Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000051A_C03 KCC000051A_c03
(1971 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK27413.1| elongation factor 1 alpha long form [Monosiga bre... 344 3e-93
dbj|BAC67663.1| elongation factor-1alpha [Pleodorina sp. 2000-60... 209 1e-84
sp|P90519|EF1A_CRYPV ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) gi|1... 122 5e-67
pir||S54734 translation elongation factor aEF-1 alpha chain - De... 121 2e-63
sp|P41203|EF1A_DESMO Elongation factor 1-alpha (EF-1-alpha) (Elo... 121 2e-63
>gb|AAK27413.1| elongation factor 1 alpha long form [Monosiga brevicollis]
Length = 462
Score = 344 bits (883), Expect = 3e-93
Identities = 217/475 (45%), Positives = 273/475 (56%), Gaps = 12/475 (2%)
Frame = +3
Query: 57 MSEGKEHLSIVICGHVDSGKSTTTGRLAVRRSAVSPERELEKLKEEAAALGKSSFAFAFY 236
M++GK+H+SIVICGHVD+GKSTTTGRL + PERE++KLK+EA LGK SFAFAFY
Sbjct: 1 MTDGKQHVSIVICGHVDAGKSTTTGRLIFELGGI-PEREMQKLKDEAERLGKGSFAFAFY 59
Query: 237 MDRAKEERERGVTIACTHQGVLH*PLALHHHRRPRSPRLHQEHDFRCRPGRC-------- 392
MDR KEERERGVTIACT + A H+ +P H++ G
Sbjct: 60 MDRQKEERERGVTIACTTKEFF---TATKHYTVIDAPG-HRDFIKNMITGASQADVALLM 115
Query: 393 VPADG---AR*R*LHHRHPEGRPQGR*DPGPDPPARSPDQPAGCQAADCGCEQDGLRHCR 563
VP DG A +H+ E + Q R GC DC + G R
Sbjct: 116 VPCDGNFTAAIAKGNHKAGEVQGQTRQHAVLINLLGVKQLIVGCNKMDC--DVAGYGEAR 173
Query: 564 LQEGAATMRLPTRCATCWCAWAGRTTSSTSRCPSWPISGWLGDNLITKSTNMTWYSGQEV 743
+E M + W + + P PISGW GDNLITK+TNM+W++G +
Sbjct: 174 FKEVRDEM-VHMLIKVGW-----KKSFVEESVPVLPISGWKGDNLITKTTNMSWWNGVD- 226
Query: 744 VNLKGEKIQVHTLSGRPEQL-RGRARAQDRRSPGVCPSPAPTRSRVSVMCWPAASSRAWS 920
V + E I + L E++ R RA D+ P P + + +
Sbjct: 227 VKVDSETIHIDCLQDALEKMVRVPQRATDK--PMRTPISGVFKIKGVGDVLTGRVEQGTV 284
Query: 921 SPVMR*SSCPPTPPPTPGTGKVFTVEMHHKRVDKAGPGDNVGMNIKGLDKGNMPRTGDVM 1100
P P T TGKVFTVEMHHK V+ A GDNVG+NIKGL+K NMPR GDVM
Sbjct: 285 KPGDEVVFLPTHTSSTACTGKVFTVEMHHKSVEAAMTGDNVGLNIKGLNKDNMPRVGDVM 344
Query: 1101 ILKSDQTLKIVKDFTAQIQTLDIPGEVKKGYSPIGFVRCGRSACRISGINWKVGKETGGK 1280
ILKSD ++ VK FT Q+Q ++ PGE+K GY PI FVR RSACR++ INWK+GKETGGK
Sbjct: 345 ILKSDDSIGRVKSFTVQVQIMNHPGELKVGYCPIAFVRTSRSACRMTAINWKIGKETGGK 404
Query: 1281 KMENPVGLKANEMAEVVYEPTQPLIVDSFKNCEGLSRIAFLDGNTAVMLGKVVSV 1445
K E+PV LK+NE+AEVV P QP +VD+FK CEGL R+A ++GN+ VMLGKV V
Sbjct: 405 KAEDPVALKSNEVAEVVMAPQQPFVVDTFKTCEGLGRVAIMEGNSVVMLGKVTKV 459
Score = 159 bits (402), Expect(2) = 2e-59
Identities = 77/93 (82%), Positives = 82/93 (87%)
Frame = +1
Query: 289 TKEFFTDRWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAGEI 468
TKEFFT HYT+IDAPGHRDFIKNMI+GA+QADV LLMVP DGNFT AI KG+HKAGE+
Sbjct: 77 TKEFFTATKHYTVIDAPGHRDFIKNMITGASQADVALLMVPCDGNFTAAIAKGNHKAGEV 136
Query: 469 QGQTRQHARLINLLGVKQLIVGVNKMDSDTAGY 567
QGQTRQHA LINLLGVKQLIVG NKMD D AGY
Sbjct: 137 QGQTRQHAVLINLLGVKQLIVGCNKMDCDVAGY 169
Score = 94.7 bits (234), Expect(2) = 2e-59
Identities = 55/129 (42%), Positives = 75/129 (57%), Gaps = 1/129 (0%)
Frame = +2
Query: 581 YDEIANEMRHMLVRVGWKDDFVNKSVPILAHLRLAG*QPDHQVHQH-DLVLRPGGGQPEG 757
+ E+ +EM HML++VGWK FV +SVP+L ++G + D+ + + ++ G
Sbjct: 174 FKEVRDEMVHMLIKVGWKKSFVEESVPVLP---ISGWKGDNLITKTTNMSWWNGVDVKVD 230
Query: 758 REDPGAHPVWTP*TASWSCPSARPTLPWRLPISGAYKIKGVGDVLAGRVEQGVVKPGDEV 937
E + P P R PISG +KIKGVGDVL GRVEQG VKPGDEV
Sbjct: 231 SETIHIDCLQDALEKMVRVPQRATDKPMRTPISGVFKIKGVGDVLTGRVEQGTVKPGDEV 290
Query: 938 IFLPTHTTA 964
+FLPTHT++
Sbjct: 291 VFLPTHTSS 299
>dbj|BAC67663.1| elongation factor-1alpha [Pleodorina sp. 2000-602-P14]
Length = 325
Score = 209 bits (531), Expect(2) = 1e-84
Identities = 119/187 (63%), Positives = 133/187 (70%), Gaps = 3/187 (1%)
Frame = +1
Query: 289 TKEFFTDRWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAGEI 468
TKEFFT++WHYTIIDAPGHRDF KNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAGEI
Sbjct: 77 TKEFFTEKWHYTIIDAPGHRDFFKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAGEI 136
Query: 469 QGQTRQHARLINLLGVKQLIVGVNKMDSDTAGYKKELLR*DCQRDAPHAGAR--GLEGRL 642
QGQTRQHARLINLLGVKQLIVGVNKMDSDTAGYKKE + + H R + +
Sbjct: 137 QGQTRQHARLINLLGVKQLIVGVNKMDSDTAGYKKERYD-EIANEMRHMLVRVGWKDDFV 195
Query: 643 RQQVGAHPGPSPAGWVTT*SPSPPT-*PGTPARRWST*RARRSRCTPCLDALNSFVVVPE 819
+ V P +GW+ +P T + + + + LDALNSFV VPE
Sbjct: 196 NKSVPILP---ISGWLGDNLITPSTNMTWYKGQEVVNLKNEKVKVHTLLDALNSFVTVPE 252
Query: 820 RKTDAPL 840
RKTDAPL
Sbjct: 253 RKTDAPL 259
Score = 137 bits (345), Expect = 7e-31
Identities = 77/136 (56%), Positives = 90/136 (65%), Gaps = 2/136 (1%)
Frame = +2
Query: 569 RRSCYDEIANEMRHMLVRVGWKDDFVNKSVPILAHLRLAG*QPDHQVHQHDLVLRPGGGQ 748
++ YDEIANEMRHMLVRVGWKDDFVNKSVPIL ++G D+ + + G +
Sbjct: 170 KKERYDEIANEMRHMLVRVGWKDDFVNKSVPILP---ISGWLGDNLITPSTNMTWYKGQE 226
Query: 749 PEG--REDPGAHPVWTP*TASWSCPSARPTLPWRLPISGAYKIKGVGDVLAGRVEQGVVK 922
E H + + + P + P RLPISGAYKIKGVGDVLAGRVEQGVVK
Sbjct: 227 VVNLKNEKVKVHTLLDALNSFVTVPERKTDAPLRLPISGAYKIKGVGDVLAGRVEQGVVK 286
Query: 923 PGDEVIFLPTHTTANP 970
PGDEV+FLPTHT ANP
Sbjct: 287 PGDEVVFLPTHTAANP 302
Score = 129 bits (323), Expect(2) = 1e-84
Identities = 67/77 (87%), Positives = 69/77 (89%)
Frame = +3
Query: 57 MSEGKEHLSIVICGHVDSGKSTTTGRLAVRRSAVSPERELEKLKEEAAALGKSSFAFAFY 236
MSEGKEHLSIVI GHVDSGKSTTTGRL + PERELEKLKEEA+ALGKSSFAFAFY
Sbjct: 1 MSEGKEHLSIVIYGHVDSGKSTTTGRLLFELGGI-PERELEKLKEEASALGKSSFAFAFY 59
Query: 237 MDRAKEERERGVTIACT 287
MDRAKEERERGVTIACT
Sbjct: 60 MDRAKEERERGVTIACT 76
Score = 108 bits (270), Expect = 3e-22
Identities = 63/129 (48%), Positives = 73/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 660 PSWPISGWLGDNLITKSTNMTWYSGQEVVNLKGEKIQVHTLSGRPEQLRGRARAQDRRSP 839
P PISGWLGDNLIT STNMTWY GQEVVNLK EK++VHTL + L +R++
Sbjct: 200 PILPISGWLGDNLITPSTNMTWYKGQEVVNLKNEKVKVHTLL---DALNSFVTVPERKTD 256
Query: 840 GVCPSPAPTRSRVSVMCWPAAS--SRAWSSPVMR*SSCPPTPPPTPGTGKVFTVEMHHKR 1013
P ++ + A + P P P TGKVFTVEMHHKR
Sbjct: 257 APLRLPISGAYKIKGVGDVLAGRVEQGVVKPGDEVVFLPTHTAANPCTGKVFTVEMHHKR 316
Query: 1014 VDKAGPGDN 1040
VDKAGPGDN
Sbjct: 317 VDKAGPGDN 325
>sp|P90519|EF1A_CRYPV ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) gi|1737177|gb|AAC47526.1|
elongation factor 1-alpha [Cryptosporidium parvum]
gi|32398975|emb|CAD98440.1| elongation factor 1 alpha
[Cryptosporidium parvum]
Length = 435
Score = 122 bits (307), Expect(3) = 5e-67
Identities = 87/270 (32%), Positives = 130/270 (47%)
Frame = +3
Query: 645 STSRCPSWPISGWLGDNLITKSTNMTWYSGQEVVNLKGEKIQVHTLSGRPEQLRGRARAQ 824
+T + P ISG++GDN++ +S M WY G+ +V E + RP R Q
Sbjct: 180 NTEKIPFVAISGFVGDNMVERSDKMPWYKGKTLV----EALDTMEPPKRPTDKPLRLPLQ 235
Query: 825 DRRSPGVCPSPAPTRSRVSVMCWPAASSRAWSSPVMR*SSCPPTPPPTPGTGKVFTVEMH 1004
D G + R ++ P M T P T +V +VEMH
Sbjct: 236 DVYKIGGVGTVPVGRVETGII-----------RPGMN-----VTFAPAGVTTEVKSVEMH 279
Query: 1005 HKRVDKAGPGDNVGMNIKGLDKGNMPRTGDVMILKSDQTLKIVKDFTAQIQTLDIPGEVK 1184
H+++ +A PGDNVG N+K + ++ R K+D K +DFTAQ+ L+ PGE+K
Sbjct: 280 HEQMPEAVPGDNVGFNVKNVSIKDIKRGFVASDAKNDPA-KGCEDFTAQVIVLNHPGEIK 338
Query: 1185 KGYSPIGFVRCGRSACRISGINWKVGKETGGKKMENPVGLKANEMAEVVYEPTQPLIVDS 1364
GYSP+ +C+ I K+ K +G ENP +K+ + A VV +P +PL V++
Sbjct: 339 NGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEA 398
Query: 1365 FKNCEGLSRIAFLDGNTAVMLGKVVSVTHK 1454
F + L R A D V +G + SVT K
Sbjct: 399 FTDYPPLGRFAVRDMKQTVAVGVIKSVTKK 428
Score = 100 bits (249), Expect(3) = 5e-67
Identities = 54/93 (58%), Positives = 67/93 (71%)
Frame = +1
Query: 295 EFFTDRWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAGEIQG 474
+F T ++HYT+IDAPGHRDFIKNMI+G +QADV LL+VPAD F A K +G
Sbjct: 79 QFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLVVPAD-RFEGAFSK--------EG 129
Query: 475 QTRQHARLINLLGVKQLIVGVNKMDSDTAGYKK 573
QTR+HA L LGV+Q+IVG+NKM DT YK+
Sbjct: 130 QTREHALLAFTLGVRQMIVGINKM--DTCEYKQ 160
Score = 77.4 bits (189), Expect(3) = 5e-67
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = +3
Query: 57 MSEGKEHLSIVICGHVDSGKSTTTGRLAVRRSAVSPERELEKLKEEAAALGKSSFAFAFY 236
M + K H+++V+ GHVDSGKSTTTG L + + +R +EK ++E++ +GK SF +A+
Sbjct: 1 MGKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGID-KRTIEKFEKESSEMGKGSFKYAWV 59
Query: 237 MDRAKEERERGVTI 278
+D+ K ERERG+TI
Sbjct: 60 LDKLKAERERGITI 73
Score = 53.1 bits (126), Expect = 2e-05
Identities = 43/132 (32%), Positives = 61/132 (45%), Gaps = 1/132 (0%)
Frame = +2
Query: 569 RRSCYDEIANEMRHMLVRVGWKDDFVNKSVPILAHLRLAG*QPDHQVHQHDLVLRPGGGQ 748
++S +DEI NE+ L +VG+ + +P +A ++G D+ V + D + G
Sbjct: 159 KQSRFDEIFNEVDGYLKKVGYN----TEKIPFVA---ISGFVGDNMVERSDKMPWYKGKT 211
Query: 749 PEGREDPGAHPVWTP*TASWSCPSARPT-LPWRLPISGAYKIKGVGDVLAGRVEQGVVKP 925
D P RPT P RLP+ YKI GVG V GRVE G+++P
Sbjct: 212 LVEALDTME-------------PPKRPTDKPLRLPLQDVYKIGGVGTVPVGRVETGIIRP 258
Query: 926 GDEVIFLPTHTT 961
G V F P T
Sbjct: 259 GMNVTFAPAGVT 270
>pir||S54734 translation elongation factor aEF-1 alpha chain - Desulfurococcus
mobilis
Length = 441
Score = 121 bits (304), Expect(3) = 2e-63
Identities = 79/265 (29%), Positives = 127/265 (47%)
Frame = +3
Query: 651 SRCPSWPISGWLGDNLITKSTNMTWYSGQEVVNLKGEKIQVHTLSGRPEQLRGRARAQDR 830
S+ P PIS W G+NLI +S NM WY+G +V + TL P+ + R +
Sbjct: 190 SKIPFIPISAWTGENLIERSPNMPWYNGPTLVEA------LDTLEVPPKPINKPLRIPIQ 243
Query: 831 RSPGVCPSPAPTRSRVSVMCWPAASSRAWSSPVMR*SSCPPTPPPTPGTGKVFTVEMHHK 1010
+ RV + P +V T+E HH
Sbjct: 244 DVYNISGIGVVPVGRVETGVLKVGDKLVFM--------------PAGLVAEVKTIETHHT 289
Query: 1011 RVDKAGPGDNVGMNIKGLDKGNMPRTGDVMILKSDQTLKIVKDFTAQIQTLDIPGEVKKG 1190
+++KA PGDN+G N+KG++K ++ R GDV D + +FTA+I + P + G
Sbjct: 290 KIEKAEPGDNIGFNVKGVEKKDIKR-GDVAG-SLDVPPTVADEFTARIMVMWHPTAIAVG 347
Query: 1191 YSPIGFVRCGRSACRISGINWKVGKETGGKKMENPVGLKANEMAEVVYEPTQPLIVDSFK 1370
Y+P+ V ACRI+ I K+ TG + +NP LK ++A V ++P +PL+V+ +
Sbjct: 348 YTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYS 407
Query: 1371 NCEGLSRIAFLDGNTAVMLGKVVSV 1445
+ +GL R A D + +G+V+ +
Sbjct: 408 DFQGLGRFAMRDMGKTIGIGQVLEI 432
Score = 91.3 bits (225), Expect(3) = 2e-63
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 EFFTDRWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAG-EIQ 471
+F T ++ +TIIDAPGHRDF+KNMI+GA+QAD +L+V A +KG+ +AG +
Sbjct: 83 KFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSA--------RKGEFEAGMSAE 134
Query: 472 GQTRQHARLINLLGVKQLIVGVNKMDSDTAGYKKE 576
GQTR+HA L +G+ QLIV +NKMD+ Y ++
Sbjct: 135 GQTREHAILARTMGINQLIVAINKMDATEPPYSEK 169
Score = 75.5 bits (184), Expect(3) = 2e-63
Identities = 38/74 (51%), Positives = 52/74 (69%)
Frame = +3
Query: 69 KEHLSIVICGHVDSGKSTTTGRLAVRRSAVSPERELEKLKEEAAALGKSSFAFAFYMDRA 248
K HL+IVI GHVD GKST TG + R E+ ++ ++EE+ +GK SF FA+ +DR
Sbjct: 9 KPHLNIVIIGHVDHGKSTMTGHILYRLGYFD-EKTVKMIEEESKKMGKESFKFAWLLDRM 67
Query: 249 KEERERGVTIACTH 290
KEERERGVTI+ ++
Sbjct: 68 KEERERGVTISLSY 81
Score = 47.8 bits (112), Expect = 7e-04
Identities = 21/43 (48%), Positives = 28/43 (64%)
Frame = +2
Query: 836 PWRLPISGAYKIKGVGDVLAGRVEQGVVKPGDEVIFLPTHTTA 964
P R+PI Y I G+G V GRVE GV+K GD+++F+P A
Sbjct: 237 PLRIPIQDVYNISGIGVVPVGRVETGVLKVGDKLVFMPAGLVA 279
>sp|P41203|EF1A_DESMO Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
gi|581023|emb|CAA51984.1| elongation factor 1-alpha
[Desulfurococcus mobilis]
Length = 438
Score = 121 bits (304), Expect(3) = 2e-63
Identities = 79/265 (29%), Positives = 127/265 (47%)
Frame = +3
Query: 651 SRCPSWPISGWLGDNLITKSTNMTWYSGQEVVNLKGEKIQVHTLSGRPEQLRGRARAQDR 830
S+ P PIS W G+NLI +S NM WY+G +V + TL P+ + R +
Sbjct: 187 SKIPFIPISAWTGENLIERSPNMPWYNGPTLVEA------LDTLEVPPKPINKPLRIPIQ 240
Query: 831 RSPGVCPSPAPTRSRVSVMCWPAASSRAWSSPVMR*SSCPPTPPPTPGTGKVFTVEMHHK 1010
+ RV + P +V T+E HH
Sbjct: 241 DVYNISGIGVVPVGRVETGVLKVGDKLVFM--------------PAGLVAEVKTIETHHT 286
Query: 1011 RVDKAGPGDNVGMNIKGLDKGNMPRTGDVMILKSDQTLKIVKDFTAQIQTLDIPGEVKKG 1190
+++KA PGDN+G N+KG++K ++ R GDV D + +FTA+I + P + G
Sbjct: 287 KIEKAEPGDNIGFNVKGVEKKDIKR-GDVAG-SLDVPPTVADEFTARIMVMWHPTAIAVG 344
Query: 1191 YSPIGFVRCGRSACRISGINWKVGKETGGKKMENPVGLKANEMAEVVYEPTQPLIVDSFK 1370
Y+P+ V ACRI+ I K+ TG + +NP LK ++A V ++P +PL+V+ +
Sbjct: 345 YTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYS 404
Query: 1371 NCEGLSRIAFLDGNTAVMLGKVVSV 1445
+ +GL R A D + +G+V+ +
Sbjct: 405 DFQGLGRFAMRDMGKTIGIGQVLEI 429
Score = 91.3 bits (225), Expect(3) = 2e-63
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 EFFTDRWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADGNFTTAIQKGDHKAG-EIQ 471
+F T ++ +TIIDAPGHRDF+KNMI+GA+QAD +L+V A +KG+ +AG +
Sbjct: 80 KFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSA--------RKGEFEAGMSAE 131
Query: 472 GQTRQHARLINLLGVKQLIVGVNKMDSDTAGYKKE 576
GQTR+HA L +G+ QLIV +NKMD+ Y ++
Sbjct: 132 GQTREHAILARTMGINQLIVAINKMDATEPPYSEK 166
Score = 75.5 bits (184), Expect(3) = 2e-63
Identities = 38/74 (51%), Positives = 52/74 (69%)
Frame = +3
Query: 69 KEHLSIVICGHVDSGKSTTTGRLAVRRSAVSPERELEKLKEEAAALGKSSFAFAFYMDRA 248
K HL+IVI GHVD GKST TG + R E+ ++ ++EE+ +GK SF FA+ +DR
Sbjct: 6 KPHLNIVIIGHVDHGKSTMTGHILYRLGYFD-EKTVKMIEEESKKMGKESFKFAWLLDRM 64
Query: 249 KEERERGVTIACTH 290
KEERERGVTI+ ++
Sbjct: 65 KEERERGVTISLSY 78
Score = 47.8 bits (112), Expect = 7e-04
Identities = 21/43 (48%), Positives = 28/43 (64%)
Frame = +2
Query: 836 PWRLPISGAYKIKGVGDVLAGRVEQGVVKPGDEVIFLPTHTTA 964
P R+PI Y I G+G V GRVE GV+K GD+++F+P A
Sbjct: 234 PLRIPIQDVYNISGIGVVPVGRVETGVLKVGDKLVFMPAGLVA 276
