Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000033A_C01 KCC000033A_c01
(509 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00051079.1| COG1132: ABC-type multidrug transport system,... 41 0.010
ref|ZP_00057851.1| COG0596: Predicted hydrolases or acyltransfer... 40 0.013
ref|ZP_00138924.1| COG1629: Outer membrane receptor proteins, mo... 39 0.049
ref|ZP_00059221.1| COG0765: ABC-type amino acid transport system... 38 0.065
ref|NP_823720.1| hypothetical protein [Streptomyces avermitilis ... 38 0.065
>ref|ZP_00051079.1| COG1132: ABC-type multidrug transport system, ATPase and permease
components [Magnetospirillum magnetotacticum]
Length = 423
Score = 40.8 bits (94), Expect = 0.010
Identities = 18/34 (52%), Positives = 20/34 (57%)
Frame = -3
Query: 426 RGTGRARRPHTRAPHSSGRGPPRPRHRHGAPRQP 325
RG+ RAR P H SGR PP RHR G+P P
Sbjct: 8 RGSPRARSPAPARRHRSGRSPPTARHREGSPAPP 41
>ref|ZP_00057851.1| COG0596: Predicted hydrolases or acyltransferases (alpha/beta
hydrolase superfamily) [Thermobifida fusca]
Length = 529
Score = 40.4 bits (93), Expect = 0.013
Identities = 31/67 (46%), Positives = 35/67 (51%), Gaps = 3/67 (4%)
Frame = -3
Query: 492 VPGKRPAARRRPRMPAAGSAAWRGTGRARRPHTRAPHSSGRGPPRPRHRHGAPRQP---S 322
+PG P R R R+ +AGSA + GR RR H R H R PRHRH A RQP
Sbjct: 11 LPGAEPPQRGRSRLRSAGSAG-QHPGRRRRHHPRRGHRRLR-HRFPRHRH-ADRQPYLRR 67
Query: 321 AGTPCRR 301
GT RR
Sbjct: 68 RGTIARR 74
>ref|ZP_00138924.1| COG1629: Outer membrane receptor proteins, mostly Fe transport
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 1175
Score = 38.5 bits (88), Expect = 0.049
Identities = 30/76 (39%), Positives = 32/76 (41%), Gaps = 13/76 (17%)
Frame = +2
Query: 314 VPAEGCRGAPWRWRGRG-GPRPLLCGARVCG--------RLARPVPRQAADPAAG----I 454
VP EGCR WR R GPR G R CG R A VPRQAA G +
Sbjct: 167 VPGEGCRTCAAGWRQRAPGPRRPAPGTRPCGAGAGRQLARWATGVPRQAAGRTGGGTVAL 226
Query: 455 RGRRRAAGRLPGTKAA 502
R GR P + A
Sbjct: 227 SCRADPPGRSPACRQA 242
>ref|ZP_00059221.1| COG0765: ABC-type amino acid transport system, permease component
[Thermobifida fusca]
Length = 327
Score = 38.1 bits (87), Expect = 0.065
Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -3
Query: 468 RRRP---RMPAAGSAAWRGTGRARRPHTRAPH--SSGRGPPRPRHRHGAPRQPSAGTPCR 304
R+RP R AAG G G RRPH PH ++ RG P G PRQP+AGT R
Sbjct: 40 RQRPDPGRPRAAGLHRGDGRGLHRRPHRLLPHRPAADRGNAAP----GTPRQPAAGTARR 95
>ref|NP_823720.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29606192|dbj|BAC70255.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 810
Score = 38.1 bits (87), Expect = 0.065
Identities = 26/69 (37%), Positives = 30/69 (42%), Gaps = 11/69 (15%)
Frame = -3
Query: 489 PGKRPAARRRPRMPAAGSAAWRGTGR-----------ARRPHTRAPHSSGRGPPRPRHRH 343
P +RP RPR P + S + R + R RRPH R P R PR R
Sbjct: 81 PSRRPRRASRPRRPGSRSRSPRSSRRHRSRHPRPGTSLRRPHPRIPCPRRRPTPRARVT- 139
Query: 342 GAPRQPSAG 316
GAP P AG
Sbjct: 140 GAPAAPQAG 148
Score = 33.1 bits (74), Expect = 2.1
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 489 PGKRPAARRRPRMPAAGSAAWRGTGRARRP-HTRAPHSSGRGPPRPRHRHGAPRQPSA 319
P RP RRP P S A R R + P ++A S R P R R PR+P +
Sbjct: 39 PISRPRPHRRPSGPRLRSRASRRAPRPQPPLPSKASRSRSRSPSRRPRRASRPRRPGS 96
