KCC000080A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000080A_C01 KCC000080A_c01
CTGAATCCGAGGAGACCTTTAGGACGTGTCTCAGGCATTGACGTTCGCCTGTCAAGGCAC
AAGCACCAAAGCGCACTTGCATAGTGAACCCTTGTGACACCGACTGGCAGTATGCAGACC
CAGTTGCGTGCCCCTTGCGTGTCTCACAAGACGCGTATCAACGGTGTGCCTTGCTCGCCC
AAGGTCGTGCCCCGCGTCGCCCGAGTACCGTCAGGCTCTGCCCCCGAGGCCCCCGTCGCC
TCGCCCGAGCCGACCGCTGCTCAGCGCAACGTTGTCGCTCAGGTCGCTAAAATGATCCAC
GCGCAGACGACCACCAACAAGAAGGGCGCCCTGGTTAGCGAGCTGCCCGCATGGCAGGCG
CTGAAGGAGCATGTTAACGAGATTGAGAAGACGCACCTACGCGACCTCCTCCACGATGAG
GCTCGCTGCATGTCGCTCATCAAGGAGTGCGAGGGCATCTACGGCGACTTCACCCGCCAG
CGCGTGACCCAGAAGACCCTGGAGCTGCTGTTTGAGCTGGCTGAGCAGAGCAACCTGCGC
GGCAAGATCAACGCCATGTTCAACGGCGAGCACATCAACAGTACCGAGGACCGCGCCGTG
CTGCACATCGCCACCCGCGCCCATCGCAACCAGAAGATCTTTGTGGACGGCAAGGACGTG
GTGCCGGACGTGTGGGAGGTGCTCGACAAGATCAAGGCCTTCTCCGACAAGGTCCGCAAC
GGCGAGTGGCTGGGCGTCACCGGCAAGCCGCTGAAGAACGTGGTGGCCATCGGCATTGGC
GGCTCGTTCCTGGGCCCCCTGTTCGTGCACACCGCGCTCAGGACCGAGCCGGTGGCCATG
CGCTGCAGCCGCGACCGCAGCCTGCGCTTCCTGGCCAACGTGGACCCCATTGATGTGGCC
CGCGCGCTGGACGGCCTGGACCCCGAGGAGACGCTGGTGGTGGTGGTGTCCAAGACCTTC
ACCACCGCGGAGACCATGCTCAACGCGCGCACTGTGCGCAGCTGGCTCACCTCCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000080A_C01 KCC000080A_c01
         (1016 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T09154 glucose-6-phosphate isomerase (EC 5.3.1.9), cytosol ...   309  4e-83
sp|O82059|G6PI_SPIOL Glucose-6-phosphate isomerase, cytosolic (G...   309  4e-83
dbj|BAC11913.1| cytosolic phosphoglucose isomerase [Arabis glabra]    307  2e-82
dbj|BAB17636.1| cytosolic phosphoglucose isomerase [Arabidopsis ...   304  2e-81
dbj|BAB17645.1| cytosolic phosphoglucose isomerase [Arabidopsis ...   304  2e-81

>pir||T09154 glucose-6-phosphate isomerase (EC 5.3.1.9), cytosol - spinach
            gi|3413513|emb|CAA03983.1| glucose-6-phosphate isomerase
            [Spinacia oleracea]
          Length = 566

 Score =  309 bits (792), Expect = 4e-83
 Identities = 150/228 (65%), Positives = 186/228 (80%)
 Frame = +1

Query: 331  LVSELPAWQALKEHVNEIEKTHLRDLLHDEARCMSLIKECEGIYGDFTRQRVTQKTLELL 510
            L+ +  +WQ LK HV EI+KTHLRDL+ D  RC S++ E +G+  D++RQ  T  T+  L
Sbjct: 6    LICDTDSWQNLKTHVAEIKKTHLRDLMSDADRCKSMMVEFDGLLLDYSRQNATHDTMSKL 65

Query: 511  FELAEQSNLRGKINAMFNGEHINSTEDRAVLHIATRAHRNQKIFVDGKDVVPDVWEVLDK 690
            F+LAE S+L+ KIN MFNGEHINSTE+R+VLH+A RA R+  I  DGK+VVPDVW+VLDK
Sbjct: 66   FQLAEASHLKDKINQMFNGEHINSTENRSVLHVALRASRDAVINGDGKNVVPDVWQVLDK 125

Query: 691  IKAFSDKVRNGEWLGVTGKPLKNVVAIGIGGSFLGPLFVHTALRTEPVAMRCSRDRSLRF 870
            I+ FS+K+R+G W+GVTGKPL NVVA+GIGGSFLGPLFVHTAL+TE  A  C++ R LRF
Sbjct: 126  IRDFSEKIRSGSWVGVTGKPLTNVVAVGIGGSFLGPLFVHTALQTESEAAECAKGRQLRF 185

Query: 871  LANVDPIDVARALDGLDPEETLVVVVSKTFTTAETMLNARTVRSWLTS 1014
            LANVDPIDVA+ + GL+PE TLVVVVSKTFTTAETMLNART+R W++S
Sbjct: 186  LANVDPIDVAKNISGLNPETTLVVVVSKTFTTAETMLNARTLREWISS 233

>sp|O82059|G6PI_SPIOL Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose
            isomerase) (PGI) (Phosphohexose isomerase) (PHI)
          Length = 565

 Score =  309 bits (792), Expect = 4e-83
 Identities = 150/228 (65%), Positives = 186/228 (80%)
 Frame = +1

Query: 331  LVSELPAWQALKEHVNEIEKTHLRDLLHDEARCMSLIKECEGIYGDFTRQRVTQKTLELL 510
            L+ +  +WQ LK HV EI+KTHLRDL+ D  RC S++ E +G+  D++RQ  T  T+  L
Sbjct: 5    LICDTDSWQNLKTHVAEIKKTHLRDLMSDADRCKSMMVEFDGLLLDYSRQNATHDTMSKL 64

Query: 511  FELAEQSNLRGKINAMFNGEHINSTEDRAVLHIATRAHRNQKIFVDGKDVVPDVWEVLDK 690
            F+LAE S+L+ KIN MFNGEHINSTE+R+VLH+A RA R+  I  DGK+VVPDVW+VLDK
Sbjct: 65   FQLAEASHLKDKINQMFNGEHINSTENRSVLHVALRASRDAVINGDGKNVVPDVWQVLDK 124

Query: 691  IKAFSDKVRNGEWLGVTGKPLKNVVAIGIGGSFLGPLFVHTALRTEPVAMRCSRDRSLRF 870
            I+ FS+K+R+G W+GVTGKPL NVVA+GIGGSFLGPLFVHTAL+TE  A  C++ R LRF
Sbjct: 125  IRDFSEKIRSGSWVGVTGKPLTNVVAVGIGGSFLGPLFVHTALQTESEAAECAKGRQLRF 184

Query: 871  LANVDPIDVARALDGLDPEETLVVVVSKTFTTAETMLNARTVRSWLTS 1014
            LANVDPIDVA+ + GL+PE TLVVVVSKTFTTAETMLNART+R W++S
Sbjct: 185  LANVDPIDVAKNISGLNPETTLVVVVSKTFTTAETMLNARTLREWISS 232

>dbj|BAC11913.1| cytosolic phosphoglucose isomerase [Arabis glabra]
          Length = 560

 Score =  307 bits (786), Expect = 2e-82
 Identities = 146/229 (63%), Positives = 188/229 (81%)
 Frame = +1

Query: 328  ALVSELPAWQALKEHVNEIEKTHLRDLLHDEARCMSLIKECEGIYGDFTRQRVTQKTLEL 507
            AL+ +  AW+ LK HV +I+KTHLRDL+ D  RC S+I E +G+  D++RQR T +T++ 
Sbjct: 6    ALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMIMEFDGLLLDYSRQRATVETMDK 65

Query: 508  LFELAEQSNLRGKINAMFNGEHINSTEDRAVLHIATRAHRNQKIFVDGKDVVPDVWEVLD 687
            L  LA+ + L  KI+ MFNGEHINSTE+R+VLH+A RA ++  I  DGK+VVP+VW VLD
Sbjct: 66   LLNLAKAAQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGKNVVPEVWNVLD 125

Query: 688  KIKAFSDKVRNGEWLGVTGKPLKNVVAIGIGGSFLGPLFVHTALRTEPVAMRCSRDRSLR 867
            KIK FS+K+R+G W+G TGKPLK+VVAIGIGGSFLGPLFVHTAL+T+P A+ C++ R LR
Sbjct: 126  KIKEFSEKIRSGSWVGATGKPLKDVVAIGIGGSFLGPLFVHTALQTDPEALECAKGRQLR 185

Query: 868  FLANVDPIDVARALDGLDPEETLVVVVSKTFTTAETMLNARTVRSWLTS 1014
            FLAN+DP+DVAR ++GL+PE TLVVVVSKTFTTAETMLNART+R W+T+
Sbjct: 186  FLANIDPVDVARNINGLNPETTLVVVVSKTFTTAETMLNARTLREWITT 234

>dbj|BAB17636.1| cytosolic phosphoglucose isomerase [Arabidopsis thaliana]
          Length = 560

 Score =  304 bits (778), Expect = 2e-81
 Identities = 145/229 (63%), Positives = 186/229 (80%)
 Frame = +1

Query: 328  ALVSELPAWQALKEHVNEIEKTHLRDLLHDEARCMSLIKECEGIYGDFTRQRVTQKTLEL 507
            AL+ +  AW+ LK HV +I+KTHLRDL+ D  RC S++ E +G+  D++RQR T +T++ 
Sbjct: 6    ALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVETMDK 65

Query: 508  LFELAEQSNLRGKINAMFNGEHINSTEDRAVLHIATRAHRNQKIFVDGKDVVPDVWEVLD 687
            L  LA+ + L  KI+ MFNGEHINSTE+RAVLH+A RA ++  I  DGK+VVP+VW VLD
Sbjct: 66   LLNLAKAAQLTEKISRMFNGEHINSTENRAVLHVALRAPKDAVIKADGKNVVPEVWNVLD 125

Query: 688  KIKAFSDKVRNGEWLGVTGKPLKNVVAIGIGGSFLGPLFVHTALRTEPVAMRCSRDRSLR 867
            KIK FSDK+R+G W+G TGKPLK+V+AIGIGGSFLGPLFVHTAL+T+P A+  ++ R LR
Sbjct: 126  KIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLR 185

Query: 868  FLANVDPIDVARALDGLDPEETLVVVVSKTFTTAETMLNARTVRSWLTS 1014
            FLAN+DP+DVAR + GL+PE TLVVVVSKTFTTAETMLNART+R W+T+
Sbjct: 186  FLANIDPVDVARNISGLNPETTLVVVVSKTFTTAETMLNARTLREWITA 234

>dbj|BAB17645.1| cytosolic phosphoglucose isomerase [Arabidopsis thaliana]
          Length = 560

 Score =  304 bits (778), Expect = 2e-81
 Identities = 145/229 (63%), Positives = 186/229 (80%)
 Frame = +1

Query: 328  ALVSELPAWQALKEHVNEIEKTHLRDLLHDEARCMSLIKECEGIYGDFTRQRVTQKTLEL 507
            AL+ +  AW+ LK HV +I+KTHLRDL+ D  RC S++ E +G+  D++RQR T +T++ 
Sbjct: 6    ALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVETMDK 65

Query: 508  LFELAEQSNLRGKINAMFNGEHINSTEDRAVLHIATRAHRNQKIFVDGKDVVPDVWEVLD 687
            L  LA+ + L  KI+ MFNGEHINSTE+RAVLH+A RA ++  I  DGK+VVP+VW VLD
Sbjct: 66   LLNLAKAAQLTEKISRMFNGEHINSTENRAVLHVALRAPKDAVIKADGKNVVPEVWNVLD 125

Query: 688  KIKAFSDKVRNGEWLGVTGKPLKNVVAIGIGGSFLGPLFVHTALRTEPVAMRCSRDRSLR 867
            KIK FSDK+R+G W+G TGKPLK+V+AIGIGGSFLGPLFVHTAL+T+P A+  ++ R LR
Sbjct: 126  KIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLR 185

Query: 868  FLANVDPIDVARALDGLDPEETLVVVVSKTFTTAETMLNARTVRSWLTS 1014
            FLAN+DP+DVAR + GL+PE TLVVVVSKTFTTAETMLNART+R W+T+
Sbjct: 186  FLANIDPVDVARNISGLNPETTLVVVVSKTFTTAETMLNARTLREWITA 234



EST assemble image


clone accession position
1 HCL073a02_r AV643624 1 612
2 MXL096b05_r BP098602 94 454
3 HCL030c04_r AV641235 94 545
4 HCL051e10_r AV642426 94 662
5 MXL060d09_r BP096541 98 418
6 MXL072f07_r BP097260 98 473
7 HCL081e07_r AV644084 100 573
8 MXL046h12_r BP095758 100 375
9 HCL031e12_r AV641321 100 536
10 HCL068a08_r AV643346 100 521
11 MXL083b11_r BP097901 100 540
12 LCL050f01_r AV629028 102 299
13 MXL022g04_r BP094414 105 563
14 CL68b08_r AV396946 112 594
15 HCL077h11_r AV643894 116 566
16 CL15b08_r AV393947 117 589
17 LCL031c12_r AV627738 118 403
18 HCL026e02_r AV641029 119 543
19 CL48a12_r AV395818 123 666
20 CL74d12_r AV396499 361 893
21 MXL019h02_r BP094229 398 907
22 HCL098c08_r AV645106 557 1005
23 CL39h10_r AV395200 609 1110




Chlamydomonas reinhardtii
Kazusa DNA Research Institute