Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000050A_C01 KCC000050A_c01
(776 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC09501.1| putative 60s Ribosomal protein L25 [Oryza sativa... 214 1e-54
emb|CAE01636.1| OSJNBa0029H02.21 [Oryza sativa (japonica cultiva... 214 1e-54
sp|Q07761|RL2B_TOBAC 60S RIBOSOMAL PROTEIN L23A (L25) gi|1084424... 213 4e-54
dbj|BAB63895.1| putative 60S ribosomal protein L23A [Oryza sativ... 207 2e-52
gb|AAK30202.1|AF349961_1 ribosome protein L23a [Daucus carota] 206 4e-52
>emb|CAC09501.1| putative 60s Ribosomal protein L25 [Oryza sativa (indica
cultivar-group)]
Length = 152
Score = 214 bits (545), Expect = 1e-54
Identities = 110/147 (74%), Positives = 125/147 (84%), Gaps = 1/147 (0%)
Frame = +2
Query: 23 APKGKADAKAVAAKAAKAVKKGSFKKS-RKPRFSVVFHRPKTLQRTREGKYPKISTPSLQ 199
AP K DAKA A KAAKAVK G+ KK+ +K R SV FHRPKTL+++R+ KYP++STP
Sbjct: 6 APAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRN 65
Query: 200 KLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSRMYDVQTKKVNTLIR 379
KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV +MYD+Q KKVNTLIR
Sbjct: 66 KLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIR 125
Query: 380 PDGQKKAYVCLTADYDALDVANKIGII 460
PDG+KKAYV LT DYDALDVANKIGII
Sbjct: 126 PDGKKKAYVKLTPDYDALDVANKIGII 152
Score = 103 bits (258), Expect = 2e-21
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = -2
Query: 715 TREGKYPKISTPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVS 536
+R+ KYP++STP KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV
Sbjct: 51 SRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVK 110
Query: 535 RMYDFQ 518
+MYD Q
Sbjct: 111 KMYDIQ 116
>emb|CAE01636.1| OSJNBa0029H02.21 [Oryza sativa (japonica cultivar-group)]
Length = 192
Score = 214 bits (545), Expect = 1e-54
Identities = 110/147 (74%), Positives = 125/147 (84%), Gaps = 1/147 (0%)
Frame = +2
Query: 23 APKGKADAKAVAAKAAKAVKKGSFKKS-RKPRFSVVFHRPKTLQRTREGKYPKISTPSLQ 199
AP K DAKA A KAAKAVK G+ KK+ +K R SV FHRPKTL+++R+ KYP++STP
Sbjct: 46 APAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRN 105
Query: 200 KLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSRMYDVQTKKVNTLIR 379
KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV +MYD+Q KKVNTLIR
Sbjct: 106 KLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIR 165
Query: 380 PDGQKKAYVCLTADYDALDVANKIGII 460
PDG+KKAYV LT DYDALDVANKIGII
Sbjct: 166 PDGKKKAYVKLTPDYDALDVANKIGII 192
Score = 103 bits (258), Expect = 2e-21
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = -2
Query: 715 TREGKYPKISTPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVS 536
+R+ KYP++STP KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV
Sbjct: 91 SRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVK 150
Query: 535 RMYDFQ 518
+MYD Q
Sbjct: 151 KMYDIQ 156
>sp|Q07761|RL2B_TOBAC 60S RIBOSOMAL PROTEIN L23A (L25) gi|1084424|pir||S48026 ribosomal
protein L23a, cytosolic - common tobacco
gi|310935|gb|AAA53296.1| 60S ribosomal protein L25
Length = 154
Score = 213 bits (541), Expect = 4e-54
Identities = 110/147 (74%), Positives = 121/147 (81%), Gaps = 2/147 (1%)
Frame = +2
Query: 26 PKGKADAKAVAAKAAKAVKKGSF--KKSRKPRFSVVFHRPKTLQRTREGKYPKISTPSLQ 199
P K+D KA AAK AKAVK GS KKS+K R V FHRPKTL++ R KYP+IS P
Sbjct: 8 PSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPRISAPGRN 67
Query: 200 KLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSRMYDVQTKKVNTLIR 379
KLDQY +LK+PLTTESAMKKIEDNNTLVFIVD+KA KK+IKDAV +MYD+QTKKVNTLIR
Sbjct: 68 KLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIR 127
Query: 380 PDGQKKAYVCLTADYDALDVANKIGII 460
PDG KKAYV LT DYDALDVANKIGII
Sbjct: 128 PDGTKKAYVRLTPDYDALDVANKIGII 154
Score = 103 bits (258), Expect = 2e-21
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = -2
Query: 712 REGKYPKISTPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSR 533
R KYP+IS P KLDQY +LK+PLTTESAMKKIEDNNTLVFIVD+KA KK+IKDAV +
Sbjct: 54 RNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKK 113
Query: 532 MYDFQ 518
MYD Q
Sbjct: 114 MYDIQ 118
>dbj|BAB63895.1| putative 60S ribosomal protein L23A [Oryza sativa (japonica
cultivar-group)] gi|21104815|dbj|BAB93400.1| putative
60S ribosomal protein L23A [Oryza sativa (japonica
cultivar-group)]
Length = 152
Score = 207 bits (526), Expect = 2e-52
Identities = 111/152 (73%), Positives = 123/152 (80%), Gaps = 5/152 (3%)
Frame = +2
Query: 20 MAPKG---KADAKAVAA-KAAKAVKKGSFK-KSRKPRFSVVFHRPKTLQRTREGKYPKIS 184
MAPK KAD K A K AKAVK GS K KS+K R SV FHRPKTL++ R+ KYP++S
Sbjct: 1 MAPKAAVKKADGKTQQALKVAKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVS 60
Query: 185 TPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSRMYDVQTKKV 364
P KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV +MYD+Q KKV
Sbjct: 61 APGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKV 120
Query: 365 NTLIRPDGQKKAYVCLTADYDALDVANKIGII 460
NTLIRPDG+KKAYV LT DYDALDVANKIGII
Sbjct: 121 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152
Score = 101 bits (252), Expect = 1e-20
Identities = 48/65 (73%), Positives = 55/65 (83%)
Frame = -2
Query: 712 REGKYPKISTPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSR 533
R+ KYP++S P KLDQY +LK+PLTTESAMKKIEDNNTLVFIVDLKA KK+IK AV +
Sbjct: 52 RDPKYPRVSAPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKK 111
Query: 532 MYDFQ 518
MYD Q
Sbjct: 112 MYDIQ 116
>gb|AAK30202.1|AF349961_1 ribosome protein L23a [Daucus carota]
Length = 154
Score = 206 bits (523), Expect = 4e-52
Identities = 106/144 (73%), Positives = 120/144 (82%), Gaps = 2/144 (1%)
Frame = +2
Query: 35 KADAKAVAAKAAKAVKKGS--FKKSRKPRFSVVFHRPKTLQRTREGKYPKISTPSLQKLD 208
K+DAKA A K AKAVK G+ FKK +K R SV FHRP+TL + R KYP+IS KLD
Sbjct: 11 KSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLD 70
Query: 209 QYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSRMYDVQTKKVNTLIRPDG 388
QY +LK+PLTTESAMKKIEDNNTLVFIVD++A+KK+IKDAV +MYD+QTKKVNTLIRPDG
Sbjct: 71 QYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDG 130
Query: 389 QKKAYVCLTADYDALDVANKIGII 460
KKAYV LT DYDALDVANKIGII
Sbjct: 131 TKKAYVRLTPDYDALDVANKIGII 154
Score = 99.4 bits (246), Expect = 6e-20
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = -2
Query: 712 REGKYPKISTPSLQKLDQYAVLKFPLTTESAMKKIEDNNTLVFIVDLKASKKQIKDAVSR 533
R KYP+IS KLDQY +LK+PLTTESAMKKIEDNNTLVFIVD++A+KK+IKDAV +
Sbjct: 54 RNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKK 113
Query: 532 MYDFQ 518
MYD Q
Sbjct: 114 MYDIQ 118
