Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000092A_C01 KCC000092A_c01
(815 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_682693.1| ORF_ID:tll1903~unknown protein [Thermosynechoco... 129 4e-29
gb|AAC82365.1| unknown [Myxococcus xanthus] 78 2e-13
ref|ZP_00091362.1| COG2192: Predicted carbamoyl transferase, Nod... 72 8e-12
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 70 5e-11
ref|ZP_00007740.1| COG0845: Membrane-fusion protein [Rhodobacter... 69 7e-11
>ref|NP_682693.1| ORF_ID:tll1903~unknown protein [Thermosynechococcus elongatus BP-1]
gi|22295629|dbj|BAC09455.1| ORF_ID:tll1903~unknown
protein [Thermosynechococcus elongatus BP-1]
Length = 556
Score = 129 bits (325), Expect = 4e-29
Identities = 96/272 (35%), Positives = 131/272 (47%), Gaps = 3/272 (1%)
Frame = +2
Query: 2 KGSDEDQNLVVGEMLTSVAVPATYIHRLASSLRQLAASGKVAALPTRTAASGQKVVQVYP 181
KG D Q L GE T+ P I +L L L RTA +GQ + ++ P
Sbjct: 61 KGIDP-QGLWAGEEWTTG--PLGLILKLDHYLYALRHEATPPVRRWRTAPTGQAIAEIVP 117
Query: 182 VTWSDRNSLLQPGATAELYLRPEQAEVRQGLVYG---PDGRVAEHDGRLCAVLGAGNHGF 352
W +R LL G AE++L+P QG Y P G + VLGAGN
Sbjct: 118 RNWQER--LLWFGVKAEVWLQPNHPPT-QGSAYRNPPPPG--------VAVVLGAGNITS 166
Query: 353 LALKDALVCLYERGEVAAIKPHPAQSEWHRAAEYALQPLIEAGYLRNLYLDSAEDTRALL 532
L L DAL L VA +K +P + PLIEAG+L + D+A L
Sbjct: 167 LCLADALYQLVVANRVALLKMNPLLAPLTDCFRKVCAPLIEAGFLEIVEGDAALG-EVLC 225
Query: 533 YHPLVDCVHMTGGTATHDAIVWGSTPEEQARRRAADDPVLKVPITSELGCITPFIIPPWS 712
+HPL +H+TG T++ +VWG T EQA R+A P L P+T+ELG +TP ++ P
Sbjct: 226 HHPLTQHIHITGSHHTYNRLVWGETAAEQALRKARQQPKLTKPVTAELGNVTPLLMVPGE 285
Query: 713 YTPKQLEAQAADLVVAMTSNVGCNCNSAKVLV 808
+T +L QA + A+ N NC A++LV
Sbjct: 286 WTESELAYQARQVASALVHNASFNCIGAQILV 317
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 77.8 bits (190), Expect = 2e-13
Identities = 86/252 (34%), Positives = 95/252 (37%), Gaps = 44/252 (17%)
Frame = -1
Query: 626 GGPAPQAWSPTRWRRAWRCRPSCARSPPGGGTAARGCPRRCPGTDCAGSRPR*AAAGRTP 447
G PAP P + R P PP TA+ P+ PG CA P + R
Sbjct: 12 GTPAPGRPFPPPCLLSERTPPGAR--PPPTETASYPPPQAVPGP-CAPRAPPRSPPPRRR 68
Query: 446 RRG----------ATRSGRGAA*WPPPRRARTGTPARP*APGSRGCPPPARRTGGR---- 309
RG A RSGR P P R PA P SR C PP + T R
Sbjct: 69 HRGSRHRSFRPTCARRSGRRC---PAPSRHARRNPAGP----SRRCGPPRKSTPTRCCTP 121
Query: 308 -RAPPPCR-RGRTQAPAALRPAPAAGTARRWHPAAAGCC---------GRTR*QGTPAPP 162
APP CR R AP+A R P AG + A+GCC G T P+PP
Sbjct: 122 CPAPPRCRARPSAPAPSAGRTCPTAGPSS----CASGCCPTGRCGSAPGPTPHGAEPSPP 177
Query: 161 SA----------------PRPRCVWAA---PPPCRWPPAAAGCWPGGGCRWRARPRTSAS 39
S PRP AA P C PP G PG GC A P TSAS
Sbjct: 178 SQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGR-PGTGCARTAPPSTSAS 236
Query: 38 RPPPGSGPHLSP 3
PPP P P
Sbjct: 237 HPPPPRSPGTPP 248
Score = 70.5 bits (171), Expect = 3e-11
Identities = 84/266 (31%), Positives = 103/266 (38%), Gaps = 32/266 (12%)
Frame = +3
Query: 51 PWPC--------PPPTSTAWPAACGSWRPAAR---WRRCP----HAPRPRGRRWCRCTLS 185
P PC PPP + S+RP RRCP HA R RC
Sbjct: 51 PGPCAPRAPPRSPPPRRRHRGSRHRSFRPTCARRSGRRCPAPSRHARRNPAGPSRRCGPP 110
Query: 186 PGPTATACCSRVP-PPSCTCGRSRPKCGRGLCTAPTAGWRSTTAACAPCWGRATTASWRS 362
T T CC+ P PP C S P G T PTAG S + C P GR +A +
Sbjct: 111 RKSTPTRCCTPCPAPPRCRARPSAPAPSAGR-TCPTAGPSSCASGCCPT-GRCGSAPGPT 168
Query: 363 RTRWCACTSAARWRPSSRTP---PRASGTAPRSTPCSRSSRPATCAICTWTAPR--TPAR 527
A P S++P P +SG R+ P RPA + TAP P R
Sbjct: 169 -------PHGAEPSPPSQSPSPAPASSGGRRRTHP-----RPARASAAGATAPACLPPPR 216
Query: 528 CCTTPWWTACT*RAAPPRTT----PSCGAPRLRSRPAAAPLTTPCSRCPSLRSWAASPPS 695
CC P T C R APP T+ P +P R + +P P P+ R PP
Sbjct: 217 CCGRP-GTGCA-RTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAPPSPACR----PPPP 270
Query: 696 SSRP---GATRPS----SWRRRRRTW 752
+ P A P+ S R+R TW
Sbjct: 271 GTTPAPRNAALPALPCISPSRQRATW 296
Score = 66.2 bits (160), Expect = 6e-10
Identities = 96/301 (31%), Positives = 114/301 (36%), Gaps = 37/301 (12%)
Frame = -1
Query: 806 PAPWRC----CSCSPRCWSWRPPG--PPPAPPAAWACSSRAG**RG*CSPAPK*WAP*AR 645
PAP R C S R PPG PPP A++ G C+P +P R
Sbjct: 14 PAPGRPFPPPCLLSERT----PPGARPPPTETASYPPPQAVP---GPCAPRAPPRSPPPR 66
Query: 644 GRQRRGGGPAPQAWSPTRWRRAWRCRPSC---ARSPPGGGTAARGCPRRCPGTDCAGSRP 474
R R G +++ PT RR+ R P+ AR P G + G PR+ T C P
Sbjct: 67 RRHR---GSRHRSFRPTCARRSGRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCCTPCP 123
Query: 473 R*AAAGRTPRRGATRSGRGAA*WPPPRRARTGTPARP*APGSRGCPPPARRTGGRRAPPP 294
PR A S P P RT A P + S CP R G AP P
Sbjct: 124 A------PPRCRARPSA------PAPSAGRTCPTAGPSSCASGCCP--TGRCGS--APGP 167
Query: 293 CRRGRTQAPAALRPAPA---AGTARRWHP-----AAAG-----------CCGRTR*QGT- 174
G +P + P+PA +G RR HP +AAG CCGR GT
Sbjct: 168 TPHGAEPSPPSQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRP---GTG 224
Query: 173 ---PAPPSA-----PRPRCVWAAPPPCRWPPAAAGCWPGGGCRWRARPRTSASRPPPGSG 18
APPS P PR PP PAAA P CR PPPG+
Sbjct: 225 CARTAPPSTSASHPPPPRSP-GTPPRASGSPAAAPAPPSPACR----------PPPPGTT 273
Query: 17 P 15
P
Sbjct: 274 P 274
Score = 50.1 bits (118), Expect = 4e-05
Identities = 78/272 (28%), Positives = 94/272 (33%), Gaps = 29/272 (10%)
Frame = -1
Query: 815 QAAPAPWRCCSCSPRCWSWRPPGPPPAPPAAWACSSRAG**RG*CS-------PAPK*WA 657
QA P P C+PR PP PP P SR R C+ PAP
Sbjct: 48 QAVPGP-----CAPRA----PPRSPP--PRRRHRGSRHRSFRPTCARRSGRRCPAP---- 92
Query: 656 P*ARGRQRRGGGPA-----PQAWSPTRWRRAWRCRPSC-ARSPPGGGTAARGCPRRCPGT 495
+R +R GP+ P+ +PTR P C AR +A R CP P +
Sbjct: 93 --SRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRCRARPSAPAPSAGRTCPTAGPSS 150
Query: 494 DCAGSRPR*---AAAGRTPRRGATRSGRGAA*WPPP-----RRARTGTPARP*APGSRG- 342
+G P +A G TP GA S + P P RR PAR A G+
Sbjct: 151 CASGCCPTGRCGSAPGPTPH-GAEPSPPSQSPSPAPASSGGRRRTHPRPARASAAGATAP 209
Query: 341 -CPPPARRTG------GRRAPPPCRRGRTQAPAALRPAPAAGTARRWHPAAAGCCGRTR* 183
C PP R G R APP P + P A + PA R
Sbjct: 210 ACLPPPRCCGRPGTGCARTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAPPSPACRP-- 267
Query: 182 QGTPAPPSAPRPRCVWAAPPPCRWPPAAAGCW 87
P P + P PR PC P W
Sbjct: 268 ---PPPGTTPAPRNAALPALPCISPSRQRATW 296
Score = 47.8 bits (112), Expect = 2e-04
Identities = 69/224 (30%), Positives = 80/224 (34%), Gaps = 15/224 (6%)
Frame = +3
Query: 186 PGPTATACCSRVPPPSCTCGRSRPKCGRGLCTAPTAGWRSTTAACAPCWGRATTASWRSR 365
PGP A R PPP R R + R PT RS AP
Sbjct: 51 PGPCAPRAPPRSPPP-----RRRHRGSRHRSFRPTCARRSGRRCPAPS------------ 93
Query: 366 TRWCACTSAARWRPSSRTPPRASGTAPRSTPCSRSSRPATCAICTWTAPRTPARCCT-TP 542
R + R P +G + R P +S TP RCCT P
Sbjct: 94 ------------RHARRNP---AGPSRRCGPPRKS---------------TPTRCCTPCP 123
Query: 543 WWTACT*RAAPPRTTPSCGAPRLRSRPAAAPLTTPCSRCPSLRSWAA----------SPP 692
C RA P PS G R+ P A P + CP+ R +A SPP
Sbjct: 124 APPRC--RARPSAPAPSAG----RTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPP 177
Query: 693 SSSRPGATRPSSWRRRRRTWWSP*PATWAATATAPRCW----CC 812
S S A P+S RRRT P A+ AA ATAP C CC
Sbjct: 178 SQSPSPA--PASSGGRRRTHPRPARAS-AAGATAPACLPPPRCC 218
Score = 39.3 bits (90), Expect = 0.077
Identities = 37/113 (32%), Positives = 46/113 (39%), Gaps = 7/113 (6%)
Frame = +1
Query: 220 CHRRAVPAAGAGRSAAGACVRPRRQGGGARRPPVRRAGGGQPR------LPGAQGRAGVP 381
CH P GR C+ R GAR PP A P+ P A R+ P
Sbjct: 10 CHGTPAP----GRPFPPPCLLSERTPPGARPPPTETASYPPPQAVPGPCAPRAPPRSPPP 65
Query: 382 VRARRGGGHQA-APRPERVAPRRGVRPAAAHRGRLPAQSVPGQRRGHPRAAVP 537
R RG H++ P R + RR P + H R PA P +R G PR + P
Sbjct: 66 RRRHRGSRHRSFRPTCARRSGRRCPAP-SRHARRNPAG--PSRRCGPPRKSTP 115
>ref|ZP_00091362.1| COG2192: Predicted carbamoyl transferase, NodU family [Azotobacter
vinelandii]
Length = 1081
Score = 72.4 bits (176), Expect = 8e-12
Identities = 70/205 (34%), Positives = 78/205 (37%), Gaps = 28/205 (13%)
Frame = +1
Query: 16 GPE----PGGGRDADVR--------GRARHLHPP----------PGQQPAAAG----GQR 117
GPE GGGR A VR G RH P PGQ A G G+R
Sbjct: 118 GPERGLATGGGRAAAVRRPAGGTRRGSGRHRRPARRGTLAGRHAPGQPAAPRGPAVRGRR 177
Query: 118 QGGGAAHTHRGLGAEGGAGVPCHLVRPQQPAAAGCHRRAVPAAGAGRSAAGACVRPRRQG 297
+ G + A GAG P L+RP A HR A AG+ A QG
Sbjct: 178 RCGAGTDARQAAVARAGAGEPRRLLRPVPGRARALHRGTAGALPAGQRRARPAAGGAAQG 237
Query: 298 G--GARRPPVRRAGGGQPRLPGAQGRAGVPVRARRGGGHQAAPRPERVAPRRGVRPAAAH 471
G GA P R +PRL Q RA AR G + APR A RP AH
Sbjct: 238 GCQGAPLAPARLPRQARPRLHPVQ-RA-----ARAHGAARGAPRQRGPAAPAAGRPGCAH 291
Query: 472 RGRLPAQSVPGQRRGHPRAAVPPPG 546
R Q G+ RG R P PG
Sbjct: 292 RAGTHLQDRRGRHRGTDRIVRPDPG 316
Score = 52.4 bits (124), Expect = 9e-06
Identities = 64/204 (31%), Positives = 70/204 (33%), Gaps = 6/204 (2%)
Frame = +1
Query: 85 GQQPAAAGGQRQGGGAAHTHR---GLGAEGGAGVP-CHLVRPQQPAAAGCHRRAVPAAGA 252
G+ PA A R+ G T R G A AG C R +PA AG A
Sbjct: 15 GRPPAGAATVRRIGRRRRTGRLASGQPAARAAGTTLCRSRRVARPAGAGQAFGRRQGVAA 74
Query: 253 GRSAAGACVRPRRQGGGARRPPVRRAGGGQPRLPGAQGRAGVPVRARRGGGHQAAPRPER 432
+ A C RR G P R AG G+ RL VR R G P PER
Sbjct: 75 FPARAEGCAPARRPAAGHAAPARRGAGRGRGRLAA--------VRVSRRG-----PGPER 121
Query: 433 VAPRRGVRPAAAHRGRLPAQSVPGQRRGHPRAAVPPPGGLRAHDGRHRHARRH--RVGLH 606
G R AA R P GG R GRHR R G H
Sbjct: 122 GLATGGGRAAAVRR---------------------PAGGTRRGSGRHRRPARRGTLAGRH 160
Query: 607 A*GAGPPPRR*RPRAQGAHHFGAG 678
A G PR P +G GAG
Sbjct: 161 APGQPAAPR--GPAVRGRRRCGAG 182
Score = 46.6 bits (109), Expect = 5e-04
Identities = 56/174 (32%), Positives = 64/174 (36%), Gaps = 17/174 (9%)
Frame = -1
Query: 569 RPSCARSPPGGGTAARG--------CPRRCPGTD----CAGSRPR*AAAGRTPRRGATRS 426
RP+ + P A RG RR PG + G R AAA R P G TR
Sbjct: 87 RPAAGHAAPARRGAGRGRGRLAAVRVSRRGPGPERGLATGGGR---AAAVRRPA-GGTRR 142
Query: 425 GRGAA*WPPPR-----RARTGTPARP*APGSRGCPPPARRTGGRRAPPPCRRGRTQAPAA 261
G G P R R G PA P P RG T R+A R G +
Sbjct: 143 GSGRHRRPARRGTLAGRHAPGQPAAPRGPAVRGRRRCGAGTDARQA-AVARAGAGEPRRL 201
Query: 260 LRPAPAAGTARRWHPAAAGCCGRTR*QGTPAPPSAPRPRCVWAAPPPCRWPPAA 99
LRP P G AR H AG + + PA A + C A P R P A
Sbjct: 202 LRPVP--GRARALHRGTAGALPAGQRRARPAAGGAAQGGCQGAPLAPARLPRQA 253
Score = 40.4 bits (93), Expect = 0.035
Identities = 50/180 (27%), Positives = 63/180 (34%), Gaps = 44/180 (24%)
Frame = +1
Query: 52 RGRARHLHPPPGQQP--------------------AAAGGQRQGGGAAHTHRGLGAEGGA 171
RG R + P PG+Q A G + G + H H A
Sbjct: 305 RGTDRIVRPDPGRQALQHQGLRPLAQTLLAAQPWLAQLGRGQSPGFSRHPH----AAPAG 360
Query: 172 GVPCHLVRPQQPAAAGC-------HRRAVPAA----GAGRSAAGACVRPRRQGGGARRPP 318
G L+R + C + RA+ A AGR AAGA RR A +P
Sbjct: 361 GARTALLRAARARLPDCRILRRAGYTRALSAVPGRRAAGRGAAGAGAAVRRPAARAHQP- 419
Query: 319 VRRAGGGQPRLPG-------------AQGRAGVPVRARRGGGHQAAPRPERVAPRRGVRP 459
RR+ G QP L G A GR + R RRG +A +R P RP
Sbjct: 420 -RRSEGQQPALAGRPLAADRLGCAGTASGRRPLRARLRRGPCTLSAQLADRFGPAPAARP 478
Score = 39.7 bits (91), Expect = 0.059
Identities = 52/160 (32%), Positives = 59/160 (36%), Gaps = 25/160 (15%)
Frame = -1
Query: 548 PPGGGTAARGCPRRCPGTDCAGSRPR*AAAGRT---PRRGATRSG--------RGAA*WP 402
PP G R RR A +P AAG T RR A +G +G A +P
Sbjct: 17 PPAGAATVRRIGRRRRTGRLASGQPAARAAGTTLCRSRRVARPAGAGQAFGRRQGVAAFP 76
Query: 401 -------PPRRARTG--TPARP*APGSRGCPPPARRTGGRRAPPPCR---RGRTQAPAAL 258
P RR G PAR A RG R + RR P P R G +A A
Sbjct: 77 ARAEGCAPARRPAAGHAAPARRGAGRGRGRLAAVRVS--RRGPGPERGLATGGGRAAAVR 134
Query: 257 RPAPAA--GTARRWHPAAAGCCGRTR*QGTPAPPSAPRPR 144
RPA G+ R PA G G PA P P R
Sbjct: 135 RPAGGTRRGSGRHRRPARRGTLAGRHAPGQPAAPRGPAVR 174
Score = 38.9 bits (89), Expect = 0.10
Identities = 67/213 (31%), Positives = 73/213 (33%), Gaps = 30/213 (14%)
Frame = -1
Query: 677 PAPK*WAP*ARGRQRRGG----------GPAPQAWSPTRWRRAWRCRPSCARSPPGGGTA 528
PA AP RG R G GP P+ T RA + R P GG
Sbjct: 88 PAAGHAAPARRGAGRGRGRLAAVRVSRRGPGPERGLATGGGRA-----AAVRRPAGGTRR 142
Query: 527 ARGCPRRCP--GTDCAGSRPR*AAAGRTPR-RGATRSGRGA-A*WPPPRRARTGTPARP* 360
G RR GT P AA R P RG R G G A RA G P R
Sbjct: 143 GSGRHRRPARRGTLAGRHAPGQPAAPRGPAVRGRRRCGAGTDARQAAVARAGAGEPRRLL 202
Query: 359 AP----------GSRGCPPPARRTGGRRAPPPCRRGRTQAPAALRPAPAAGTAR-RWHPA 213
P G+ G P +R A + G AP A PA AR R HP
Sbjct: 203 RPVPGRARALHRGTAGALPAGQRRARPAAGGAAQGGCQGAPLA--PARLPRQARPRLHPV 260
Query: 212 -----AAGCCGRTR*QGTPAPPSAPRPRCVWAA 129
A G Q PA P+A RP C A
Sbjct: 261 QRAARAHGAARGAPRQRGPAAPAAGRPGCAHRA 293
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 69.7 bits (169), Expect = 5e-11
Identities = 87/286 (30%), Positives = 96/286 (33%), Gaps = 35/286 (12%)
Frame = -1
Query: 755 PPGPPPAPPAAWACSSRAG**RG*CSPAPK*WAP*ARGRQRRGGGPAPQAWSPT------ 594
P PPPAPPAA + PAP P A Q P P A PT
Sbjct: 134 PTPPPPAPPAARPAPT---------PPAP----PPAAAPQHAPPPPPPPAARPTPTPPPP 180
Query: 593 -------RWRRAWRCRPSCARSPPGGGTAARGCPRRC--------PGTDCAGSRPR*AAA 459
R A P+ PP TA G P P + A
Sbjct: 181 PPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAP 240
Query: 458 GRTPRRGATRSGRGAA*WPPPRRARTGTP---ARP*APGSRGCPPPARRTGGRRAPPPCR 288
G TP GA +GR A PP R G+P P APG+ P GG PP R
Sbjct: 241 GSTP--GAPPAGRPGA---PPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGR 295
Query: 287 RG--RTQAPAALRPAPAAGTARRWHPAAAGCC----GRTR*QGTPAPPSAPRPRCVWAAP 126
G T AP A PAP A PA G GR TP P P AA
Sbjct: 296 PGPASTPAPGAATPAPTA------TPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAG 349
Query: 125 PPCRWPPAAAG-----CWPGGGCRWRARPRTSASRPPPGSGPHLSP 3
P PP A G P G P ++A+ PPP P
Sbjct: 350 TPAA-PPQAGGLPARPAAPAGAAAPSTVPGSAAATPPPNRAQFAPP 394
Score = 60.8 bits (146), Expect = 2e-08
Identities = 86/298 (28%), Positives = 93/298 (30%), Gaps = 33/298 (11%)
Frame = -1
Query: 812 AAPAPWRCCSCSPRCWSWRPPGPPPAPPAAWACSSRAG**RG*CSPAPK*WA------P* 651
AA P + P RP PPP PP A + P P A P
Sbjct: 73 AAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPP-------PPPPPPAAPKQPSPPP 125
Query: 650 ARGRQRRGGGPAPQAWSPTRWRRAWRCRPSCA----RSPPGGGTAARGCPRRCPGTDCA- 486
A Q+ P P A R P A PP AAR P P
Sbjct: 126 AAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGP 185
Query: 485 GSRPR*A-----------AAGRTPRRGATRSGRGAA*WPPPRRARTGTPARP*APGSRGC 339
+RP A A T R G+ A P P T P APGS
Sbjct: 186 AARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPG 245
Query: 338 PPPARRTGGRRAPPPCRRGRTQAPAALRPAPAAGTARRWHPAAAGCCGRTR*QGTPAPPS 159
PPA R G APPP R + A PAP A A PA G T G P P S
Sbjct: 246 APPAGRPG---APPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTA--TPPSGRPGPAS 300
Query: 158 APRPRCVWAAP-----------PPCRWPPAAAGCWPGGGCRWRARPRTSASRPPPGSG 18
P P AP PP P A P GG P PP +G
Sbjct: 301 TPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAG 358
Score = 60.1 bits (144), Expect = 4e-08
Identities = 75/252 (29%), Positives = 84/252 (32%), Gaps = 5/252 (1%)
Frame = -1
Query: 755 PPGPPPAPPAAWACSSRAG**RG*CSPAPK*WAP*ARGRQRRGGGPAPQAWSPTRWRRAW 576
PP PP APP A A A +P P P AR PAP P
Sbjct: 76 PPHPPAAPPPAAAPPRPA-------APPPPPPPPAAR--------PAPPPPPPP------ 114
Query: 575 RCRPSCAR--SPPGGGTAARGCPRRCPGTDCAGSRPR*AAAGRTPRRGATRSGRGAA*WP 402
P+ + SPP + P P P A TP + A P
Sbjct: 115 ---PAAPKQPSPPPAAAPQQHAPTPPP------PAPPAARPAPTPPAPPPAAAPQHAPPP 165
Query: 401 PPRRARTGTPARP*APGSRGCPPPARRTGGRRAPPPCRRGRTQAPAALRPAPAAGTARRW 222
PP A TP P PPP R P P T P + P PAA TAR
Sbjct: 166 PPPPAARPTPTPP--------PPPPAGPAARPTPAP-----TATPTPVAPPPAAPTARPG 212
Query: 221 HPAAAGCCGRT---R*QGTPAPPSAPRPRCVWAAPPPCRWPPAAAGCWPGGGCRWRARPR 51
PA A T TPAP + P P APP R G PG P
Sbjct: 213 SPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGS-------PP 265
Query: 50 TSASRPPPGSGP 15
+ S P PG+ P
Sbjct: 266 AAGSPPAPGATP 277
Score = 52.8 bits (125), Expect = 7e-06
Identities = 88/288 (30%), Positives = 96/288 (32%), Gaps = 41/288 (14%)
Frame = -1
Query: 755 PPGPPPAPPAAWACSSRAG**RG*CSPAPK*WAP*ARGRQRRGGGPAPQAWSPTRWRRAW 576
PP PPPA PAA + +P P AP R G PAP A A
Sbjct: 177 PPPPPPAGPAARPTPAPTA------TPTPV--APPPAAPTARPGSPAPAATPAPTPTPAP 228
Query: 575 RCRPSCARSPPGGGTAARGCPRRCPGTDCAGSRP-R*AAAGRTPRRGATR---------- 429
P+ +P G T P PG G RP AAG P GAT
Sbjct: 229 TATPAPTATPAPGSTPGAP-PAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGG 287
Query: 428 -----SGR---------GAA*-----WPPPRRARTGTPARP*A---PGSRGCPPPARRTG 315
SGR GAA P P A T P RP A PG +G PPA
Sbjct: 288 TATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPA---- 343
Query: 314 GRRAPPPCRRGRTQAPAALRPAPAAGTARRWHPAAAGCCGRTR*QGTPAPPSAPR----- 150
APAAGT PAA G G PA P+AP
Sbjct: 344 --------------------GAPAAGT-----PAAPPQAG-----GLPARPAAPAGAAAP 373
Query: 149 ---PRCVWAAPPPCRWPPAAAGCWPGGGCRWRARPRTSASRPPPGSGP 15
P A PPP R A P ++A P A PPP P
Sbjct: 374 STVPGSAAATPPPNRAQFAPPTVTPA----FQAAPTVVAPLPPPPRPP 417
Score = 51.6 bits (122), Expect = 2e-05
Identities = 50/158 (31%), Positives = 54/158 (33%)
Frame = -1
Query: 476 PR*AAAGRTPRRGATRSGRGAA*WPPPRRARTGTPARP*APGSRGCPPPARRTGGRRAPP 297
P AA P R A A PP P RP AP PP AR PP
Sbjct: 55 PPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPP 114
Query: 296 PCRRGRTQAPAALRPAPAAGTARRWHPAAAGCCGRTR*QGTPAPPSAPRPRCVWAAPPPC 117
P + P A P A T P AA + P PP+ P APPP
Sbjct: 115 PAAPKQPSPPPAAAPQQHAPTPPPPAPPAA--------RPAPTPPAPPPAAAPQHAPPP- 165
Query: 116 RWPPAAAGCWPGGGCRWRARPRTSASRPPPGSGPHLSP 3
PP A ARP T PPP +GP P
Sbjct: 166 --PPPPA-----------ARP-TPTPPPPPPAGPAARP 189
Score = 49.3 bits (116), Expect = 7e-05
Identities = 66/235 (28%), Positives = 78/235 (33%), Gaps = 10/235 (4%)
Frame = +3
Query: 48 RPWPCPPPTSTAWPAACGSWRPAARWRRCPHAPRPRG----------RRWCRCTLSPGPT 197
RP P PPP A PAA + PA P AP P T +P PT
Sbjct: 172 RPTPTPPPPPPAGPAARPT--PAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPT 229
Query: 198 ATACCSRVPPPSCTCGRSRPKCGRGLCTAPTAGWRSTTAACAPCWGRATTASWRSRTRWC 377
AT + P P T G P GR P S AA +P AT A
Sbjct: 230 ATPAPTATPAPGSTPG--APPAGRPGAPPPGVRPGSPPAAGSPPAPGATPA--------- 278
Query: 378 ACTSAARWRPSSRTPPRASGTAPRSTPCSRSSRPATCAICTWTAPRTPARCCTTPWWTAC 557
T+ A P P + P STP ++ PA A P P
Sbjct: 279 PTTTPA---PGGTATPPSGRPGPASTPAPGAATPAPTA-----TPAPGGALTPPPGRPGA 330
Query: 558 T*RAAPPRTTPSCGAPRLRSRPAAAPLTTPCSRCPSLRSWAASPPSSSRPGATRP 722
P TP GAP PAA P P+ + AA+P + A P
Sbjct: 331 GPTPGPQGGTPPAGAP-AAGTPAAPPQAGGLPARPAAPAGAAAPSTVPGSAAATP 384
Score = 48.9 bits (115), Expect = 1e-04
Identities = 59/179 (32%), Positives = 65/179 (35%), Gaps = 4/179 (2%)
Frame = +1
Query: 19 PEPGGGRDADVRGRARHLHPPPGQQPAA--AGGQRQGGGAAHTHRGLGAEGGAGVPCHLV 192
P PG A GR PPPG +P + A G GA A GG P
Sbjct: 238 PAPGSTPGAPPAGRPGA--PPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATP---- 291
Query: 193 RPQQPAAAGCHRRAVPAAGAGRSAAGACVRPRRQGGGARRPPVRRAGGGQPRLPGAQGRA 372
+P A + PA GA A A P GG PP R G PG QG
Sbjct: 292 PSGRPGPA-----STPAPGAATPAPTATPAP---GGALTPPPGRPGAG---PTPGPQG-- 338
Query: 373 GVPVRARRGGGHQAAPRPERVAPRRGVRPA--AAHRGRLPAQSVPGQRRGHPRAAVPPP 543
G P G AAP P+ G PA AA G +VPG AA PPP
Sbjct: 339 GTPPAGAPAAGTPAAP------PQAGGLPARPAAPAGAAAPSTVPGS-----AAATPPP 386
Score = 44.7 bits (104), Expect = 0.002
Identities = 70/249 (28%), Positives = 84/249 (33%), Gaps = 1/249 (0%)
Frame = +3
Query: 48 RPWPCPPPTSTAWPAACGSWRPAARWRRCPHAPRPRGRRWCRCTLSPGPTATACCSRVPP 227
RP P PPP A P AA + P P P P P A PP
Sbjct: 105 RPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPP 164
Query: 228 PSCTCGRSRPKCGRGLCTAPTAGWRSTTAACAPCWGRATTASWRSRTRWCACTSAARWRP 407
P P R T P A R T A + T +A RP
Sbjct: 165 P------PPPPAARPTPTPPPPPPAGPAA-------RPTPAPTATPTPVAPPPAAPTARP 211
Query: 408 SSRTPPRASGTAPRSTPCSRSSRPATCAICTWTAPRTPARCCTTPWWTACT*RAAPPRTT 587
S P A+ AP TP + ++ PA A TPA T APP
Sbjct: 212 GSPAP--AATPAPTPTP-APTATPAPTA--------TPAPGSTP---------GAPPAGR 251
Query: 588 PSCGAPRLRSRPAAAPLTTPCSRCPSLRSWAASPPSSSRPGAT-RPSSWRRRRRTWWSP* 764
P GAP P P + P + P +P ++ PG T P S R + +P
Sbjct: 252 P--GAP----PPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPG 305
Query: 765 PATWAATAT 791
AT A TAT
Sbjct: 306 AATPAPTAT 314
Score = 43.1 bits (100), Expect = 0.005
Identities = 47/138 (34%), Positives = 51/138 (36%), Gaps = 11/138 (7%)
Frame = -1
Query: 383 TGTPARP*AP--GSRGCPPPARRTGGRRAPPPCRRGRTQAPAALRPAPAAGTARRWHPAA 210
TG +P P G G PPA R A PP PAA P PAA R PAA
Sbjct: 42 TGPDGKPKQPPKGPPGAAPPA--APARPAAPPPAAAPPHPPAA--PPPAAAPPR---PAA 94
Query: 209 AGCCGRTR*QGTPAPPSAPRPRCVWAAPPPC-----RWPPAAA----GCWPGGGCRWRAR 57
P PP A RP PPP PPAAA P AR
Sbjct: 95 PP---------PPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAAR 145
Query: 56 PRTSASRPPPGSGPHLSP 3
P + PPP + P +P
Sbjct: 146 PAPTPPAPPPAAAPQHAP 163
Score = 36.6 bits (83), Expect = 0.50
Identities = 43/137 (31%), Positives = 44/137 (31%), Gaps = 9/137 (6%)
Frame = +1
Query: 166 GAGVPCHLVRPQQP--AAAGCHRRAVP--AAGAGRSAAGACVRPRRQGGGARRPPVRRAG 333
GA P RP P AAA H A P AA R AA P PP R
Sbjct: 57 GAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPP---------PPAARPA 107
Query: 334 GGQPRLPGAQGRAGVPVRARRGGGHQAAPRPE-----RVAPRRGVRPAAAHRGRLPAQSV 498
P P A + P A H P P R AP P AA P
Sbjct: 108 PPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPP 167
Query: 499 PGQRRGHPRAAVPPPGG 549
P R P PPP G
Sbjct: 168 PPAARPTPTPPPPPPAG 184
>ref|ZP_00007740.1| COG0845: Membrane-fusion protein [Rhodobacter sphaeroides]
Length = 775
Score = 69.3 bits (168), Expect = 7e-11
Identities = 79/232 (34%), Positives = 87/232 (37%), Gaps = 19/232 (8%)
Frame = +1
Query: 22 EPGGGRDADVRGRARHLHPPPGQQPAAAGGQRQ--GGGAAHTHRGLGAEGGAGVPCHLVR 195
+PGG R AR P + A R+ G G H H A G P
Sbjct: 104 DPGGELRLSRRRHARARSGEPRHRARAGDRHRRALGLGQDHAHP---AHPGHRDPAGRAD 160
Query: 196 PQQPAAAGCHRRAVPAAGAGRSAAGACVRPRRQGGGAR-RPPVRRAGGGQPRLPGAQGRA 372
P + HR AA G AAG PR R RPP RA GG R GR
Sbjct: 161 PVRRDRHPQHRARPSAAAGGDRAAGQSALPRHAAREYRPRPPRGRARGGGARGRPCGGRR 220
Query: 373 GVPV------RARRGGGHQAAPRPERVAPRRGVRPAAAHRGRLPAQSVPGQRRGHPRAAV 534
P ARRGGG + RP AP G RP AAHR + P RRGH RA
Sbjct: 221 IHPPPAAGLRHARRGGGREPLGRP---APAGGDRPRAAHRS-----AHPDPRRGHERARP 272
Query: 535 PPPGGLRAHDGRHRHARRHRVGLHA----------*GAGPPPRR*RPRAQGA 660
GG + RHR H GL GA P P R A+GA
Sbjct: 273 RVRGGGQPQPRRHRPRPDHDRGLAPALVPRARRPDRGARPGPARGLRPARGA 324
Score = 50.4 bits (119), Expect = 3e-05
Identities = 56/169 (33%), Positives = 62/169 (36%), Gaps = 4/169 (2%)
Frame = +1
Query: 280 RPRRQGGGARRPPVRRAGGGQPRLPGAQGRAGVPVRARRGGGHQAAPRPERVAPRR--GV 453
+P R R +RR G + R G R G A G Q A RP+R A +R G
Sbjct: 15 QPARAADAGERGGLRRGAGARGRDHGGHARGG----ADAGRAGQRAARPDRGARQRMAGG 70
Query: 454 RPAAAHRGRLPAQSVPGQRRGHPRAAVPPPGGLRAHD--GRHRHARRHRVGLHA*GAGPP 627
RP S R PR PP RA D G R +RR HA
Sbjct: 71 RPVDRDAAPDHGSSARTARHRRPR---PPRPHRRARDPGGELRLSRRR----HARARSGE 123
Query: 628 PRR*RPRAQGAHHFGAGLHHPLHHPALELHAQAAGGAGGGPGGRHDQQR 774
PR R RA H GL HPA H AG A RH Q R
Sbjct: 124 PRH-RARAGDRHRRALGLGQDHAHPAHPGHRDPAGRADPVRRDRHPQHR 171
Score = 47.8 bits (112), Expect = 2e-04
Identities = 60/185 (32%), Positives = 70/185 (37%), Gaps = 5/185 (2%)
Frame = +1
Query: 16 GPEPGGGRDADVRGRARHLHPPPGQQPAAAGGQRQGGGAAHTHRGLGAEGGAGVPCHLVR 195
G + G+ A R AR P P + G+ +GGGA G PC R
Sbjct: 179 GGDRAAGQSALPRHAAREYRPRPPR------GRARGGGA------------RGRPCGGRR 220
Query: 196 PQQPAAAGC-HRRAVPAAGAGRSAAGACVRPRRQGGGARRPPVRRAGGGQPRLPGAQGRA 372
P AAG H R G GR G RP GG R R+ PR + R
Sbjct: 221 IHPPPAAGLRHAR----RGGGREPLG---RP-APAGGDRPRAAHRSAHPDPRRGHERARP 272
Query: 373 GVPVRARRGGGHQAAPRPERVAPR----RGVRPAAAHRGRLPAQSVPGQRRGHPRAAVPP 540
V RGGG P+P R PR RG+ PA R R P + G R G R P
Sbjct: 273 RV-----RGGGQ---PQPRRHRPRPDHDRGLAPALVPRARRPDR---GARPGPARGLRPA 321
Query: 541 PGGLR 555
G R
Sbjct: 322 RGAAR 326
Score = 46.2 bits (108), Expect = 6e-04
Identities = 75/253 (29%), Positives = 82/253 (31%), Gaps = 2/253 (0%)
Frame = +1
Query: 55 GRARHLHPPPGQQPAAA-GGQRQGGGAAHTHRGLGAEGGAGVPCHLVRPQQPAAAGCHRR 231
GR H H P A GG R+G GA G A GGA A R
Sbjct: 8 GRHEHAHQPARAADAGERGGLRRGAGARGRDHGGHARGGA-----------DAGRAGQRA 56
Query: 232 AVPAAGAGRSAAGACVRP-RRQGGGARRPPVRRAGGGQPRLPGAQGRAGVPVRARRGGGH 408
A P GA + AG RP R R A +PR P RA P R
Sbjct: 57 ARPDRGARQRMAGG--RPVDRDAAPDHGSSARTARHRRPRPPRPHRRARDPGGELRLSRR 114
Query: 409 QAAPRPERVAPRRGVRPAAAHRGRLPAQSVPGQRRGHPRAAVPPPGGLRAHDGRHRHARR 588
+ A R PR R HR L GQ HP A P G R GR RR
Sbjct: 115 RHA-RARSGEPRHRARAGDRHRRALGL----GQDHAHP--AHP---GHRDPAGRADPVRR 164
Query: 589 HRVGLHA*GAGPPPRR*RPRAQGAHHFGAGLHHPLHHPALELHAQAAGGAGGGPGGRHDQ 768
R P R RP A AG H A E + G G G R
Sbjct: 165 DR---------HPQHRARPSAAAGGDRAAGQSALPRHAAREYRPRPPRGRARGGGARGRP 215
Query: 769 QRGLQLQQRQGAG 807
G ++ AG
Sbjct: 216 CGGRRIHPPPAAG 228
Score = 38.5 bits (88), Expect = 0.13
Identities = 74/241 (30%), Positives = 84/241 (34%), Gaps = 26/241 (10%)
Frame = -1
Query: 647 RGRQRRGGGPAPQAWSPTRWRRAWRCRPSCARSPPGG--GTAARGCPRRCPGTDCAGSRP 474
R + R G P +A + R RRA A G A R P R +RP
Sbjct: 115 RHARARSGEPRHRARAGDRHRRALGLGQDHAHPAHPGHRDPAGRADPVRRDRHPQHRARP 174
Query: 473 R*AAAGRTPRRGATRSGRGAA*WPPPRRARTGTPARP*APGSRGCPPPARRTGGRRAPPP 294
AAAG G +G+ A PR A RP +RG R GGRR PP
Sbjct: 175 S-AAAG-----GDRAAGQSAL----PRHAAREYRPRPPRGRARGGGARGRPCGGRRIHPP 224
Query: 293 -------CRRGRTQAPAALRPAPAAG------------TARRWHPAAAGCCGRTR*QGTP 171
RRG + P RPAPA G RR H A R R G P
Sbjct: 225 PAAGLRHARRGGGREPLG-RPAPAGGDRPRAAHRSAHPDPRRGHERAR---PRVRGGGQP 280
Query: 170 AP-PSAPRP----RCVWAAPPPCRWPPAAAGCWPGGGCRWRARPRTSASRPPPGSGPHLS 6
P PRP A P R P A P G RP A+R P L+
Sbjct: 281 QPRRHRPRPDHDRGLAPALVPRARRPDRGARPGPARG----LRPARGAARGLRDLCPSLA 336
Query: 5 P 3
P
Sbjct: 337 P 337
