Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000030A_C01 KCC000030A_c01
(771 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05511.1| OSJNBa0038P21.4 [Oryza sativa (japonica cultivar... 271 1e-71
sp|P49199|RS8_ORYSA 40S RIBOSOMAL PROTEIN S8 gi|7440236|pir||T04... 268 7e-71
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 gi|7440237|pir||T04... 268 9e-71
ref|NP_200732.2| 40S ribosomal protein S8 (RPS8B) [Arabidopsis t... 267 1e-70
ref|NP_197529.1| 40S ribosomal protein S8 (RPS8A) [Arabidopsis t... 267 1e-70
>emb|CAE05511.1| OSJNBa0038P21.4 [Oryza sativa (japonica cultivar-group)]
Length = 221
Score = 271 bits (692), Expect = 1e-71
Identities = 142/220 (64%), Positives = 165/220 (74%), Gaps = 11/220 (5%)
Frame = +1
Query: 22 MGISRDSLHKRRATGGRKEALAQEEEV*DGPCAG*HQAEQPSVAVRTVRVRGGHTKFRAL 201
MGISRDS+HKRRATGG+++A ++ + G + + VR VRVRGG+ K+RAL
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPA-NTKLSSNKTVRRVRVRGGNLKWRAL 59
Query: 202 RLDTGNYSWGSEAVTRKVRILDVVYNASNNELVRTQTLVKNAIVQVDATPFKQWYQKHYN 381
RLDTGNYSWGSEAVTRK RILDVVYNASNNELVRTQTLVK+AIVQVDA PFKQWY HY
Sbjct: 60 RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYG 119
Query: 382 VELGAKNQAEIVPK-----------PEEIKGSNHVKRKIKERLQKRKLDSHLAEQFSTGR 528
V++G K +A K EE K SNHV RK+++R Q R LDSH+ EQF +GR
Sbjct: 120 VDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDSHIEEQFGSGR 179
Query: 529 LFACISSRPGQCGRCDGYILEGKELEFYVKKMQKKKSKAA 648
L ACISSRPGQCGR DGYILEGKELEFY+KK+Q+KK K A
Sbjct: 180 LLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
>sp|P49199|RS8_ORYSA 40S RIBOSOMAL PROTEIN S8 gi|7440236|pir||T04082 probable ribosomal
protein S8 - rice gi|968902|dbj|BAA07207.1| ribosomal
protein S8 [Oryza sativa (japonica cultivar-group)]
Length = 220
Score = 268 bits (685), Expect = 7e-71
Identities = 140/219 (63%), Positives = 165/219 (74%), Gaps = 10/219 (4%)
Frame = +1
Query: 22 MGISRDSLHKRRATGGRKEALAQEEEV*DGPCAG*HQAEQPSVAVRTVRVRGGHTKFRAL 201
MGISRDS+HKRRATGG+++A ++ + G + + VR VRVRGG+ K+RAL
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPA-NTKLSSNKTVRRVRVRGGNVKWRAL 59
Query: 202 RLDTGNYSWGSEAVTRKVRILDVVYNASNNELVRTQTLVKNAIVQVDATPFKQWYQKHYN 381
RLDTGNYSWGSEAVTRK RILDVVYNASNNELVRTQTLVK+AIVQVDA PFKQWY HY
Sbjct: 60 RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYG 119
Query: 382 VELGAKNQAEIVPK----------PEEIKGSNHVKRKIKERLQKRKLDSHLAEQFSTGRL 531
V++G K + P+ EE K SNHV RK+++R Q R LD+H+ EQF +GRL
Sbjct: 120 VDIGRKKKEPPHPRGCCGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 179
Query: 532 FACISSRPGQCGRCDGYILEGKELEFYVKKMQKKKSKAA 648
ACISSRPGQCGR DGYILEGKELEFY+KK+Q+KK K A
Sbjct: 180 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 218
>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 gi|7440237|pir||T04088 ribosomal protein
S8 - maize gi|1498053|gb|AAB06330.1| ribosomal protein
S8
Length = 221
Score = 268 bits (684), Expect = 9e-71
Identities = 139/220 (63%), Positives = 165/220 (74%), Gaps = 11/220 (5%)
Frame = +1
Query: 22 MGISRDSLHKRRATGGRKEALAQEEEV*DGPCAG*HQAEQPSVAVRTVRVRGGHTKFRAL 201
MGISRDS+HKRRATGG+++A ++ + G + + VR VRVRGG+ K+RAL
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPA-NTKLSSNKTVRRVRVRGGNVKWRAL 59
Query: 202 RLDTGNYSWGSEAVTRKVRILDVVYNASNNELVRTQTLVKNAIVQVDATPFKQWYQKHYN 381
RLDTGNYSWGSEAVTRK RILDVVYNASNNELVRTQTLVK+AIVQVDA PFKQWY HY
Sbjct: 60 RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYG 119
Query: 382 VELGAKNQA-----------EIVPKPEEIKGSNHVKRKIKERLQKRKLDSHLAEQFSTGR 528
V++G K + E+ EE K SNHV RK+++R + R LD H+ EQF +GR
Sbjct: 120 VDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGR 179
Query: 529 LFACISSRPGQCGRCDGYILEGKELEFYVKKMQKKKSKAA 648
L ACISSRPGQCGR DGYILEGKELEFY+KK+Q+KK K+A
Sbjct: 180 LLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA 219
>ref|NP_200732.2| 40S ribosomal protein S8 (RPS8B) [Arabidopsis thaliana]
gi|17367670|sp|Q9FIF3|RS8_ARATH 40S ribosomal protein S8
gi|9759245|dbj|BAB09769.1| 40S ribosomal protein S8
[Arabidopsis thaliana] gi|28416637|gb|AAO42849.1|
At5g59240 [Arabidopsis thaliana]
Length = 210
Score = 267 bits (683), Expect = 1e-70
Identities = 138/209 (66%), Positives = 165/209 (78%)
Frame = +1
Query: 22 MGISRDSLHKRRATGGRKEALAQEEEV*DGPCAG*HQAEQPSVAVRTVRVRGGHTKFRAL 201
MGISRDS+HKRRATGG+++ ++ + G + + VR +RVRGG+ K+RAL
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPA-NTKLSSNKTVRRIRVRGGNVKWRAL 59
Query: 202 RLDTGNYSWGSEAVTRKVRILDVVYNASNNELVRTQTLVKNAIVQVDATPFKQWYQKHYN 381
RLDTGN+SWGSEAVTRK RILDV YNASNNELVRTQTLVK+AIVQVDA PFKQ Y +HY
Sbjct: 60 RLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYG 119
Query: 382 VELGAKNQAEIVPKPEEIKGSNHVKRKIKERLQKRKLDSHLAEQFSTGRLFACISSRPGQ 561
V++G K + E V EE+K SNHV+RK++ R + R LDSHL EQFS+GRL ACI+SRPGQ
Sbjct: 120 VDIGRKKKGEAV-TTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQ 178
Query: 562 CGRCDGYILEGKELEFYVKKMQKKKSKAA 648
CGR DGYILEGKELEFY+KK+QKKK K A
Sbjct: 179 CGRADGYILEGKELEFYMKKLQKKKGKNA 207
>ref|NP_197529.1| 40S ribosomal protein S8 (RPS8A) [Arabidopsis thaliana]
gi|15293007|gb|AAK93614.1| unknown protein [Arabidopsis
thaliana] gi|15450474|gb|AAK96530.1| AT5g20290/F5O24_180
[Arabidopsis thaliana] gi|16974465|gb|AAL31236.1|
AT5g20290/F5O24_180 [Arabidopsis thaliana]
gi|20258879|gb|AAM14111.1| unknown protein [Arabidopsis
thaliana] gi|21592577|gb|AAM64526.1| 40S ribosomal
protein S8-like [Arabidopsis thaliana]
Length = 222
Score = 267 bits (683), Expect = 1e-70
Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 13/222 (5%)
Frame = +1
Query: 22 MGISRDSLHKRRATGGRKEALAQEEEV*DGPCAG*HQAEQPSVAVRTVRVRGGHTKFRAL 201
MGISRDS+HKRRATGG+++ ++ + G + + VR +RVRGG+ K+RAL
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPA-NTKLSSNKTVRRIRVRGGNVKWRAL 59
Query: 202 RLDTGNYSWGSEAVTRKVRILDVVYNASNNELVRTQTLVKNAIVQVDATPFKQWYQKHYN 381
RLDTGNYSWGSEA TRK R+LDVVYNASNNELVRT+TLVK+AIVQVDA PFKQWY HY
Sbjct: 60 RLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYG 119
Query: 382 VELGAKNQA-------------EIVPKPEEIKGSNHVKRKIKERLQKRKLDSHLAEQFST 522
VELG K ++ V PEE+K SNH+ RKI R + R LDSH+ +QF++
Sbjct: 120 VELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFAS 179
Query: 523 GRLFACISSRPGQCGRCDGYILEGKELEFYVKKMQKKKSKAA 648
GRL ACISSRPGQCGR DGYILEGKELEFY+KK+QKKK K A
Sbjct: 180 GRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221