Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000034A_C01 KCC000034A_c01
(581 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P50884|RL12_CHLRE 60S RIBOSOMAL PROTEIN L12 gi|7440807|pir||T... 304 7e-82
emb|CAE03942.1| OSJNBa0093F12.16 [Oryza sativa (japonica cultiva... 261 4e-69
ref|NP_181256.1| 60S ribosomal protein L12 (RPL12A) [Arabidopsis... 257 7e-68
sp|O50003|RL12_PRUAR 60S RIBOSOMAL PROTEIN L12 gi|2677830|gb|AAB... 255 3e-67
ref|NP_190911.1| 60S ribosomal protein L12 (RPL12B) [Arabidopsis... 255 3e-67
>sp|P50884|RL12_CHLRE 60S RIBOSOMAL PROTEIN L12 gi|7440807|pir||T08157 ribosomal protein
L12 - Chlamydomonas reinhardtii (fragment)
gi|1167828|emb|CAA64626.1| 60S ribosomal protein L12
[Chlamydomonas reinhardtii]
Length = 157
Score = 304 bits (778), Expect = 7e-82
Identities = 156/157 (99%), Positives = 156/157 (99%)
Frame = +3
Query: 33 VVEVCVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 212
VVEVCVRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ
Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60
Query: 213 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 392
AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG
Sbjct: 61 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 120
Query: 393 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 503
CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA
Sbjct: 121 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 157
>emb|CAE03942.1| OSJNBa0093F12.16 [Oryza sativa (japonica cultivar-group)]
Length = 166
Score = 261 bits (668), Expect = 4e-69
Identities = 129/166 (77%), Positives = 146/166 (87%)
Frame = +3
Query: 6 MPPKFDPSDVVEVCVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRIT 185
MPPK DP+ VV+V VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+T
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 186 VKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPR 365
VKLTVQNRQAK+SV+PSAAALVIKALKEP RDRKK KNIKH+G++++ D+IEIAR+MR R
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMRNR 120
Query: 366 SCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 503
S AK++A KEILGT VSVGC VDGKDP+D+ I DG +EIP A
Sbjct: 121 SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEIPSA 166
>ref|NP_181256.1| 60S ribosomal protein L12 (RPL12A) [Arabidopsis thaliana]
gi|19884128|sp|P50883|RL12_ARATH 60S ribosomal protein
L12 gi|25295163|pir||F84789 60S ribosomal protein L12
[imported] - Arabidopsis thaliana
gi|4371282|gb|AAD18140.1| 60S ribosomal protein L12
[Arabidopsis thaliana]
gi|13926286|gb|AAK49612.1|AF372896_1 At2g37190/T2N18.5
[Arabidopsis thaliana] gi|21592414|gb|AAM64365.1| 60S
ribosomal protein L12 [Arabidopsis thaliana]
gi|27363340|gb|AAO11589.1| At2g37190/T2N18.5
[Arabidopsis thaliana]
Length = 166
Score = 257 bits (657), Expect = 7e-68
Identities = 124/165 (75%), Positives = 144/165 (87%)
Frame = +3
Query: 6 MPPKFDPSDVVEVCVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRIT 185
MPPK DPS +V+V VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKET K+WKGLR+T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 186 VKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPR 365
VKLTVQNRQAK++V+PSAAALVIKALKEP RDRKK KNIKH G+++ D+ EIAR+MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 366 SCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPD 500
S AK+L+ +EILGT VSVGC VDGKDP+D+ I DG +EIP+
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPE 165
>sp|O50003|RL12_PRUAR 60S RIBOSOMAL PROTEIN L12 gi|2677830|gb|AAB97143.1| ribosomal
protein L12 [Prunus armeniaca]
Length = 166
Score = 255 bits (652), Expect = 3e-67
Identities = 127/164 (77%), Positives = 143/164 (86%)
Frame = +3
Query: 6 MPPKFDPSDVVEVCVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRIT 185
MPPKFDPS VV+V VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKET DWKGLR+T
Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60
Query: 186 VKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPR 365
VKLTVQNRQAK+SV+PSAAALVIKALKEP RDRKK KNIKH+G +++ D+IEIA++M+ R
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120
Query: 366 SCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIP 497
S AK+LA KEIL T VSVGC VDGKDP+D+ I DG +EIP
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIP 164
>ref|NP_190911.1| 60S ribosomal protein L12 (RPL12B) [Arabidopsis thaliana]
gi|11276750|pir||T45883 60S RIBOSOMAL PROTEIN L12-like -
Arabidopsis thaliana gi|6729494|emb|CAB67650.1| 60S
RIBOSOMAL PROTEIN L12-like [Arabidopsis thaliana]
gi|22655306|gb|AAM98243.1| 60S ribosomal protein
L12-like protein [Arabidopsis thaliana]
gi|27311969|gb|AAO00950.1| 60S ribosomal protein
L12-like protein [Arabidopsis thaliana]
Length = 166
Score = 255 bits (652), Expect = 3e-67
Identities = 124/165 (75%), Positives = 144/165 (87%)
Frame = +3
Query: 6 MPPKFDPSDVVEVCVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRIT 185
MPPK DPS +V+V VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKET K+WKGLR+T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 186 VKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPR 365
VKLTVQNRQAK++V+PSAAALVIKALKEP RDRKK KNIKH G+++ D+ EIAR+MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 366 SCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPD 500
S AK+L+ +EILGT VSVGC VDGKDP+D+ I +G IEIP+
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPE 165
