Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000045A_C01 KCC000045A_c01
(514 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566912.1| ATP-dependent Clp protease ATP-binding subunit ... 114 8e-35
pir||T52456 endopeptidase Clp ATP-binding chain C [imported] - A... 114 8e-35
gb|AAL10478.1| AT3g48870/T21J18_140 [Arabidopsis thaliana] 114 8e-35
sp|P35100|CLPA_PEA ATP-dependent clp protease ATP-binding subuni... 117 9e-26
ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia th... 116 2e-25
>ref|NP_566912.1| ATP-dependent Clp protease ATP-binding subunit (ClpC2) [Arabidopsis
thaliana] gi|11265212|pir||T49283 AtClpC - Arabidopsis
thaliana gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis
thaliana]
Length = 952
Score = 114 bits (285), Expect(2) = 8e-35
Identities = 56/61 (91%), Positives = 59/61 (95%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFT 510
RLGHNFVGTEQ+LLGLIGE TGI AKVLKSMG+NLKD+RVEVEKIIGRGSGFVAVEIPFT
Sbjct: 135 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFT 194
Query: 511 P 513
P
Sbjct: 195 P 195
Score = 54.3 bits (129), Expect(2) = 8e-35
Identities = 31/60 (51%), Positives = 39/60 (64%), Gaps = 2/60 (3%)
Frame = +3
Query: 180 FLGQRVAGRMAVAPAARKAGR--AGRLVVKSMFERFTEKAIKVVMLAQEEARPAGTQLRG 353
+LG+ G + A+ +GR A R V K+MFERFTEKAIKV+ML+QEEAR G G
Sbjct: 83 YLGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVG 142
Score = 50.8 bits (120), Expect = 1e-05
Identities = 21/54 (38%), Positives = 38/54 (69%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVA 492
+LGHN++G+E LLLGL+ E G+ A+VL+++G + + R +V +++G + A
Sbjct: 210 QLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTA 263
>pir||T52456 endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis
thaliana gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis
thaliana]
Length = 952
Score = 114 bits (285), Expect(2) = 8e-35
Identities = 56/61 (91%), Positives = 59/61 (95%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFT 510
RLGHNFVGTEQ+LLGLIGE TGI AKVLKSMG+NLKD+RVEVEKIIGRGSGFVAVEIPFT
Sbjct: 135 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFT 194
Query: 511 P 513
P
Sbjct: 195 P 195
Score = 54.3 bits (129), Expect(2) = 8e-35
Identities = 31/60 (51%), Positives = 39/60 (64%), Gaps = 2/60 (3%)
Frame = +3
Query: 180 FLGQRVAGRMAVAPAARKAGR--AGRLVVKSMFERFTEKAIKVVMLAQEEARPAGTQLRG 353
+LG+ G + A+ +GR A R V K+MFERFTEKAIKV+ML+QEEAR G G
Sbjct: 83 YLGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVG 142
Score = 50.8 bits (120), Expect = 1e-05
Identities = 21/54 (38%), Positives = 38/54 (69%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVA 492
+LGHN++G+E LLLGL+ E G+ A+VL+++G + + R +V +++G + A
Sbjct: 210 QLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTA 263
>gb|AAL10478.1| AT3g48870/T21J18_140 [Arabidopsis thaliana]
Length = 558
Score = 114 bits (285), Expect(2) = 8e-35
Identities = 56/61 (91%), Positives = 59/61 (95%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFT 510
RLGHNFVGTEQ+LLGLIGE TGI AKVLKSMG+NLKD+RVEVEKIIGRGSGFVAVEIPFT
Sbjct: 135 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFT 194
Query: 511 P 513
P
Sbjct: 195 P 195
Score = 54.3 bits (129), Expect(2) = 8e-35
Identities = 31/60 (51%), Positives = 39/60 (64%), Gaps = 2/60 (3%)
Frame = +3
Query: 180 FLGQRVAGRMAVAPAARKAGR--AGRLVVKSMFERFTEKAIKVVMLAQEEARPAGTQLRG 353
+LG+ G + A+ +GR A R V K+MFERFTEKAIKV+ML+QEEAR G G
Sbjct: 83 YLGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVG 142
Score = 50.8 bits (120), Expect = 1e-05
Identities = 21/54 (38%), Positives = 38/54 (69%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVA 492
+LGHN++G+E LLLGL+ E G+ A+VL+++G + + R +V +++G + A
Sbjct: 210 QLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTA 263
>sp|P35100|CLPA_PEA ATP-dependent clp protease ATP-binding subunit clpA homolog,
chloroplast precursor gi|419773|pir||S31164
endopeptidase Clp (EC 3.4.21.-) ATP-binding chain,
chloroplast [similarity] - garden pea
gi|169128|gb|AAA33680.1| nuclear encoded precursor to
chloroplast protein
Length = 922
Score = 117 bits (293), Expect = 9e-26
Identities = 65/100 (65%), Positives = 72/100 (72%)
Frame = +1
Query: 214 SRRPPARLAVPAGWW*RACSSASRRRPSRWSCLLRRRLDRLGHNFVGTEQLLLGLIGEST 393
SRR A+ +P RA + + L + RLGHNFVGTEQ+LLGLIGE T
Sbjct: 78 SRRARAKRFIP-----RAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGT 132
Query: 394 GIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFTP 513
GI AKVLKSMG+NLKDARVEVEKIIGRGSGFVAVEIPFTP
Sbjct: 133 GIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTP 172
Score = 51.2 bits (121), Expect = 8e-06
Identities = 21/57 (36%), Positives = 39/57 (67%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEI 501
+LGHN++G+E LLLGL+ E G+ A+VL+++G + + R +V +++G + V +
Sbjct: 187 QLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATV 243
>ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia theta]
gi|5921798|sp|O78410|CLPC_GUITH ATP-dependent clp
protease ATP-binding subunit clpA homolog
gi|3602934|gb|AAC35595.1| Clp protease ATP binding
subunit [Guillardia theta]
Length = 819
Score = 116 bits (290), Expect = 2e-25
Identities = 59/68 (86%), Positives = 61/68 (88%)
Frame = +1
Query: 310 LLRRRLDRLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIGRGSGFV 489
L + RLGHNFVGTEQ+LLGLIGE TGI AKVLKSMGVNLKDARVEVEKIIGRGSGFV
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 490 AVEIPFTP 513
AVEIPFTP
Sbjct: 75 AVEIPFTP 82
Score = 52.4 bits (124), Expect = 3e-06
Identities = 22/47 (46%), Positives = 36/47 (75%)
Frame = +1
Query: 331 RLGHNFVGTEQLLLGLIGESTGIDAKVLKSMGVNLKDARVEVEKIIG 471
+LGHN++GTE LLLGLI E G+ A+VL+++ ++L R +V +++G
Sbjct: 97 QLGHNYIGTEHLLLGLIREGEGVAARVLENLALDLTKVRTQVIRLLG 143
Score = 44.3 bits (103), Expect = 0.001
Identities = 22/29 (75%), Positives = 23/29 (78%)
Frame = +3
Query: 267 MFERFTEKAIKVVMLAQEEARPAGTQLRG 353
MFERFTEKAIKV+MLAQEEAR G G
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVG 29
