  VL      V S  A   P      PP P PP P PP  A    APPS
Sbjct: 3   RRQHAAPLVGAVNVLMVVLAFVASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPS 62

Query: 364 PA 369
           PA
Sbjct: 63  PA 64

 Score = 25.8 bits (55), Expect(2) = 5e-10
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 353 LPPAPPAAPSWPACARPWLPRTAAAACRPTWCPP 454
           +PP+PP+ P  PA   P  P T  +   P+  PP
Sbjct: 286 MPPSPPSPPPSPA---PPTPPTPPSPSPPSPVPP 316

 Score = 23.1 bits (48), Expect(2) = 4e-08
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 356 PPAPPAAPSWPACARPWLPRTAAAACRPTWCPP 454
           PPAPP  PS P    P  P  A     P+  PP
Sbjct: 261 PPAPPPPPSPPPPPPPRPPFPANTPMPPS--PP 291

 Score = 21.9 bits (45), Expect(2) = 5e-08
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 359 PAPPAAPSWPACARPWLPRTAAAACRPTWCPP 454
           P PP +P  P   RP  P        P   PP
Sbjct: 264 PPPPPSPPPPPPPRPPFPANTPMPPSPPSPPP 295

>pir||A41132 collagen-related protein 1 precursor - Hydra magnipapillata
           gi|9447|emb|CAA43379.1| mini-collagen [Hydra sp.]
          Length = 149

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 40/102 (39%), Positives = 47/102 (45%), Gaps = 3/102 (2%)
 Frame = +1

Query: 94  RL**ACVACRQSRAVSAQQGGVLLRWRPPCGVLCRACCRRRPSAPSSAAPGVLVTSPPAP 273
           RL  AC+    +   +     +L R   PCG  C + C     AP+ A    +   PP P
Sbjct: 4   RLVLACLVLGVAATQAKTLHEMLKRDANPCGSYCPSVC-----APACAP---VCCYPPPP 55

Query: 274 TPPAAR*PPPPPPPPPPPPPPLQAMAAP---PSPAGCPKLAG 390
            PP    PPPPPPPPPPPP PL     P   P P G P  AG
Sbjct: 56  PPPPPPPPPPPPPPPPPPPAPLPGNPGPPGRPGPPGAPGPAG 97

 Score = 39.7 bits (91), Expect = 0.023
 Identities = 22/54 (40%), Positives = 23/54 (41%), Gaps = 1/54 (1%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPL-QAMAAPPSPAGC 375
           P AP  A P  L   P  P  P     P  P PPPPP PP+  A   P  P  C
Sbjct: 90  PGAPGPAGPPGLPGPPGPPGAPGQGGLPGQPAPPPPPCPPVCVAQCVPTCPQYC 143

>ref|NP_034265.1| enabled homolog; NPC derived proline rich protein 1 [Mus musculus]
           gi|30179826|sp|Q03173|ENAH_MOUSE Enabled protein homolog
           (NPC derived proline-rich protein 1) (NDPP-1)
           gi|1644461|gb|AAC52866.1| neural variant mena+++ protein
           [Mus musculus]
          Length = 802

 Score = 62.8 bits (151), Expect(2) = 8e-10
 Identities = 36/90 (40%), Positives = 42/90 (46%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCPKLAGLR 396
           P+AP+ +   V     P PT   A  PPPPPPPPPPPPPPL     PP P   P LA L 
Sbjct: 417 PTAPNGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPPPPL-----PPPP--LPPLASLS 469

Query: 397 AAMAAADGGRGVSAYLVPTEDPHMSEYPPA 486
              + A    G      P+  P +   P A
Sbjct: 470 HCGSQASPPPGTPLASTPSSKPSVLPSPSA 499

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 52/146 (35%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
 Frame = +1

Query: 43  ASAFCPLAPQTLLHCSSRL**ACVACRQSRAVSAQQGGVLLRWRPPCGVLCRACCRRRPS 222
           ASA  PL P+  L  SS       A  Q       QG VL    PP            P 
Sbjct: 503 ASAETPLNPE--LGDSSASEPGLQAASQPAESPTPQGLVLGPPAPP------------PP 548

Query: 223 APSSAAPGVLVTSPPAPTPPAAR*PPP-----PPPPPPPPPP-PLQAMAAPPSPAGCP-- 378
            P  + P      PP P PP    PPP     PPPPPPPPPP P QA   PP P   P  
Sbjct: 549 PPLPSGPAYASALPPPPGPPP---PPPLPSTGPPPPPPPPPPLPNQAPPPPPPPPAPPLP 605

Query: 379 --------------KLAGLRAAMAAA 414
                          L GL AA+A A
Sbjct: 606 ASGIFSGSTSEDNRPLTGLAAAIAGA 631

 Score = 21.6 bits (44), Expect(2) = 8e-10
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +3

Query: 51  VLPSCTTNPSPLLFPSVMSLRG 116
           VLP C ++P P + PS  +  G
Sbjct: 401 VLPVCVSSPVPQMPPSPTAPNG 422

>gb|AAC52865.1| neural variant mena++ protein [Mus musculus]
          Length = 787

 Score = 62.8 bits (151), Expect(2) = 8e-10
 Identities = 36/90 (40%), Positives = 42/90 (46%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCPKLAGLR 396
           P+AP+ +   V     P PT   A  PPPPPPPPPPPPPPL     PP P   P LA L 
Sbjct: 402 PTAPNGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPPPPL-----PPPP--LPPLASLS 454

Query: 397 AAMAAADGGRGVSAYLVPTEDPHMSEYPPA 486
              + A    G      P+  P +   P A
Sbjct: 455 HCGSQASPPPGTPLASTPSSKPSVLPSPSA 484

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 52/146 (35%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
 Frame = +1

Query: 43  ASAFCPLAPQTLLHCSSRL**ACVACRQSRAVSAQQGGVLLRWRPPCGVLCRACCRRRPS 222
           ASA  PL P+  L  SS       A  Q       QG VL    PP            P 
Sbjct: 488 ASAETPLNPE--LGDSSASEPGLQAASQPAESPTPQGLVLGPPAPP------------PP 533

Query: 223 APSSAAPGVLVTSPPAPTPPAAR*PPP-----PPPPPPPPPP-PLQAMAAPPSPAGCP-- 378
            P  + P      PP P PP    PPP     PPPPPPPPPP P QA   PP P   P  
Sbjct: 534 PPLPSGPAYASALPPPPGPPP---PPPLPSTGPPPPPPPPPPLPNQAPPPPPPPPAPPLP 590

Query: 379 --------------KLAGLRAAMAAA 414
                          L GL AA+A A
Sbjct: 591 ASGIFSGSTSEDNRPLTGLAAAIAGA 616

 Score = 21.6 bits (44), Expect(2) = 8e-10
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +3

Query: 51  VLPSCTTNPSPLLFPSVMSLRG 116
           VLP C ++P P + PS  +  G
Sbjct: 386 VLPVCVSSPVPQMPPSPTAPNG 407

>gb|AAC52864.1| neural variant mena+ protein [Mus musculus]
          Length = 783

 Score = 62.8 bits (151), Expect(2) = 8e-10
 Identities = 36/90 (40%), Positives = 42/90 (46%)
 Frame = +1

Query: 217 PSAPSSAAPGVLVTSPPAPTPPAAR*PPPPPPPPPPPPPPLQAMAAPPSPAGCPKLAGLR 396
           P+AP+ +   V     P PT   A  PPPPPPPPPPPPPPL     PP P   P LA L 
Sbjct: 398 PTAPNGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPPPPL-----PPPP--LPPLASLS 450

Query: 397 AAMAAADGGRGVSAYLVPTEDPHMSEYPPA 486
              + A    G      P+  P +   P A
Sbjct: 451 HCGSQASPPPGTPLASTPSSKPSVLPSPSA 480

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 52/146 (35%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
 Frame = +1

Query: 43  ASAFCPLAPQTLLHCSSRL**ACVACRQSRAVSAQQGGVLLRWRPPCGVLCRACCRRRPS 222
           ASA  PL P+  L  SS       A  Q       QG VL    PP            P 
Sbjct: 484 ASAETPLNPE--LGDSSASEPGLQAASQPAESPTPQGLVLGPPAPP------------PP 529

Query: 223 APSSAAPGVLVTSPPAPTPPAAR*PPP-----PPPPPPPPPP-PLQAMAAPPSPAGCP-- 378
            P  + P      PP P PP    PPP     PPPPPPPPPP P QA   PP P   P  
Sbjct: 530 PPLPSGPAYASALPPPPGPPP---PPPLPSTGPPPPPPPPPPLPNQAPPPPPPPPAPPLP 586

Query: 379 --------------KLAGLRAAMAAA 414
                          L GL AA+A A
Sbjct: 587 ASGIFSGSTSEDNRPLTGLAAAIAGA 612

 Score = 21.6 bits (44), Expect(2) = 8e-10
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +3

Query: 51  VLPSCTTNPSPLLFPSVMSLRG 116
           VLP C ++P P + PS  +  G
Sbjct: 382 VLPVCVSSPVPQMPPSPTAPNG 403



EST assemble image


clone accession position
1 LCL012d02_r AV626616 1 520
2 LCL067b06_r AV629833 14 367
3 CL04e04_r AV393393 33 383




Chlamydomonas reinhardtii
Kazusa DNA Research Institute