KCC000068A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000068A_C01 KCC000068A_c01
GTTCCACACTGGGCGTCTGATTGCGAACAGTCGAGACTACTCTAACCTGTCCTTTCGCTG
TTTCGGCTGGCTTGCATTTGCGTTGCTGTGTCCCGGCGTGCCCGGGCGTAGCCTGACAAC
CTGGCGCGCCAGGCGCTCGAGGCGCTCAAGAAACTCGACGCCCAATTAGCGGCCGAGAGC
TCTGGTAGCGACTGGGAGGGGGACATGGGAGCCGATAACTCGAAATACGCCGATGGCGAG
GGCGGACAGGTGGCTTATATCGCCCAGCGGACCCAGGTTGGGCGTGCAAAGGCCATTACA
GCCAATAAGGTGCTGGGCGGTGCCACCAAGCTCGATATCAAGTTGCCACCGAAAGCTTCC
CGCGCTGACGCCACGGACTATGAGTTCATCAAGAGCTCGCTGGTGAACCTGCTGCTGTTC
AGCCGGCTGGACCGTATCACCGCGAACCGCATTGTGGCGGAAATGTATGCCCTGCCGGTG
CAAGCGGGCGAAATCCTCATTCAGCAGGGTGACTCGGGCGATGCAGCAACCAAGCTTTTT
GTTGTGCGGAGTGGCAAGTTCGAGGTGCTGGAGCGCCGGAAGGATGTGATGTTTAAGGTC
AACACCAAGGAGCGCGGTGACGTGTTCGGCGAGATCAGTCTGATGTACGACTGCCCACGC
TCCGCCACCGTGGCGGCCACAACGGACGCCAGCGTCTGGGTGCTGGAGCGCGACGTCTTC
CGGCATTTTGTGCAGGCGTCCGTGGAAGACGAGAAGGGTCAAATCCAGCTCTTCCTGAAC
AGCGTGCCGCTGCTGTCCTCGCTGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000068A_C01 KCC000068A_c01
         (806 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB18105.1| cyclic nucreotide dependent protein kinase II [C...   184  2e-45
dbj|BAB18104.1| cyclic nucleotide dependent protein kinase [Chla...   140  3e-32
ref|NP_523671.1| cAMP-dependent protein kinase R2 CG15862-PA [Dr...    99  8e-20
sp|P31320|KAPR_BLAEM cAMP-dependent protein kinase regulatory ch...    94  3e-18
gb|AAA33015.1| cAMP-dependent protein kinase regulatory subunit        94  3e-18

>dbj|BAB18105.1| cyclic nucreotide dependent protein kinase II [Chlamydomonas
           reinhardtii]
          Length = 718

 Score =  184 bits (466), Expect = 2e-45
 Identities = 99/175 (56%), Positives = 127/175 (72%)
 Frame = +1

Query: 280 GRAKAITANKVLGGATKLDIKLPPKASRADATDYEFIKSSLVNLLLFSRLDRITANRIVA 459
           GRAKAIT   V G AT    KLP  A ++   DY FI+++L  LLLF +LD     +IV+
Sbjct: 14  GRAKAITGGAVKGKATLP--KLPTNAVKSQPEDYAFIENALGRLLLFGKLDSQVQRKIVS 71

Query: 460 EMYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVLERRKDVMFKVNTKERGDVFGEIS 639
           EMY   V AG+ILI++GD+G AA +L+VV+SGKFEVL++R+    +VN KERGD FGEIS
Sbjct: 72  EMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIKERGDCFGEIS 131

Query: 640 LMYDCPRSATVAATTDASVWVLERDVFRHFVQASVEDEKGQIQLFLNSVPLLSSL 804
           LMYD PR+ATVAAT DA VW L+R VFR FV+   E +  Q++LFLNSVP+L++L
Sbjct: 132 LMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQETQVSQVELFLNSVPILANL 186

 Score = 50.1 bits (118), Expect = 4e-05
 Identities = 38/117 (32%), Positives = 57/117 (48%)
 Frame = +1

Query: 382 EFIKSSLVNLLLFSRLDRITANRIVAEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKF 561
           E   +S+  L   SR +RI   R+V        QAG+ +I +GD GD     ++V+ G+ 
Sbjct: 174 ELFLNSVPILANLSREERI---RLVDAFEENTYQAGQKVIVEGDKGDL---FYIVKEGEA 227

Query: 562 EVLERRKDVMFKVNTKERGDVFGEISLMYDCPRSATVAATTDASVWVLERDVFRHFV 732
            V +       KVN   + D F E +L+ D PR ATV A T      L+R+ F+  +
Sbjct: 228 IVYQNTPGGQRKVNHLFKADFFSERALLKDEPRMATVEAYTKLVCLTLKRETFQEIL 284

>dbj|BAB18104.1| cyclic nucleotide dependent protein kinase [Chlamydomonas
           reinhardtii]
          Length = 646

 Score =  140 bits (352), Expect = 3e-32
 Identities = 70/114 (61%), Positives = 90/114 (78%)
 Frame = +1

Query: 463 MYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVLERRKDVMFKVNTKERGDVFGEISL 642
           MY   V AG+ILI++GD+G AA +L+VV+SGKFEVL++R+    +VN KERGD FGEISL
Sbjct: 1   MYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIKERGDCFGEISL 60

Query: 643 MYDCPRSATVAATTDASVWVLERDVFRHFVQASVEDEKGQIQLFLNSVPLLSSL 804
           MYD PR+ATVAAT DA VW L+R VFR FV+   E +  Q++LFLNSVP+L++L
Sbjct: 61  MYDSPRTATVAATMDAVVWALDRQVFRFFVRELQETQVSQVELFLNSVPILANL 114

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 39/117 (33%), Positives = 58/117 (49%)
 Frame = +1

Query: 382 EFIKSSLVNLLLFSRLDRITANRIVAEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKF 561
           E   +S+  L   SR +RI   R+V        QAG+ +I +GD GD     ++V+ G+ 
Sbjct: 102 ELFLNSVPILANLSREERI---RLVDAFEENTYQAGQKVIVEGDKGDL---FYIVKEGEA 155

Query: 562 EVLERRKDVMFKVNTKERGDVFGEISLMYDCPRSATVAATTDASVWVLERDVFRHFV 732
            V +       KVN   + D FGE +L+ D PR ATV A T      L+R+ F+  +
Sbjct: 156 IVYQNTPGGQRKVNHLFKADFFGERALLKDEPRMATVEAYTKLVCLTLKRETFQEIL 212

>ref|NP_523671.1| cAMP-dependent protein kinase R2 CG15862-PA [Drosophila
           melanogaster] gi|28573930|ref|NP_724860.2|
           cAMP-dependent protein kinase R2 CG15862-PB [Drosophila
           melanogaster] gi|28573932|ref|NP_788297.1|
           cAMP-dependent protein kinase R2 CG15862-PC [Drosophila
           melanogaster] gi|9295510|gb|AAF86976.1|AF274008_1
           cAMP-dependent protein kinase type II regulatory subunit
           [Drosophila melanogaster] gi|10727675|gb|AAF58862.2|
           CG15862-PA [Drosophila melanogaster]
           gi|17862674|gb|AAL39814.1| LD44591p [Drosophila
           melanogaster] gi|28380995|gb|AAM71046.3| CG15862-PB
           [Drosophila melanogaster] gi|28380996|gb|AAO41465.1|
           CG15862-PC [Drosophila melanogaster]
          Length = 377

 Score = 99.0 bits (245), Expect = 8e-20
 Identities = 68/231 (29%), Positives = 116/231 (49%)
 Frame = +1

Query: 112 PDNLARQALEALKKLDAQLAAESSGSDWEGDMGADNSKYADGEGGQVAYIAQRTQVGRAK 291
           P ++   A+E   KL ++  + S       D  + NS+ AD E   +A   +++    A 
Sbjct: 31  PPDVIDYAVEYFTKLQSERPSVSHTDQSTDDQLSVNSQDADAEPPVMASSRRKSVFAEAY 90

Query: 292 AITANKVLGGATKLDIKLPPKASRADATDYEFIKSSLVNLLLFSRLDRITANRIVAEMYA 471
              A+    GAT +  K   + +R        +  S+ N+LLF  L++   N+++  M+ 
Sbjct: 91  DPEADDDDDGATAVFPKTDEQRAR--------LVESVKNVLLFRSLEKEQMNQVLDAMFE 142

Query: 472 LPVQAGEILIQQGDSGDAATKLFVVRSGKFEVLERRKDVMFKVNTKERGDVFGEISLMYD 651
             VQ G+ +I+QGD GD     +V+ SG ++V    K +    NT     +FGE++L+Y+
Sbjct: 143 RKVQPGDFIIRQGDDGD---NFYVIESGVYKVYINDKHI----NTYNHTGLFGELALLYN 195

Query: 652 CPRSATVAATTDASVWVLERDVFRHFVQASVEDEKGQIQLFLNSVPLLSSL 804
            PR+ATV A T   +W ++R  FR  +  S   ++   +  LNSVP+L +L
Sbjct: 196 MPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKAL 246

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = +1

Query: 379 YEFIKSSLVNLLLFSRLDRIT-ANRIVAEMYALPVQAGEILIQQGDSGDAATKLFVVRSG 555
           YE + +S+  L      +R+  A+ +V++ Y      GE +I+QGD+ D    ++ +  G
Sbjct: 233 YEELLNSVPMLKALQNYERMNLADALVSKSY----DNGERIIKQGDAADG---MYFIEEG 285

Query: 556 KFEVLERRKDVMFKVNTKERGDVFGEISLMYDCPRSATVAAT 681
              V   + D   +++   +G  FGE++L+   PR+A+V AT
Sbjct: 286 TVSVRMDQDDAEVEISQLGKGQYFGELALVTHRPRAASVYAT 327

>sp|P31320|KAPR_BLAEM cAMP-dependent protein kinase regulatory chain
           gi|285215|pir||A43435 protein kinase (EC 2.7.1.37),
           cAMP-dependent, type II regulatory chain - fungus
           (Blastocladiella emersonii) gi|167192|gb|AAA33016.1|
           cAMP-dependent protein kinase regulatory subunit
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 77/239 (32%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
 Frame = +1

Query: 112 PDNLARQALEALKKLDAQLAAESSGSDWEGDMG---ADNSKYADGEGGQVAYIAQRTQVG 282
           P   A  A  A   +DA  AA ++   +  D G    D+    D E  + A        G
Sbjct: 54  PATKATIASTAGPAVDADEAARANSYAYSTDDGFGTEDDDDDDDDEDDEAAIPPPVVNRG 113

Query: 283 RAKAITANKVLGGATKLDI--KLPPKASRADATDYEFIKSSLVNLLLFSRLDRITANRIV 456
           R  +++A  +   A  +D    + PK+    A     I++S+ N  LF  LD      +V
Sbjct: 114 RRTSVSAESMAPTAHDVDAVKTVIPKSDEQRAR----IQASIGNNFLFRNLDEDQYTDVV 169

Query: 457 AEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVLERRK---DVMFKVNTKERGDVF 627
             M    V AGE++I+QG  GD     +VV +G  +V   R    DV  KV     G  F
Sbjct: 170 NAMAEKKVAAGEVVIRQGGVGDY---FYVVETGALDVFVNRNGNGDV--KVTDYSAGGSF 224

Query: 628 GEISLMYDCPRSATVAATTDASVWVLERDVFRHFVQASVEDEKGQIQLFLNSVPLLSSL 804
           GE++LMY+ PR+ATV AT ++ +W L+R  FR  +      ++   + FL  VPLLSSL
Sbjct: 225 GELALMYNAPRAATVVATAESVLWALDRVTFRRILMDHTSRKRRMYEAFLEEVPLLSSL 283

 Score = 42.4 bits (98), Expect = 0.009
 Identities = 26/91 (28%), Positives = 51/91 (55%), Gaps = 3/91 (3%)
 Frame = +1

Query: 415 LFSRLDRITANRIVAEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVL---ERRKD 585
           L S L+    ++I   + ++    G+++I+QGD G+     +++ +G  EV+   E  ++
Sbjct: 279 LLSSLEPYERHKIADALESVAYADGDVVIRQGDVGE---NFYIIEAGDAEVIKIDENGEE 335

Query: 586 VMFKVNTKERGDVFGEISLMYDCPRSATVAA 678
             F+     +G+ FGE++L+ D PR AT+ A
Sbjct: 336 HHFR--PLHKGNYFGELALLSDKPRVATIRA 364

>gb|AAA33015.1| cAMP-dependent protein kinase regulatory subunit
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 77/239 (32%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
 Frame = +1

Query: 112 PDNLARQALEALKKLDAQLAAESSGSDWEGDMG---ADNSKYADGEGGQVAYIAQRTQVG 282
           P   A  A  A   +DA  AA ++   +  D G    D+    D E  + A        G
Sbjct: 54  PATKATIASTAGPAVDADEAARANSYAYSTDDGFGTEDDDDDDDDEDDEAAIPPPVVNRG 113

Query: 283 RAKAITANKVLGGATKLDI--KLPPKASRADATDYEFIKSSLVNLLLFSRLDRITANRIV 456
           R  +++A  +   A  +D    + PK+    A     I++S+ N  LF  LD      +V
Sbjct: 114 RRTSVSAESMAPTAHDVDAVKTVIPKSDEQRAR----IQASIGNNFLFRNLDEDQYTDVV 169

Query: 457 AEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVLERRK---DVMFKVNTKERGDVF 627
             M    V AGE++I+QG  GD     +VV +G  +V   R    DV  KV     G  F
Sbjct: 170 NAMAEKKVAAGEVVIRQGGVGDY---FYVVETGALDVFVNRNGNGDV--KVTDYSAGGSF 224

Query: 628 GEISLMYDCPRSATVAATTDASVWVLERDVFRHFVQASVEDEKGQIQLFLNSVPLLSSL 804
           GE++LMY+ PR+ATV AT ++ +W L+R  FR  +      ++   + FL  VPLLSSL
Sbjct: 225 GELALMYNAPRAATVVATAESVLWALDRVTFRRILMDHTSRKRRMYEAFLEEVPLLSSL 283

 Score = 42.4 bits (98), Expect = 0.009
 Identities = 26/91 (28%), Positives = 51/91 (55%), Gaps = 3/91 (3%)
 Frame = +1

Query: 415 LFSRLDRITANRIVAEMYALPVQAGEILIQQGDSGDAATKLFVVRSGKFEVL---ERRKD 585
           L S L+    ++I   + ++    G+++I+QGD G+     +++ +G  EV+   E  ++
Sbjct: 279 LLSSLEPYERHKIADALESVAYADGDVVIRQGDVGE---NFYIIEAGDAEVIKIDENGEE 335

Query: 586 VMFKVNTKERGDVFGEISLMYDCPRSATVAA 678
             F+     +G+ FGE++L+ D PR AT+ A
Sbjct: 336 HHFR--PLHKGNYFGELALLSDKPRVATIRA 364



EST assemble image


clone accession position
1 CL05d02_r AV393556 1 532
2 LCL066d12_r AV629805 4 518
3 LCL014f03_r AV626732 4 264
4 LCL082g01_r AV630687 4 394
5 LCL056b02_r AV629296 5 531
6 LCL087c05_r AV630985 5 474
7 LCL048f09_r AV628900 5 292
8 LCL078f02_r AV630419 6 518
9 LCL077h04_r AV630367 6 508
10 CL03c12_r AV393397 6 530
11 MXL031e02_r BP094876 6 322
12 LCL074h12_r AV630182 7 474
13 LCL077d11_r AV630334 7 518
14 LCL036a10_r AV628056 7 530
15 CL21e10_r AV394389 7 530
16 LCL011d05_r AV626562 30 170
17 LCL030e11_r AV627688 65 399
18 HCL067g09_r AV643336 96 509
19 LCL003c04_r AV626153 203 544
20 CL48h08_r AV395805 290 809




Chlamydomonas reinhardtii
Kazusa DNA Research Institute