KCC000064A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000064A_C01 KCC000064A_c01
CACACACACAGTCAGGCGGGTATTCGCAGCGCCATTAGTCGCGCGCGTCCCTAGATATCG
CCCCGGTGTCTCCGGAGGCTTTACCATCTTCCAGTCGAGACATCAGCCGCTCTGACTGAG
CCGCGCGGTCACTCGTCGCGCAATGGCTTCCAAGTTTCTGCTGCTGGCGCTCTTGGGCGC
CTTGGCGGCGCTTAGCGTGAATGCAGGTCGTGTGGACGCCACTGGCCGGACGCTTCTGCA
AGCCAAGCCTCCGCGGTTCCCTTACTGCCGCTGCGATGACCGCCTGCGTGTGAGCCCTTG
GCGCCTGAAGTGGGACGGCTACCTGCAGGGCGTTGCTAACAACGACTGGATCTGCTTCAA
GGTCTTCACCAACTTCACCGACACCCGGTGCACGGGGCCCGTCGACCTTGCAGCCCGCGT
GCTGCAAGCCGAACCTCTCGAAGCTCGAGTTCGATGTTGCCCCCGAGTGCAAGGGTACCT
CGAACCGTGCTCTGATCAACAAGGACGTGACCGACCTGAAGACCATCGCCGTTGAGGTGC
TGGACAATGGCCGCGCCATCCTGCGCATTTCTAAGGGCCTTGACTACTCCGCGGCCACGC
TTCCAGCTGGCGGCCTGTCTGTGTGCGTGAACCGCCTGGCTGGCCAGTGCACGATCAGCG
AGCTGTTCATGTCGCCGACCTCCGTGCAGTACGCCCTGTTCAACTCCAAGAACTGCTGCC
CCACCGGCGTCACCGGCCCCGGCGGCCCCACCTTCCCGACCCCCGTCTCTGCCCCTCCCC
CGCCGCTCCTGGACCGACCGGTAGCATTCCATTGGAGTGGAGAACACCGAGGAGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000064A_C01 KCC000064A_c01
         (835 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

prf||1604369A sulfated surface glycoprotein SSG185                    101  2e-20
sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)...   101  2e-20
dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]            42  1e-05
pir||T10798 pherophorin-S - Volvox carteri gi|1655699|emb|CAA690...    50  3e-05
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]         50  3e-05

>prf||1604369A sulfated surface glycoprotein SSG185
          Length = 453

 Score =  101 bits (251), Expect = 2e-20
 Identities = 67/169 (39%), Positives = 92/169 (53%), Gaps = 18/169 (10%)
 Frame = +3

Query: 333 LLTTTGSASRSSPTSPTPGARGPSTLQPACCKPNLSKLEFDVAPECKGTSNRALINKDVT 512
           +L TTG+  ++ P            L   CC  +L K+EFDV P CKGT  RA++ K + 
Sbjct: 75  VLDTTGTVCQTVP------------LTEPCCSADLYKIEFDVKPSCKGTVTRAMVFKGID 122

Query: 513 D-------LKTIAVEVLDN-----GRAILRISK--GLDYSA-ATLPAGGLSVCVNRLAGQ 647
                   L++I+   +D+     G AILRI K   L YS  A+    GL VC+NR+ G 
Sbjct: 123 RTVGGVRVLESISTVGIDDVTGVPGAAILRIVKDLALPYSVVASFLPNGLPVCINRVPGS 182

Query: 648 CTISELFMSPT-SVQYALFNS-KNCCPTGVTGPG-GPTFPTPVSAPPPP 785
           CT  ELFM    +  Y++FNS K+CCPTG++GP   P  P P ++P PP
Sbjct: 183 CTFPELFMDVNGTASYSVFNSDKDCCPTGLSGPNVNPIGPAPNNSPLPP 231

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +2

Query: 149 SKFLLLALLGALAALSVNAGRVDATGRTLLQAKPPR-FPYCRCDDRLRVSPWRLKWDGYL 325
           SK LL+AL GA+A ++ +A  ++  GR+LL    P  FPYC+C  R R SP+RLK+ G  
Sbjct: 2   SKLLLVALFGAIAVVATSAEVLNLNGRSLLNNDDPNAFPYCKCTYRQRRSPYRLKYVGAE 61

Query: 326 QGVANNDWICFKVFTNFTDTRC 391
                NDW+C+ +  + T T C
Sbjct: 62  NNYKGNDWLCYSIVLDTTGTVC 83

 Score = 35.8 bits (81), Expect = 0.89
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P ++ R  +PP SP P +PP   PS P P
Sbjct: 230 PPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPP 263

 Score = 33.9 bits (76), Expect = 3.4
 Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
 Frame = +3

Query: 420 CCKPNLSKLEFDVAPECKGT------SNRALINKDVTDLKTIAVEVLDNGRAILRISK-G 578
           CC   L K+E     +CKG+      SN A I    +          D+ R +L+ ++ G
Sbjct: 350 CCSDGLEKVELFANGKCKGSILPFTLSNTAEIRSSFS---------WDSTRPVLKFTRLG 400

Query: 579 LDYSAATLPAGGLSVCVNRLAGQCTISELFMSPTSVQYALFNS--KNCCP 722
           L Y+     AGG S+C N     CT             A+FN+    CCP
Sbjct: 401 LTYAQGV--AGG-SLCFNIKGAGCTKFADLCPGRGCTVAVFNNPDNTCCP 447

 Score = 33.5 bits (75), Expect = 4.4
 Identities = 15/36 (41%), Positives = 16/36 (43%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLPRR 786
           PP   P   P +  PP  P P  PP  PP  P P R
Sbjct: 266 PPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPR 301

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 14/34 (41%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP  +P   P    PP  P P +PP  PP  P P
Sbjct: 255 PPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPPP 288

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
 Frame = +1

Query: 676 RPPCSTPCSTPRTAAPPA-SPAPAAPPSRPPSLPLP 780
           RPP   P   P +  PP+ SP P  PP  PP  P P
Sbjct: 240 RPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPP 275

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP SP P  PP  PP  P P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPP 293

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/36 (41%), Positives = 16/36 (43%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLPRR 786
           PP   P   P    PP  P P  PP  PPS   PR+
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRK 302

>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
           sulfated surface glycoprotein 185 - Volvox carteri
           gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
           185 [Volvox carteri]
          Length = 485

 Score =  101 bits (251), Expect = 2e-20
 Identities = 68/170 (40%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
 Frame = +3

Query: 333 LLTTTGSASRSSPTSPTPGARGPSTLQPACCKPNLSKLEFDVAPECKGTSNRALINKDVT 512
           +L TTG+  ++ P            L   CC  +L K+EFDV P CKGT  RA++ K + 
Sbjct: 75  VLDTTGTVCQTVP------------LTEPCCSADLYKIEFDVKPSCKGTVTRAMVFKGI- 121

Query: 513 DLKTIAVEVLDN-------------GRAILRISK--GLDYS-AATLPAGGLSVCVNRLAG 644
           D     V VL++             G AILRI K   L YS  A+    GL VC+NR+ G
Sbjct: 122 DRTVGGVRVLESISTVGIDDVTGVPGAAILRIVKDLALPYSVVASFLPNGLPVCINRVPG 181

Query: 645 QCTISELFMSPT-SVQYALFNS-KNCCPTGVTGPG-GPTFPTPVSAPPPP 785
            CT  ELFM    +  Y++FNS K+CCPTG++GP   P  P P ++P PP
Sbjct: 182 SCTFPELFMDVNGTASYSVFNSDKDCCPTGLSGPNVNPIGPAPNNSPLPP 231

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +2

Query: 149 SKFLLLALLGALAALSVNAGRVDATGRTLLQAKPPR-FPYCRCDDRLRVSPWRLKWDGYL 325
           SK LL+AL GA+A ++ +A  ++  GR+LL    P  FPYC+C  R R SP+RLK+ G  
Sbjct: 2   SKLLLVALFGAIAVVATSAEVLNLNGRSLLNNDDPNAFPYCKCTYRQRRSPYRLKYVGAE 61

Query: 326 QGVANNDWICFKVFTNFTDTRC 391
                NDW+C+ +  + T T C
Sbjct: 62  NNYKGNDWLCYSIVLDTTGTVC 83

 Score = 35.8 bits (81), Expect = 0.89
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P ++ R  +PP SP P +PP   PS P P
Sbjct: 230 PPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPP 263

 Score = 33.9 bits (76), Expect = 3.4
 Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
 Frame = +3

Query: 420 CCKPNLSKLEFDVAPECKGT------SNRALINKDVTDLKTIAVEVLDNGRAILRISK-G 578
           CC   L K+E     +CKG+      SN A I    +          D+ R +L+ ++ G
Sbjct: 382 CCSDGLEKVELFANGKCKGSILPFTLSNTAEIRSSFS---------WDSTRPVLKFTRLG 432

Query: 579 LDYSAATLPAGGLSVCVNRLAGQCTISELFMSPTSVQYALFNS--KNCCP 722
           L Y+     AGG S+C N     CT             A+FN+    CCP
Sbjct: 433 LTYAQGV--AGG-SLCFNIKGAGCTKFADLCPGRGCTVAVFNNPDNTCCP 479

 Score = 33.5 bits (75), Expect = 4.4
 Identities = 15/36 (41%), Positives = 16/36 (43%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLPRR 786
           PP   P   P +  PP  P P  PP  PP  P P R
Sbjct: 266 PPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPR 301

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 14/34 (41%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP  +P   P    PP  P P +PP  PP  P P
Sbjct: 255 PPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPPP 288

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
 Frame = +1

Query: 676 RPPCSTPCSTPRTAAPPA-SPAPAAPPSRPPSLPLP 780
           RPP   P   P +  PP+ SP P  PP  PP  P P
Sbjct: 240 RPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPP 275

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP SP P  PP  PP  P P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPP 293

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/36 (41%), Positives = 16/36 (43%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLPRR 786
           PP   P   P    PP  P P  PP  PPS   PR+
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRK 302

>dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]
          Length = 606

 Score = 42.4 bits (98), Expect(2) = 1e-05
 Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
 Frame = +3

Query: 399 PSTLQPACCKPNLSKLEFDVAPECKGTSNRALINKDVTDLKTIAVEVLDN------GRAI 560
           P +    CC  +L K+EF+V+  C      A +   V   KT+     D       G A+
Sbjct: 78  PLSCSGPCCNADLHKIEFNVSSSCLVAG--ASVIASVNGRKTMIAPAFDRPATGPPGSAV 135

Query: 561 LRISK-GLDYSAATLPAGGLSVCVNRLAGQCTISELFMSPTSV-----QYALFNSK-NCC 719
           LRI+  GL    A      L +  NR    CT  +   +   +       A +++  +CC
Sbjct: 136 LRITNLGLTTETAQNAELCLVLRTNRGGQGCTTLQQLCTSAGLPAGTCTVATYDAACDCC 195

Query: 720 PTGVT----GPGGPTFPTPVSAPPPP 785
           P  +      P  P  P P S PPPP
Sbjct: 196 PQNIVVEPQPPPPPPPPPPPSPPPPP 221

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 17/34 (50%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP S P   P    PP SP P  PP  PPS P P
Sbjct: 225 PPPSPP--PPPPPPPPPSPPPPPPPPPPPSPPPP 256

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 17/34 (50%), Positives = 17/34 (50%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP S P   P    PP SP P  PP  PPS P P
Sbjct: 213 PPPSPP--PPPPPPPPPSPPPPPPPPPPPSPPPP 244

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 9/50 (18%)
 Frame = +1

Query: 658 ASCSC---------RRPPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           A+C C         + PP   P   P    PP  P P +PP  PP  P P
Sbjct: 190 AACDCCPQNIVVEPQPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPPPP 239

 Score = 32.3 bits (72), Expect = 9.8
 Identities = 14/34 (41%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P  +P    PP SP+P  PP  P   P P
Sbjct: 253 PPPPPPPPSPSPPPPPPSPSPPPPPPPPSPPPAP 286

 Score = 32.3 bits (72), Expect = 9.8
 Identities = 14/34 (41%), Positives = 15/34 (43%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P  +P    P  SP P  PP  PP  P P
Sbjct: 255 PPPPPPSPSPPPPPPSPSPPPPPPPPSPPPAPPP 288

 Score = 29.3 bits (64), Expect(2) = 1e-05
 Identities = 24/86 (27%), Positives = 35/86 (39%), Gaps = 4/86 (4%)
 Frame = +2

Query: 155 FLLLALLGALAALSVNAGRVDATGRTLLQAKPPRFPYCRCDDR---LRVSP-WRLKWDGY 322
           FL L+ L    A+  +A   D     +     P FPY +C+      R++P WR      
Sbjct: 8   FLFLSTLAVGWAIGADAQEYDYDPSRVQTGTTPDFPYRKCNTTNGPYRLNPVWRF----- 62

Query: 323 LQGVANNDWICFKVFTNFTDTRCTGP 400
              VAN  + CF +        C+GP
Sbjct: 63  ---VANRIY-CFTIQVKLDPLSCSGP 84

>pir||T10798 pherophorin-S - Volvox carteri gi|1655699|emb|CAA69032.1|
           pherophorin-S [Volvox carteri]
          Length = 599

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
 Frame = +3

Query: 420 CCKPNLSKLEFDVAPEC---KGTSNRALINKDVTDLKTIAVEVLD--NGRAILRISK-GL 581
           CC  +L K+EF+V+  C        +A IN   T +       ++  NG A+LR+++ GL
Sbjct: 90  CCGVDLHKIEFNVSDSCIVQPAAEAKATINGVYTRIGAAFGRPVNGRNGTAVLRLTQLGL 149

Query: 582 DYSAATLPAGGLSVCV----NRLAGQCTISELFMSPTS------VQYALFNSK-NCCPTG 728
           D    T  A    VC+    NRL   CT  E   +P           A+F++   CCP  
Sbjct: 150 D----TTSAQNAEVCIILKNNRLGKGCTTLEQLCTPPPGYPSGFCAAAIFDTTCECCPIS 205

Query: 729 VTG------PGGPTFPTPVSAPPPP 785
                    P  P  P P S PPPP
Sbjct: 206 QASTLPLPLPNAPPSPLPPSPPPPP 230

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 27/92 (29%), Positives = 30/92 (32%), Gaps = 19/92 (20%)
 Frame = +1

Query: 562 CAFLRALTTPRPRFQLAACLCA*TAWLASARSASCSC--------------RRPPCSTPC 699
           C  L  L TP P +    C        A+    +C C                PP   P 
Sbjct: 172 CTTLEQLCTPPPGYPSGFCA-------AAIFDTTCECCPISQASTLPLPLPNAPPSPLPP 224

Query: 700 STPRTAAP-----PASPAPAAPPSRPPSLPLP 780
           S P    P     P  P P  PPS PPS P P
Sbjct: 225 SPPPPPPPSPPPSPPPPPPPPPPSPPPSPPPP 256

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 15/34 (44%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP SP P+ PP  PP  P P
Sbjct: 231 PPSPPPSPPPPPPPPPPSPPPSPPPPPPPPPPPP 264

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 15/34 (44%), Positives = 17/34 (49%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P S P +  PP  P P +PP  PP  P P
Sbjct: 226 PPPPPPPSPPPSPPPPPPPPPPSPPPSPPPPPPP 259

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 15/34 (44%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP  P P+ PPS PP  P P
Sbjct: 227 PPPPPPSPPPSPPPPPPPPPPSPPPSPPPPPPPP 260

 Score = 34.3 bits (77), Expect = 2.6
 Identities = 15/34 (44%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P   +PP SP P  PP  PP  P P
Sbjct: 235 PPSPPPPPPPPPPSPPPSPPPPPPPPPPPPPPPP 268

 Score = 33.5 bits (75), Expect = 4.4
 Identities = 15/34 (44%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P S P +  PP  P P  PP  PP  P P
Sbjct: 241 PPPPPPPSPPPSPPPPPPPPPPPPPPPPPPPPPP 274

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P S P    PP  P P  PP  PP  P P
Sbjct: 269 PPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPP 302

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP SP P  PP  PP  P P
Sbjct: 259 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPP 292

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P   P    PP  P P  PP  PP  P P
Sbjct: 246 PPSPPPSPPPPPPPPPPPPPPPPPPPPPPPSPPP 279

 Score = 32.7 bits (73), Expect = 7.5
 Identities = 14/34 (41%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP  +P  +P    PP  P P  PP  PP  P P
Sbjct: 244 PPPPSPPPSPPPPPPPPPPPPPPPPPPPPPPPSP 277

 Score = 32.3 bits (72), Expect = 9.8
 Identities = 15/34 (44%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP S P S P    PP    P +PP  PP  P P
Sbjct: 230 PPPSPPPSPPPPPPPPPPSPPPSPPPPPPPPPPP 263

 Score = 32.3 bits (72), Expect = 9.8
 Identities = 14/34 (41%), Positives = 16/34 (46%)
 Frame = +1

Query: 679 PPCSTPCSTPRTAAPPASPAPAAPPSRPPSLPLP 780
           PP   P  +P  + PP  P P  PP  PP  P P
Sbjct: 240 PPPPPPPPSPPPSPPPPPPPPPPPPPPPPPPPPP 273

>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
          Length = 250

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 63/228 (27%), Positives = 86/228 (37%), Gaps = 2/228 (0%)
 Frame = +1

Query: 91  PVETSAALTEPRGHSSRNGFQVSAAGALGRLGGA*RECRSCGRHWPDASASQASAVPLLP 270
           P   S A T PR   +R   + S      R        R+  R  P  ++ + +     P
Sbjct: 31  PPTASPARTPPRASPARTPPRASPGRTPPRASPRRTPPRASPRRAPPRASPRRTPPTASP 90

Query: 271 LR*PPACEPLAPEVGRLPAGRC*QRLDLLQGLHQLHRHPVHGARRPCSPRAA-SRTS-RS 444
            R PP   P        PA                 R P   + R   PRA+ +RT  R+
Sbjct: 91  TRTPPTESPARTPPTASPA-----------------RTPSRASPRRTPPRASPTRTPPRA 133

Query: 445 SSSMLPPSARVPRTVL*STRT*PT*RPSPLRCWTMAAPSCAFLRALTTPRPRFQLAACLC 624
           S    PP A   RT   ++ T    R SP R    A+P+    RA  T  P  +  A   
Sbjct: 134 SPRRTPPRASPRRTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRTPPTESPARTP 193

Query: 625 A*TAWLASARSASCSCRRPPCSTPCSTPRTAAPPASPAPAAPPSRPPS 768
             TA  A   S +   R PP ++P  TP  A+P  +P  A+P   PP+
Sbjct: 194 P-TASPARTPSRASPRRMPPRASPTRTPPRASPTRTPPRASPKRTPPT 240

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 62/253 (24%), Positives = 85/253 (33%)
 Frame = +1

Query: 28  SAISRARP*ISPRCLRRLYHLPVETSAALTEPRGHSSRNGFQVSAAGALGRLGGA*RECR 207
           ++++R  P  SP         P   S A T P    +R   + S A    R        R
Sbjct: 7   TSLTRTPPTASPA------RTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPR 60

Query: 208 SCGRHWPDASASQASAVPLLPLR*PPACEPLAPEVGRLPAGRC*QRLDLLQGLHQLHRHP 387
           +  R  P  ++ + +     P R PP   P        PA                    
Sbjct: 61  ASPRRTPPRASPRRAPPRASPRRTPPTASPTRTPPTESPA-------------------- 100

Query: 388 VHGARRPCSPRAASRTSRSSSSMLPPSARVPRTVL*STRT*PT*RPSPLRCWTMAAPSCA 567
               R P +   A   SR+S    PP A   RT   ++      R SP R    A+P+ A
Sbjct: 101 ----RTPPTASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRA 156

Query: 568 FLRALTTPRPRFQLAACLCA*TAWLASARSASCSCRRPPCSTPCSTPRTAAPPASPAPAA 747
             RA     P                     +   R PP ++P  TP T +P  +P P A
Sbjct: 157 PPRASPKRTP-------------------PRASPTRTPPRASPTRTPPTESPARTP-PTA 196

Query: 748 PPSRPPSLPLPRR 786
            P+R PS   PRR
Sbjct: 197 SPARTPSRASPRR 209

 Score = 39.3 bits (90), Expect = 0.080
 Identities = 45/136 (33%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
 Frame = +1

Query: 400 RRPCSPRAASRTSRSSSSMLPPS---ARVPRTVL*STRT*PT*RPSPLRCWTMAAPSCAF 570
           R P +         +S +  PP+   AR P T     RT P  R SP R    A+P    
Sbjct: 2   RTPYTTSLTRTPPTASPARTPPTESPARTPPTAS-PARTPP--RASPARTPPRASPGRTP 58

Query: 571 LRALTTPRPRFQLAACLCA*TAWLASARSA---SCSCRRPPCSTPCSTPRTAAPPASPAP 741
            RA  +PR            T   AS R A   +   R PP ++P  TP T +P  +P P
Sbjct: 59  PRA--SPRR-----------TPPRASPRRAPPRASPRRTPPTASPTRTPPTESPARTP-P 104

Query: 742 AAPPSRPPSLPLPRRS 789
            A P+R PS   PRR+
Sbjct: 105 TASPARTPSRASPRRT 120

 Score = 37.4 bits (85), Expect = 0.31
 Identities = 47/147 (31%), Positives = 59/147 (39%), Gaps = 8/147 (5%)
 Frame = +1

Query: 379 RHPVHGARRPCSPRAASRTS--RSSSSMLPPSARVPRTVL*ST--RT*PT*RPSPLRCWT 546
           R P   + R   PRA+ R +  R+S    PP+A   RT    +  RT PT   SP R  +
Sbjct: 56  RTPPRASPRRTPPRASPRRAPPRASPRRTPPTASPTRTPPTESPARTPPT--ASPARTPS 113

Query: 547 MAAPSCAFLRALTTPRPRFQLAACLCA*TAWLASARSASCSCRRPPCSTPCSTPR----T 714
            A+P     RA  T  P               AS R      R PP ++P  TP     T
Sbjct: 114 RASPRRTPPRASPTRTPP-------------RASPR------RTPPRASPRRTPPRASPT 154

Query: 715 AAPPASPAPAAPPSRPPSLPLPRRSWT 795
            APP +     PP   P+   PR S T
Sbjct: 155 RAPPRASPKRTPPRASPTRTPPRASPT 181



EST assemble image


clone accession position
1 MXL013h09_r BP093798 1 489
2 MXL013g01_r BP093784 1 253
3 MX256d12_r BP092597 2 454
4 MXL008g02_r BP093461 3 336
5 MX219f02_r BP090147 3 406
6 MX239a07_r BP091453 4 297
7 MXL039a07_r BP095260 5 388
8 CL02g12_r AV397630 7 547
9 MXL027d01_r BP094684 26 307
10 CL50c11_r AV395751 27 512
11 MXL013e09_r BP093771 69 394
12 LCL080g01_r AV630558 147 515
13 MXL013h05_r BP093794 198 353
14 CM024d10_r AV388248 364 865
15 CM018h04_r AV387256 555 836




Chlamydomonas reinhardtii
Kazusa DNA Research Institute