KCC000057A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000057A_C02 KCC000057A_c02
CGGCAATCTTACGGAACCGCGTAATCACACTGCAATTATTGTTCAAACAAAGCTTACTAC
GACTAACTCTCGCTGCAACATCTGCGTTCCGAAAGCGGCCTCCTAGACCTTGGCGAGTTT
GCGCTCTGTTTCGCTTAGTGGACGAGAATGATGTCCTCCAGCCTCGTCTCTGGCAAGAGG
GTTGCCGTGCCCTCTGCTGCCAAGCCCTGTGCTGCTGTGCCGCTGCCCCGCGTGGCCGGT
CGCCGGACTGCTGCACGCGTTGTCTGCGAGGCTGCTCCCTCTGGCGCCGCCCCTGCCAGC
CCCAAGGCTGAGGCTGCTGCGCCCGTTGCCGCTGCCCCGGCCACCCCCCATGCTGAGGTG
AAGAAGGAGCGCGCCCCCAGCCACCGATGAGGCGCTGACGGAGCTGAAGGCGCTGCTGAA
GCGCGCCCAGACCGCCCAGGCGCAGTACTCCACCTACACCCAGGAGCAGGTGGACGAGAT
CTTCCGCGCCGCCGCCGAGGCCGCCAACGCCGCCCGTATCCCCCTGGCCAAGATGGCCGT
GGAGGAGACCCGCATGGGCGTGGCTGAGGACAAGGTGGTGAAGAACCACTTCGCCTCCGA
GTTCATCTACAACAAGTACAAGCACACTAAGACCTGCGGCGTCATCGAGCACGACCCCGC
CGGCGGCATCCAGAAGGTGGCTGAGCCCGTGGGCGTCATTGCCGGTATCGTGCCCACCAC
CAACCCCACCTCCACCGCCATCTTCAAGTCGCTGCTGTCGCTCAAGACCCGCAACGCGCT
GGTGCTGTGCCCGCACCCCCGCGCCGCCAAGAGCACCATCGCCGCCGCGCGCATCGTGCG
TGACGCCGCCGTGGCCGCCGGCGCGCCGCCCAACATCATCAGCTGGGTGGAGACGCCCTC
GCTGCCGGTGTCCCAGGCGCTGATGCAGGCGACTGAGATCAACCTCATCCTGGCCACCGG
TGGCCCGGCCATGGTGCGCGCCGCCTACTCGTCCGGCAACCCGTCGCTGGGTGTGGGCGC
CGGCAACACCCCGGCCCTGATTGACGAGACTGCCGACGTGGCCATGGCCGTGTCCTCCAT
CCTGCTGTCCAAGACCTTTGACAACGGCGTCATCTGCGCCTCGGAGCAGTCGGTGGTGGT
GGTGGCCAAGGCCTACGACGCCGTGCGCACCGAGTTCGTGCGCCGCGGGGCCTACTTCCT
GACCGAGGACGACAAGGTCAAGGTCCGCGCCGGTGTGGTTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000057A_C02 KCC000057A_c02
         (1242 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_681018.1| CoA-linked acetaldehyde dehydrogenase and iron-...   388  e-106
ref|ZP_00060060.1| COG1012: NAD-dependent aldehyde dehydrogenase...   369  e-101
ref|NP_563447.1| aldehyde-alcohol dehydrogenase E [Clostridium p...   365  e-100
ref|NP_149199.1| Aldehyde-alcohol dehydrogenase, ADHE1 [Clostrid...   365  e-100
ref|NP_231667.1| alcohol dehydrogenase/acetaldehyde dehydrogenas...   363  3e-99

>ref|NP_681018.1| CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol
            dehydrogenase / pyruvate-formate-lyase deactivase
            [Thermosynechococcus elongatus BP-1]
            gi|22293948|dbj|BAC07780.1| CoA-linked acetaldehyde
            dehydrogenase and iron-dependent alcohol dehydrogenase /
            pyruvate-formate-lyase deactivase [Thermosynechococcus
            elongatus BP-1]
          Length = 885

 Score =  388 bits (996), Expect = e-106
 Identities = 190/286 (66%), Positives = 236/286 (82%)
 Frame = +2

Query: 368  SAPPATDEALTELKALLKRAQTAQAQYSTYTQEQVDEIFRAAAEAANAARIPLAKMAVEE 547
            S PP   ++L +L+ L++R Q AQ+QY+ +TQEQVD IF  AA AAN ARIPLAK AV E
Sbjct: 8    SDPPV--QSLADLEGLIERVQRAQSQYAQFTQEQVDHIFHEAAMAANQARIPLAKQAVAE 65

Query: 548  TRMGVAEDKVVKNHFASEFIYNKYKHTKTCGVIEHDPAGGIQKVAEPVGVIAGIVPTTNP 727
            T MGV EDKV+KNHFASE+IYNKYK+ KTCGVIE DP  GIQK+AEPVG+IAG+VP TNP
Sbjct: 66   TGMGVVEDKVIKNHFASEYIYNKYKNEKTCGVIEDDPIFGIQKIAEPVGIIAGVVPVTNP 125

Query: 728  TSTAIFKSLLSLKTRNALVLCPHPRAAKSTIAAARIVRDAAVAAGAPPNIISWVETPSLP 907
            TST IFK+L++LKTRN ++  PHPRA   T+AAA++V DAAVAAGAPP+II W++ P++ 
Sbjct: 126  TSTTIFKALIALKTRNGIIFSPHPRAKACTVAAAKVVLDAAVAAGAPPDIIGWIDEPTIE 185

Query: 908  VSQALMQATEINLILATGGPAMVRAAYSSGNPSLGVGAGNTPALIDETADVAMAVSSILL 1087
            +SQALMQ  +I LILATGGP MV+AAYSSG+P++GVGAGNTP LID TAD+  AVSSILL
Sbjct: 186  LSQALMQHPQIKLILATGGPGMVKAAYSSGHPAIGVGAGNTPVLIDATADIPTAVSSILL 245

Query: 1088 SKTFDNGVICASEQSVVVVAKAYDAVRTEFVRRGAYFLTEDDKVKV 1225
            SK FDNG+ICASEQ+V+VV + YDA++ EF RRGAY L+ +++ +V
Sbjct: 246  SKAFDNGMICASEQAVIVVDEIYDALKAEFQRRGAYLLSPEERQQV 291

>ref|ZP_00060060.1| COG1012: NAD-dependent aldehyde dehydrogenases [Clostridium
            thermocellum ATCC 27405]
          Length = 882

 Score =  369 bits (948), Expect = e-101
 Identities = 181/280 (64%), Positives = 231/280 (81%)
 Frame = +2

Query: 401  ELKALLKRAQTAQAQYSTYTQEQVDEIFRAAAEAANAARIPLAKMAVEETRMGVAEDKVV 580
            +L+  LKR + AQ+ Y+TYTQEQVD+IF  AA AAN  RIPLAKMAVEET MGV EDKV+
Sbjct: 25   KLEKALKRLREAQSVYATYTQEQVDKIFFEAAMAANKMRIPLAKMAVEETGMGVVEDKVI 84

Query: 581  KNHFASEFIYNKYKHTKTCGVIEHDPAGGIQKVAEPVGVIAGIVPTTNPTSTAIFKSLLS 760
            KNH+ASE+IYN YK+TKTCGVIE DPA GI+K+AEP+GVIA ++PTTNPTSTAIFK+L++
Sbjct: 85   KNHYASEYIYNAYKNTKTCGVIEEDPAFGIKKIAEPLGVIAAVIPTTNPTSTAIFKTLIA 144

Query: 761  LKTRNALVLCPHPRAAKSTIAAARIVRDAAVAAGAPPNIISWVETPSLPVSQALMQATEI 940
            LKTRNA+++ PHPRA  STI AA+IV +AAV AGAP  II W++ PSL ++  +M+  E 
Sbjct: 145  LKTRNAIIISPHPRAKNSTIEAAKIVLEAAVKAGAPEGIIGWIDVPSLELTNLVMR--EA 202

Query: 941  NLILATGGPAMVRAAYSSGNPSLGVGAGNTPALIDETADVAMAVSSILLSKTFDNGVICA 1120
            ++ILATGGP +V+AAYSSG P++GVGAGNTPA+ID++AD+ +AV+SI+ SKTFDNG+ICA
Sbjct: 203  DVILATGGPGLVKAAYSSGKPAIGVGAGNTPAIIDDSADIVLAVNSIIHSKTFDNGMICA 262

Query: 1121 SEQSVVVVAKAYDAVRTEFVRRGAYFLTEDDKVKVRAGVV 1240
            SEQSV+V+   Y  V+ EF +RG YFL ED+  KVR  ++
Sbjct: 263  SEQSVIVLDGVYKEVKKEFEKRGCYFLNEDETEKVRKTII 302

>ref|NP_563447.1| aldehyde-alcohol dehydrogenase E [Clostridium perfringens]
            gi|18146197|dbj|BAB82237.1| aldehyde-alcohol
            dehydrogenase E [Clostridium perfringens str. 13]
          Length = 865

 Score =  365 bits (938), Expect = e-100
 Identities = 186/280 (66%), Positives = 226/280 (80%)
 Frame = +2

Query: 401  ELKALLKRAQTAQAQYSTYTQEQVDEIFRAAAEAANAARIPLAKMAVEETRMGVAEDKVV 580
            EL   L++ + AQ ++S ++QEQVDEIFR AA AAN  RI LAKMAVEE+ MG+ EDKV+
Sbjct: 8    ELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMGIVEDKVI 67

Query: 581  KNHFASEFIYNKYKHTKTCGVIEHDPAGGIQKVAEPVGVIAGIVPTTNPTSTAIFKSLLS 760
            KNHFA+E+IYNKYK  KTCGVIE D + GI K+AEP+GV+A IVPTTNPTSTAIFK+L+S
Sbjct: 68   KNHFAAEYIYNKYKDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTAIFKALIS 127

Query: 761  LKTRNALVLCPHPRAAKSTIAAARIVRDAAVAAGAPPNIISWVETPSLPVSQALMQATEI 940
            LKTRNA+   PHPRA  STI AAR+V +AAV AGAP +II W++ PS+ +SQ LM   E 
Sbjct: 128  LKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKAGAPKDIIGWIDEPSVEMSQVLM--AEA 185

Query: 941  NLILATGGPAMVRAAYSSGNPSLGVGAGNTPALIDETADVAMAVSSILLSKTFDNGVICA 1120
            ++ILATGGP MV+AAYSSG P++GVGAGNTPA+IDETA + MAV+SILLSKTFDNGVICA
Sbjct: 186  DIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDNGVICA 245

Query: 1121 SEQSVVVVAKAYDAVRTEFVRRGAYFLTEDDKVKVRAGVV 1240
            SEQ+V+VV K YD VR EF  RGAYFL + +  KVR  ++
Sbjct: 246  SEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTIL 285

>ref|NP_149199.1| Aldehyde-alcohol dehydrogenase, ADHE1 [Clostridium acetobutylicum]
            gi|12958626|gb|AAK09379.1|AF321779_1 aldehyde/alcohol
            dehydrogenase [Clostridium acetobutylicum]
            gi|14994351|gb|AAK76781.1|AE001438_34 Aldehyde-alcohol
            dehydrogenase, ADHE1 [Clostridium acetobutylicum]
          Length = 858

 Score =  365 bits (937), Expect = e-100
 Identities = 177/276 (64%), Positives = 230/276 (83%)
 Frame = +2

Query: 401  ELKALLKRAQTAQAQYSTYTQEQVDEIFRAAAEAANAARIPLAKMAVEETRMGVAEDKVV 580
            ELK  L   + AQ +++TYTQEQVD+IF+  A AA   RI LAK+AVEET +G+ EDK++
Sbjct: 8    ELKQKLNELREAQKKFATYTQEQVDKIFKQCAIAAAKERINLAKLAVEETGIGLVEDKII 67

Query: 581  KNHFASEFIYNKYKHTKTCGVIEHDPAGGIQKVAEPVGVIAGIVPTTNPTSTAIFKSLLS 760
            KNHFA+E+IYNKYK+ KTCG+I+HD + GI KVAEP+G++A IVPTTNPTSTAIFKSL+S
Sbjct: 68   KNHFAAEYIYNKYKNEKTCGIIDHDDSLGITKVAEPIGIVAAIVPTTNPTSTAIFKSLIS 127

Query: 761  LKTRNALVLCPHPRAAKSTIAAARIVRDAAVAAGAPPNIISWVETPSLPVSQALMQATEI 940
            LKTRNA+   PHPRA KSTIAAA+++ DAAV AGAP NII W++ PS+ +SQ LM  +E 
Sbjct: 128  LKTRNAIFFSPHPRAKKSTIAAAKLILDAAVKAGAPKNIIGWIDEPSIELSQDLM--SEA 185

Query: 941  NLILATGGPAMVRAAYSSGNPSLGVGAGNTPALIDETADVAMAVSSILLSKTFDNGVICA 1120
            ++ILATGGP+MV+AAYSSG P++GVGAGNTPA+IDE+AD+ MAVSSI+LSKT+DNGVICA
Sbjct: 186  DIILATGGPSMVKAAYSSGKPAIGVGAGNTPAIIDESADIDMAVSSIILSKTYDNGVICA 245

Query: 1121 SEQSVVVVAKAYDAVRTEFVRRGAYFLTEDDKVKVR 1228
            SEQS++V+   Y+ V+ EFV+RG+Y L +++  K++
Sbjct: 246  SEQSILVMNSIYEKVKEEFVKRGSYILNQNEIAKIK 281

>ref|NP_231667.1| alcohol dehydrogenase/acetaldehyde dehydrogenase [Vibrio cholerae O1
            biovar eltor str. N16961] gi|11251415|pir||D82127 alcohol
            dehydrogenase/acetaldehyde dehydrogenase VC2033
            [imported] - Vibrio cholerae (strain N16961 serogroup O1)
            gi|9656578|gb|AAF95181.1| alcohol
            dehydrogenase/acetaldehyde dehydrogenase [Vibrio cholerae
            O1 biovar eltor str. N16961]
          Length = 894

 Score =  363 bits (933), Expect = 3e-99
 Identities = 179/278 (64%), Positives = 224/278 (80%)
 Frame = +2

Query: 395  LTELKALLKRAQTAQAQYSTYTQEQVDEIFRAAAEAANAARIPLAKMAVEETRMGVAEDK 574
            L EL AL+ R + AQA+++T++QEQVD+IFRAA+ AAN ARIPLA+MAVEE+ MG+ EDK
Sbjct: 6    LAELDALVARVKAAQAEFATFSQEQVDKIFRAASLAANQARIPLAQMAVEESGMGIVEDK 65

Query: 575  VVKNHFASEFIYNKYKHTKTCGVIEHDPAGGIQKVAEPVGVIAGIVPTTNPTSTAIFKSL 754
            V+KNHFASEFIYNKYK  KTCG++E D   G   +AEPVG+I GIVPTTNPTSTAIFKSL
Sbjct: 66   VIKNHFASEFIYNKYKDEKTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSL 125

Query: 755  LSLKTRNALVLCPHPRAAKSTIAAARIVRDAAVAAGAPPNIISWVETPSLPVSQALMQAT 934
            +SLKTRN ++  PHPRA  ST AAA++V DAA+AAGAP +II W++ PS+ +S ALM+  
Sbjct: 126  ISLKTRNGIIFSPHPRAKNSTNAAAKLVLDAAIAAGAPKDIIGWIDQPSVELSNALMKHD 185

Query: 935  EINLILATGGPAMVRAAYSSGNPSLGVGAGNTPALIDETADVAMAVSSILLSKTFDNGVI 1114
             I LILATGGP MV+AAYSSG P++GVGAGN P +IDETAD+  AV+SIL+SKTFDNGV+
Sbjct: 186  GIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASILMSKTFDNGVV 245

Query: 1115 CASEQSVVVVAKAYDAVRTEFVRRGAYFLTEDDKVKVR 1228
            CASEQ+ +VV++ YD V+  F    A+ L++ D  KVR
Sbjct: 246  CASEQAAIVVSEVYDEVKERFATHKAHVLSKADADKVR 283



EST assemble image


clone accession position
1 LCL098f06_r AV631717 1 414
2 MXL038c03_r BP095219 1 411
3 MXL002a02_r BP092997 1 448
4 MXL023g05_r BP094482 1 461
5 MXL008f10_r BP093460 1 449
6 MXL070h07_r BP097149 2 336
7 MXL038h05_r BP095252 2 223
8 MXL044c07_r BP095590 2 379
9 MXL091f05_r BP098330 2 450
10 MXL089c07_r BP098202 2 361
11 HCL098g03_r AV645141 2 448
12 HCL017c10_r AV640496 2 467
13 CL02f04_r AV397610 8 525
14 MXL081e11_r BP097804 10 389
15 MXL035g03_r BP095093 12 401
16 MXL019b04_r BP094175 13 449
17 HCL009f10_r AV640066 14 244
18 HCL083d08_r AV644181 21 524
19 MXL014e05_r BP093838 48 462
20 MXL034d02_r BP095009 163 559
21 MXL091e10_r BP098325 311 787
22 MXL008c07_r BP093429 383 502
23 MXL098b06_r BP098730 472 828
24 MXL082h09_r BP097884 472 916
25 HCL008d12_r AV639995 735 1242




Chlamydomonas reinhardtii
Kazusa DNA Research Institute