Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000081A_C01 KCC000081A_c01
(1784 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00015440.1| COG0247: Fe-S oxidoreductase [Rhodospirillum ... 184 4e-90
ref|ZP_00141210.1| COG0247: Fe-S oxidoreductase [Pseudomonas aer... 196 1e-88
ref|NP_253460.1| probable ferredoxin [Pseudomonas aeruginosa PA0... 195 3e-88
ref|ZP_00086495.1| COG0247: Fe-S oxidoreductase [Pseudomonas flu... 195 8e-88
ref|NP_746845.1| D-lactate dehydrogenase, putative [Pseudomonas ... 192 2e-86
>ref|ZP_00015440.1| COG0247: Fe-S oxidoreductase [Rhodospirillum rubrum]
Length = 1040
Score = 184 bits (466), Expect(2) = 4e-90
Identities = 94/191 (49%), Positives = 129/191 (67%)
Frame = +2
Query: 545 LLRRLQSLSPRSASTRTPVRTFAYGTDASFYRLNPKLVVKVHNEDEVRRIMPIAERLQVP 724
+L L++L P P+R AYGTDASFYRL PK+VV+V +E EV R++ I + + P
Sbjct: 94 VLAALRALLPNERIFTDPLRLLAYGTDASFYRLLPKVVVEVADEAEVARVLAICRQYRAP 153
Query: 725 ITFRAAGTSLSGQAITDSVLIKLSHTGKNFRNFTVHGDGSVITVEPGLIGGEVNRILAAH 904
+TFRAAGTSLSGQA+++SVL+ L G+ + + G+ I ++PG+IG E NR LA
Sbjct: 154 VTFRAAGTSLSGQAVSESVLMVL---GRGWTGAVIEAKGARIRLQPGVIGAEANRKLAGF 210
Query: 905 QKKNKLPIQYKIGPDPSSIDSCMIGGIVSNNSSGMCCGVSQNTYHTLKDMRVVFVDGTVL 1084
+ KIGPDP+SID+C IGGI +NN+SGMCCG S N+Y T++ MR++ DGT++
Sbjct: 211 GR--------KIGPDPASIDTCKIGGIAANNASGMCCGTSDNSYQTVEAMRLILADGTLV 262
Query: 1085 DTADPNSCTAF 1117
DTAD S F
Sbjct: 263 DTADARSIARF 273
Score = 172 bits (436), Expect(2) = 4e-90
Identities = 103/220 (46%), Positives = 134/220 (60%)
Frame = +3
Query: 1125 SHRSLVDGVVSLARRVQADKELTALIRRKFAIKCTTGYSLNALVDFPVDNPIEIIKHLII 1304
+H L+ G+ +L RRV+A+ L A IRRK+AIK TTGYSLNALVD+ D+P++I+ HL+I
Sbjct: 276 THADLLAGLAALGRRVRANAALAARIRRKYAIKNTTGYSLNALVDY--DDPLDILTHLLI 333
Query: 1305 GSEGTLGFVSRATYNTVPEWPNKASAFIVFPDVRAACTGASVLRNETSVDAVELFDRASL 1484
GSEGTLGF++ TY T+ E P KASA ++F D+ AC ++L+ T V AVEL DRA+L
Sbjct: 334 GSEGTLGFIAEITYRTIAEHPAKASALLLFADIAEACRAVTLLK-ATPVSAVELMDRAAL 392
Query: 1485 RECENNEDMMRLVPDIKGCDPMAAALLIECRGQDEAALQSRIEEVVRVLTAAGLPFGAKA 1664
R E+ M I+G P AALL+E R D ALQ+ IEE+ + L A F
Sbjct: 393 RSVEDKPGM---PAQIRGLAPGVAALLVETRAADSLALQANIEEIGQTLGAVTPLF---- 445
Query: 1665 AQPMAIDAYPFHHDQKNAKVFWDVRRGLIPIVGAAREPGT 1784
P A F D W +R+GL P VGA R GT
Sbjct: 446 --PPA-----FSSDPAVYGTLWKIRKGLFPAVGAVRATGT 478
>ref|ZP_00141210.1| COG0247: Fe-S oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 938
Score = 196 bits (499), Expect(2) = 1e-88
Identities = 103/197 (52%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
Frame = +2
Query: 530 VAMPL-LLRRLQSLSPRSASTRTPVRTFAYGTDASFYRLNPKLVVKVHNEDEVRRIMPIA 706
+++P+ L ++ L PR P+ T A+GTDASFYRL PKLV++V +EDEV I+ +A
Sbjct: 1 MSLPIPFLETVERLIPRERRFDDPLSTLAFGTDASFYRLIPKLVLRVESEDEVAAILSVA 60
Query: 707 ERLQVPITFRAAGTSLSGQAITDSVLIKLSHTGKNFRNFTVHGDGSVITVEPGLIGGEVN 886
R QVP+TFRAAGTSLSGQAI+DSVL+ L G N+ + DG+ I ++PG+IG + N
Sbjct: 61 YREQVPVTFRAAGTSLSGQAISDSVLLVL---GDNWNGREIRADGAQIRLQPGVIGAQAN 117
Query: 887 RILAAHQKKNKLPIQYKIGPDPSSIDSCMIGGIVSNNSSGMCCGVSQNTYHTLKDMRVVF 1066
LA P KIGPDP+SI++C IGGIV+NN+SGMCCG +QN+YHTL +R++
Sbjct: 118 AWLA--------PFGRKIGPDPASINACKIGGIVANNASGMCCGTAQNSYHTLAGLRLLL 169
Query: 1067 VDGTVLDTADPNSCTAF 1117
DGT LD+ DP S AF
Sbjct: 170 ADGTRLDSEDPASVAAF 186
Score = 154 bits (390), Expect(2) = 1e-88
Identities = 93/220 (42%), Positives = 121/220 (54%)
Frame = +3
Query: 1125 SHRSLVDGVVSLARRVQADKELTALIRRKFAIKCTTGYSLNALVDFPVDNPIEIIKHLII 1304
SH L++ + L R +A+ EL A IR K+ +K TTG SLNALVD+ D P++I+ HL++
Sbjct: 189 SHGELLERLAELGRETRANAELAAKIRHKYRLKNTTGLSLNALVDY--DEPLDILTHLMV 246
Query: 1305 GSEGTLGFVSRATYNTVPEWPNKASAFIVFPDVRAACTGASVLRNETSVDAVELFDRASL 1484
GSEGTLGF+S TY+TVPE P+KASA +VFP V CT +VL+ + V AVEL DR SL
Sbjct: 247 GSEGTLGFISAVTYDTVPEHPHKASALLVFPTVETCCTAVAVLKRQ-PVSAVELLDRRSL 305
Query: 1485 RECENNEDMMRLVPDIKGCDPMAAALLIECRGQDEAALQSRIEEVVRVLTAAGLPFGAKA 1664
R EN + M V K A ALLIE R L ++ ++ A
Sbjct: 306 RSVENMQGMPEWV---KSLSAGACALLIESRAASRTLLHEQLGRIM-----------ASI 351
Query: 1665 AQPMAIDAYPFHHDQKNAKVFWDVRRGLIPIVGAAREPGT 1784
A+ F D W +R+ P VGA RE GT
Sbjct: 352 AEYPLEKQVDFSEDPAVYNQLWRIRKDTFPAVGAVRETGT 391
>ref|NP_253460.1| probable ferredoxin [Pseudomonas aeruginosa PA01]
gi|11351293|pir||H83050 probable ferredoxin PA4772
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9951036|gb|AAG08158.1|AE004890_11 probable ferredoxin
[Pseudomonas aeruginosa PAO1]
Length = 938
Score = 195 bits (495), Expect(2) = 3e-88
Identities = 103/197 (52%), Positives = 136/197 (68%), Gaps = 1/197 (0%)
Frame = +2
Query: 530 VAMPL-LLRRLQSLSPRSASTRTPVRTFAYGTDASFYRLNPKLVVKVHNEDEVRRIMPIA 706
+++P+ L ++ L PR P+ T A+GTDASFYRL PKLV++V +EDEV I+ A
Sbjct: 1 MSLPIPFLETVERLIPRERRFDDPLSTLAFGTDASFYRLIPKLVLRVESEDEVAAILSAA 60
Query: 707 ERLQVPITFRAAGTSLSGQAITDSVLIKLSHTGKNFRNFTVHGDGSVITVEPGLIGGEVN 886
R QVP+TFRAAGTSLSGQAI+DSVL+ L G N+ + DG+ I ++PG+IG + N
Sbjct: 61 YREQVPVTFRAAGTSLSGQAISDSVLLVL---GDNWNGREIRADGAQIRLQPGVIGAQAN 117
Query: 887 RILAAHQKKNKLPIQYKIGPDPSSIDSCMIGGIVSNNSSGMCCGVSQNTYHTLKDMRVVF 1066
LA P KIGPDP+SI++C IGGIV+NN+SGMCCG +QN+YHTL +R++
Sbjct: 118 AWLA--------PFGRKIGPDPASINACKIGGIVANNASGMCCGTAQNSYHTLAGLRLLL 169
Query: 1067 VDGTVLDTADPNSCTAF 1117
DGT LD+ DP S AF
Sbjct: 170 ADGTRLDSEDPASVAAF 186
Score = 154 bits (390), Expect(2) = 3e-88
Identities = 93/220 (42%), Positives = 121/220 (54%)
Frame = +3
Query: 1125 SHRSLVDGVVSLARRVQADKELTALIRRKFAIKCTTGYSLNALVDFPVDNPIEIIKHLII 1304
SH L++ + L R +A+ EL A IR K+ +K TTG SLNALVD+ D P++I+ HL++
Sbjct: 189 SHGELLERLAELGRETRANAELAAKIRHKYRLKNTTGLSLNALVDY--DEPLDILTHLMV 246
Query: 1305 GSEGTLGFVSRATYNTVPEWPNKASAFIVFPDVRAACTGASVLRNETSVDAVELFDRASL 1484
GSEGTLGF+S TY+TVPE P+KASA +VFP V CT +VL+ + V AVEL DR SL
Sbjct: 247 GSEGTLGFISAVTYDTVPEHPHKASALLVFPTVETCCTAVAVLKRQ-PVSAVELLDRRSL 305
Query: 1485 RECENNEDMMRLVPDIKGCDPMAAALLIECRGQDEAALQSRIEEVVRVLTAAGLPFGAKA 1664
R EN + M V K A ALLIE R L ++ ++ A
Sbjct: 306 RSVENMQGMPEWV---KSLSAGACALLIESRAASRTLLHEQLGRIM-----------ASI 351
Query: 1665 AQPMAIDAYPFHHDQKNAKVFWDVRRGLIPIVGAAREPGT 1784
A+ F D W +R+ P VGA RE GT
Sbjct: 352 AEYPLEKQVDFSEDPAVYNQLWRIRKDTFPAVGAVRETGT 391
>ref|ZP_00086495.1| COG0247: Fe-S oxidoreductase [Pseudomonas fluorescens PfO-1]
Length = 1049
Score = 195 bits (496), Expect(2) = 8e-88
Identities = 104/190 (54%), Positives = 131/190 (68%)
Frame = +2
Query: 548 LRRLQSLSPRSASTRTPVRTFAYGTDASFYRLNPKLVVKVHNEDEVRRIMPIAERLQVPI 727
LR Q L P P+ T A+GTDASFYRL P+LV++V +EDEV ++ +A+R QVP+
Sbjct: 117 LRDAQQLIPAERRFDDPLSTLAFGTDASFYRLIPQLVIRVESEDEVVALLKLAQRDQVPV 176
Query: 728 TFRAAGTSLSGQAITDSVLIKLSHTGKNFRNFTVHGDGSVITVEPGLIGGEVNRILAAHQ 907
TFRAAGTSLSGQAI+DSVLI L G N+ + G G+ I ++PG+IG + N LA
Sbjct: 177 TFRAAGTSLSGQAISDSVLIVL---GDNWNAREIRGQGTQIRLQPGVIGAQANAWLA--- 230
Query: 908 KKNKLPIQYKIGPDPSSIDSCMIGGIVSNNSSGMCCGVSQNTYHTLKDMRVVFVDGTVLD 1087
P KIGPDP+SI++C IGGIV+NN+SGMCCG +QNTYHTL +R+V DGT LD
Sbjct: 231 -----PFGRKIGPDPASINACKIGGIVANNASGMCCGTAQNTYHTLAGIRLVLADGTRLD 285
Query: 1088 TADPNSCTAF 1117
T D S AF
Sbjct: 286 TEDAASVAAF 295
Score = 153 bits (386), Expect(2) = 8e-88
Identities = 90/220 (40%), Positives = 124/220 (55%)
Frame = +3
Query: 1125 SHRSLVDGVVSLARRVQADKELTALIRRKFAIKCTTGYSLNALVDFPVDNPIEIIKHLII 1304
SH L++ + +L R +A+ +L A IR K+ +K TTG SLNALVDF D P++I+ HL++
Sbjct: 298 SHGDLLERLATLGRETRANAKLAARIRHKYRLKNTTGLSLNALVDF--DEPVDILSHLLV 355
Query: 1305 GSEGTLGFVSRATYNTVPEWPNKASAFIVFPDVRAACTGASVLRNETSVDAVELFDRASL 1484
GSEGTLGF+S TY+TV + PNKASA IVFPDV C +VL+++ V AVEL DR SL
Sbjct: 356 GSEGTLGFISAVTYDTVIDHPNKASALIVFPDVETCCNAVTVLKSQ-PVSAVELLDRRSL 414
Query: 1485 RECENNEDMMRLVPDIKGCDPMAAALLIECRGQDEAALQSRIEEVVRVLTAAGLPFGAKA 1664
R ++ M V + A ALLIE R LQ ++ +++ L+A +
Sbjct: 415 RSVQDKPGMPAFVQQLSN---NACALLIESRAASSTLLQEQLAQIMASLSAFPVE----- 466
Query: 1665 AQPMAIDAYPFHHDQKNAKVFWDVRRGLIPIVGAAREPGT 1784
F D W +R+ P VGA R+ GT
Sbjct: 467 ------KQVDFTEDPVENARLWAIRKDTFPAVGAVRKTGT 500
>ref|NP_746845.1| D-lactate dehydrogenase, putative [Pseudomonas putida KT2440]
gi|24986491|gb|AAN70309.1|AE016671_10 D-lactate
dehydrogenase, putative [Pseudomonas putida KT2440]
Length = 936
Score = 192 bits (489), Expect(2) = 2e-86
Identities = 103/190 (54%), Positives = 129/190 (67%)
Frame = +2
Query: 548 LRRLQSLSPRSASTRTPVRTFAYGTDASFYRLNPKLVVKVHNEDEVRRIMPIAERLQVPI 727
LR + L P P T A+GTDASFYRL PKLVV+V +EDEV ++ +A+R +VP+
Sbjct: 8 LRDAERLIPAERRFDDPTSTLAFGTDASFYRLIPKLVVRVESEDEVVGLIKLAQRERVPV 67
Query: 728 TFRAAGTSLSGQAITDSVLIKLSHTGKNFRNFTVHGDGSVITVEPGLIGGEVNRILAAHQ 907
TFRAAGTSLSGQAI+DSVLI L G N+ + G I ++PG+IG + N LA
Sbjct: 68 TFRAAGTSLSGQAISDSVLIVL---GDNWNGREIRRQGEQIRLQPGVIGAQANAWLA--- 121
Query: 908 KKNKLPIQYKIGPDPSSIDSCMIGGIVSNNSSGMCCGVSQNTYHTLKDMRVVFVDGTVLD 1087
P KIGPDP+SI++C IGGIV+NN+SGMCCG +QNTYHTL +R+V DGT LD
Sbjct: 122 -----PFGRKIGPDPASINACKIGGIVANNASGMCCGTAQNTYHTLAGLRLVLADGTRLD 176
Query: 1088 TADPNSCTAF 1117
+ DP S AF
Sbjct: 177 SEDPASVAAF 186
Score = 151 bits (381), Expect(2) = 2e-86
Identities = 88/221 (39%), Positives = 125/221 (55%)
Frame = +3
Query: 1122 TSHRSLVDGVVSLARRVQADKELTALIRRKFAIKCTTGYSLNALVDFPVDNPIEIIKHLI 1301
+SH L++ + L R +A+ L IR K+ +K TTG SLNALVD+ D P++I++HL+
Sbjct: 188 SSHAELLEALARLGRETRANTALAERIRHKYRLKNTTGLSLNALVDY--DQPLDILQHLL 245
Query: 1302 IGSEGTLGFVSRATYNTVPEWPNKASAFIVFPDVRAACTGASVLRNETSVDAVELFDRAS 1481
+GSEGTLGF+S TY+TVP+ P+KASA +VFP V + C VL+ + V AVEL DR S
Sbjct: 246 VGSEGTLGFISAVTYDTVPDHPHKASALLVFPSVESCCRAVPVLKQQ-PVSAVELLDRRS 304
Query: 1482 LRECENNEDMMRLVPDIKGCDPMAAALLIECRGQDEAALQSRIEEVVRVLTAAGLPFGAK 1661
LR +N M V KG A ALLIE R ++ L +++++ + + A P +
Sbjct: 305 LRSVQNMPGMPLWV---KGLSDNACALLIESRAASQSLLHEQLQQI--MASIADFPLEQQ 359
Query: 1662 AAQPMAIDAYPFHHDQKNAKVFWDVRRGLIPIVGAAREPGT 1784
F D W +R+ P VGA R+ GT
Sbjct: 360 V---------DFSEDPAVYNQLWKIRKDTFPAVGAVRQTGT 391
