| A. Gametophyte > Sporophyte | ||||
| Definition of the similar sequence | Accession | Ga | Sb | EST clonec |
|---|---|---|---|---|
| Cellular structure, organization and biogenesis | ||||
| chic-P1; stranded; Profilin | gi|17136958 | 28 | 1 | PM018d04 |
| Central intermediary metabolism | ||||
| peptide methionine sulfoxide reductase | gi|16329216 | 7 | 0 | PM013g05 |
| DNA metabolism | ||||
| histone H2B | gi|17352494 | 299 | 24 | PM068b04 |
| H2A histone family | gi|10800130 | 20 | 4 | PM036e11 |
| Energy metabolism | ||||
| ferredoxin component | gi|16329978 | 43 | 19 | PM006b11 |
| light-harvesting complex I polypeptide | gb|AAB39488.1| | 29 | 6 | PM040d01 |
| ATP synthase gamma chain 1 | gi|18412632 | 7 | 0 | PM004e01 |
| ribulose-5-phosphate-3-epimerase | gi|15240250 | 7 | 0 | PM029a06 |
| Protein fate | ||||
| Ubiquitin fusion 80 | gi|17136574 | 16 | 4 | PM032b09 |
| Serine protease-like protein; | gb|AAA61789.1| | 75 | 3 | PM004e06 |
| Protein synthesis | ||||
| ribosomal protein S3a homolog | gi|15232352 | 508 | 74 | PM014c02 |
| protein translation factor Sui1 homolog | gi|15221783 | 30 | 9 | PM040h11 |
| 60s acidic ribosomal protein P1 | gi|15238555 | 20 | 0 | PS008b12 |
| 60S ribosomal protein L21 | gi|18406015 | 17 | 2 | PM023g06 |
| ribosomal protein L27a | gi|20343857 | 18 | 1 | PM044d03 |
| ribosomal protein L10 | gi|5174431 | 13 | 1 | PM054d12 |
| 60S ribosomal protein L18A | gi|15226755 | 12 | 1 | PL035b03 |
| putative ribosomal protein L19 | gi|15235290 | 11 | 1 | PM056f08 |
| 40S ribosomal protein S20-like protein | gi|15232789 | 11 | 1 | PM065b03 |
| 60S ribosomal protein L13 | gi|15229064 | 11 | 1 | PS002g06 |
| ribosomal S29 -like protein | gi|15229840 | 10 | 0 | PS049b04 |
| 60S ribosomal protein - like | gi|15231730 | 10 | 0 | PS018f03 |
| 40S ribsomal protein S6 | gi|15238142 | 7 | 0 | PM057a12 |
| 40S ribosomal protein S25 | gi|15226590 | 7 | 0 | PS001h11 |
| 60s ribosomal protein l30 | gi|19115769 | 7 | 0 | PS005a10 |
| eukaryotic translation initiation factor 3A | gi|4504771 | 7 | 0 | PL016f12 |
| Regulatory functions | ||||
| similar to RAN | gi|20477654 | 28 | 10 | PL017f03 |
| putative MYB-related protein | gi|15232720 | 10 | 1 | PL020h03 |
| Signal transduction | ||||
| MAP kinase (ATMPK7) | gi|15224120 | 8 | 0 | PL022c12 |
| adenylyl cyclase-associated protein 2 | gi|16758742 | 7 | 0 | PL009b05 |
| Transport and binding proteins | ||||
| major intrinsic protein (MIP)- like | gi|15234059 | 8 | 0 | PL020a11 |
| Other category | ||||
| high light-inducible protein | gi|16329801 | 9 | 0 | PM004c08 |
| Unclassified | ||||
| KIAA1856 protein | gi|20540147 | 142 | 13 | PS003a09 |
| chymotrypsin-like | gi|13374559 | 57 | 0 | PM013g08 |
| fibrillin | gi|17231810 | 12 | 2 | PM051e10 |
| chromodomain protein, Y chromosome-like | gi|6753398 | 9 | 0 | PL005a09 |
| Expressed protein | gi|18415779 | 8 | 0 | PM043h09 |
| Hypothetical protein | gi|18858169 | 81 | 1 | PL028c09 |
| Hypothetical protein | gi|19921350 | 30 | 1 | PL014d07 |
| Hypothetical protein | gi|18585382 | 28 | 0 | PL010d09 |
| Hypothetical protein | gi|15220570 | 26 | 0 | PM006g05 |
| Hypothetical protein | gi|15596364 | 21 | 0 | PL012g02 |
| Hypothetical protein | gi|15610650 | 20 | 0 | PL005g10 |
| Hypothetical protein | gi|18858067 | 18 | 0 | PM054b11 |
| Hypothetical protein | gi|13812317 | 13 | 3 | PM026b11 |
| Hypothetical protein | gi|17505853 | 11 | 0 | PM021a10 |
| Hypothetical protein | gi|18313418 | 11 | 0 | PM015h02 |
| Hypothetical protein | gi|15241316 | 9 | 0 | PM024b01 |
| Hypothetical protein | gi|17568987 | 9 | 0 | PL032e12 |
| Hypothetical protein | gi|13812317 | 7 | 0 | PS048a10 |
| Hypothetical protein | gi|17230342 | 7 | 0 | PS022h04 |
| No similarity | 128 | 42 | PL002a11 | |
| No similarity | 113 | 0 | PL003b04 | |
| No similarity | 58 | 0 | PL001f05 | |
| No similarity | 48 | 11 | PL019d09 | |
| No similarity | 47 | 10 | PL013b09 | |
| No similarity | 46 | 9 | PL014h10 | |
| No similarity | 40 | 0 | PL015a05 | |
| No similarity | 39 | 3 | PL025h06 | |
| No similarity | 38 | 0 | PL014h06 | |
| No similarity | 32 | 1 | PM043b06 | |
| No similarity | 31 | 0 | PS040a01 | |
| No similarity | 29 | 0 | PM022f12 | |
| No similarity | 25 | 0 | PL026c11 | |
| No similarity | 25 | 0 | PM064d01 | |
| No similarity | 24 | 5 | PS048d07 | |
| No similarity | 20 | 0 | PM008f01 | |
| No similarity | 19 | 0 | PM010c05 | |
| No similarity | 17 | 0 | PM002g05 | |
| No similarity | 13 | 0 | PM027f05 | |
| No similarity | 13 | 3 | PM041a03 | |
| No similarity | 12 | 0 | PM019e09 | |
| No similarity | 12 | 0 | PL006h12 | |
| No similarity | 12 | 0 | PL022b06 | |
| No similarity | 11 | 0 | PS015g05 | |
| No similarity | 11 | 0 | PM031d09 | |
| No similarity | 10 | 0 | PL028e06 | |
| No similarity | 10 | 0 | PM024d12 | |
| No similarity | 10 | 0 | PM009c02 | |
| No similarity | 10 | 1 | PM006a06 | |
| No similarity | 9 | 0 | PM063g09 | |
| No similarity | 8 | 0 | PS045d12 | |
| No similarity | 8 | 0 | PM048e08 | |
| No similarity | 8 | 0 | PS023h05 | |
| No similarity | 7 | 0 | PS020c01 | |
| No similarity | 7 | 0 | PM016d04 | |
| No similarity | 7 | 0 | PS045a02 | |
| No similarity | 7 | 0 | PS007b11 | |
| B. Sporophyte > Gametophyte | ||||
| Definition of the similar sequence | Accession | Ga | Sb | EST clonec |
| Cellular structure, organization and biogenesis | ||||
| similar to kinesin light chain | gi|17231272 | 9 | 99 | PF004d06 |
| tubulin beta subunit | gi|13812076 | 4 | 30 | PF006h09 |
| tubulin alpha-2/alpha-4 chain | gi|15220329 | 2 | 23 | PF008e08 |
| similar to kinesin light chain | gi|17231272 | 0 | 11 | PF009g05 |
| clathrin, heavy polypeptide | gi|9506497 | 1 | 10 | PFL012g04 |
| Central intermediary metabolism | ||||
| NADP-specific glutamate dehydrogenase | gi|16124099 | 18 | 52 | PF003f01 |
| putative s-adenosylmethionine synthetase | gi|15228048 | 12 | 29 | PFL059h07 |
| DNA metabolism | ||||
| DNA topoisomerase I | gi|15240492 | 2 | 14 | PF027d12 |
| Energy metabolism | ||||
| glycogen phosphorylase | gi|16766820 | 18 | 56 | PF009d02 |
| NAD-dependent aldehyde dehydrogenase | gi|20094544 | 16 | 50 | PF003d06 |
| Aconitase | gi|17864292 | 13 | 37 | PF003b02 |
| phycocyanin-associated rod linker protein | gi|17228026 | 11 | 36 | PF022e07 |
| glyceraldehyde-3-phosphate dehydrogenase | sp|P54270| | 14 | 36 | PF007e09 |
| required for expression of functional Rieske iron-sulfur protein | gi|6320583 | 3 | 32 | PF013f03 |
| NAD(P) transhydrogenase, beta subunit | gi|15676870 | 3 | 27 | PF020c07 |
| malate dehydrogenase | gi|15805354 | 1 | 22 | PFL007a02 |
| putative trehalose-6-phosphate synthase | gi|15224213 | 3 | 20 | PFL002d05 |
| alpha-galactosidase | gi|15614786 | 1 | 16 | PF002d10 |
| pyrophosphate-dependent phosphofructo-1-kinase-like protein | gi|18423885 | 1 | 16 | PFL016b08 |
| putative phosphoenolpyruvate carboxylase | dbj|BAB92172.1| | 1 | 14 | PFL011b08 |
| Enolase | gi|20808178 | 1 | 11 | PF013h07 |
| Fatty acid and phospholipid metabolism | ||||
| triacylglycerol lipase like protein | gi|18414755 | 0 | 13 | PF027e09 |
| Protein fate | ||||
| heat shock protein 82 | gi|13812107 | 22 | 97 | PF002g05 |
| sit4 suppressor, dnaJ homolog; Sis1p | gi|6324321 | 8 | 88 | PF001e01 |
| heat shock protein 70KD | gi|13812189 | 6 | 82 | PF004h06 |
| ubiquitin precursor UBI4 | gi|6322989 | 21 | 81 | PF005h12 |
| intracellular serine protease | gi|16078384 | 19 | 63 | PF004h03 |
| heat shock 70kD protein 4 | gi|20547107 | 8 | 61 | PF005g09 |
| heat-shock protein - like | gi|15239455 | 4 | 36 | PF005d02 |
| PROBABLE AMINOPEPTIDASE N | gi|17546844 | 8 | 25 | PF004e12 |
| protein disulfide-isomerase-like protein | gi|15233138 | 6 | 23 | PF012c10 |
| putative DNA-J-like protein | gi|19115249 | 2 | 21 | PFL046f04 |
| HSP90-like protein | gi|15233740 | 0 | 17 | PFL024b06 |
| ubiquitin-protein ligase 1, putative | gi|15222790 | 2 | 14 | PF030g05 |
| heat-shock protein | gi|15237214 | 0 | 8 | PFL012h03 |
| Protein synthesis | ||||
| translation elongation factor eEF-3 homolog | gi|6325030 | 70 | 309 | PF002a05 |
| Elongation factor 1-alpha | gi|17552884 | 29 | 77 | PF003d10 |
| elongation factor EF-2 | gi|13812020 | 17 | 67 | PFL001d01 |
| eukaryotic peptide chain release factor subunit 1, putative | gi|15222115 | 0 | 8 | PFL028d11 |
| Purines, pyrimidines, nucleosides, and nucleotides | ||||
| similar to Brefeldin A-inhibited guanine nucleotide-exchange protein 1 | gi|20819849 | 0 | 7 | PFL049f11 |
| Regulatory functions | ||||
| Homeobox protein Hox-A3 | gi|13562112 | 0 | 10 | PFL017b07 |
| ankyrin 2, isoform 2 | gi|10947054 | 0 | 9 | PFL005c10 |
| Signal transduction | ||||
| protein phosphatase 1, catalytic subunit, alpha isoform | gi|13994195 | 11 | 41 | PF013b08 |
| protein phosphatase 2a, catalytic subunit, beta isoform | gi|4758952 | 4 | 16 | PF002f01 |
| protein kinase, putative | gi|15230108 | 1 | 14 | PFL062e04 |
| Protein C kinase 98E | gi|17738271 | 0 | 9 | PFL026d07 |
| ELKL motif kinase | gi|6679643 | 0 | 8 | PFL004g10 |
| Transcription | ||||
| Uba1-P1 | gi|17137466 | 4 | 31 | PF019d10 |
| DNA-directed RNA polymerase | gi|15233338 | 0 | 11 | PFL017c02 |
| Transport and binding proteins | ||||
| ATPase, Na+/K+ transporting, alpha 4 polypeptide | gi|12408294 | 5 | 114 | PF011b11 |
| copper transport protein | gi|15237802 | 14 | 32 | PF041c11 |
| probable ABC transporter | gi|19112731 | 5 | 25 | PF006e01 |
| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 |
gi|6680748 | 2 | 23 | PF019f08 |
| ABC transporter, HlyB/MsbA family | gi|16125563 | 0 | 22 | PFL015c05 |
| Other categories | ||||
| glutathione-S-transferase | gi|8393502 | 1 | 26 | PF002a04 |
| Unclassified | ||||
| similar to WNT-5A protein precursor | gi|20537202 | 19 | 47 | PF002d07 |
| integrin alpha X | gi|13928960 | 14 | 45 | PF015h05 |
| expressed protein | gi|18396352 | 15 | 42 | PF012f12 |
| latex-abundant protein, putative | gi|15219345 | 9 | 32 | PF003h11 |
| cardiac morphogenesis | gi|6756015 | 1 | 30 | PF003h07 |
| TPR-repeat protein | gi|15221564 | 3 | 27 | PF024c02 |
| expressed protein | gi|18406388 | 5 | 26 | PF010c10 |
| metacaspase; Mca1p | gi|6324771 | 1 | 14 | PFL031g12 |
| expressed protein | gi|18394951 | 0 | 13 | PF011b08 |
| PUTATIVE HEMAGGLUTININ-RELATED PROTEIN | gi|17544834 | 0 | 10 | PFL099f04 |
| pirin | gi|4505823 | 0 | 8 | PF006g09 |
| germin-like protein | gi|15217561 | 0 | 8 | PF041h09 |
| Niemann-Pick disease, type C1 | gi|4557803 | 0 | 8 | PFL016a10 |
| insulin degrading enzyme | gi|6981076 | 0 | 8 | PFL035a02 |
| Hypothetical protein | gi|17232705 | 17 | 237 | PF008b04 |
| Hypothetical protein | gi|13812139 | 16 | 66 | PFL001g06 |
| Hypothetical protein | gi|15225631 | 16 | 38 | PFL006c03 |
| Hypothetical protein | gi|17228240 | 0 | 27 | PF004f09 |
| Hypothetical protein | gi|20540434 | 8 | 26 | PFL002d01 |
| Hypothetical protein | gi|10954782 | 0 | 10 | PFL033d12 |
| Hypothetical protein | gi|19921772 | 1 | 10 | PF005b12 |
| Hypothetical protein | gi|18581488 | 0 | 8 | PFL055f05 |
| Hypothetical protein | gi|13637608 | 0 | 7 | PFL017e10 |
| No similarity | 38 | 98 | PF002e11 | |
| No similarity | 5 | 94 | PF001f11 | |
| No similarity | 10 | 65 | PFL064a11 | |
| No similarity | 2 | 51 | PF007f02 | |
| No similarity | 15 | 46 | PFL072e01 | |
| No similarity | 11 | 30 | PF029h10 | |
| No similarity | 6 | 28 | PFL033e12 | |
| No similarity | 7 | 25 | PF015h12 | |
| No similarity | 0 | 24 | PFL061e01 | |
| No similarity | 0 | 21 | PFL045a05 | |
| No similarity | 1 | 20 | PFL087g11 | |
| No similarity | 3 | 18 | PFL004h11 | |
| No similarity | 1 | 17 | PF021g04 | |
| No similarity | 1 | 17 | PF011d08 | |
| No similarity | 2 | 16 | PFL065b11 | |
| No similarity | 0 | 15 | PFL023e07 | |
| No similarity | 3 | 15 | PFL066a08 | |
| No similarity | 0 | 12 | PFL001b05 | |
| No similarity | 0 | 12 | PFL061b01 | |
| No similarity | 1 | 12 | PFL083h03 | |
| No similarity | 1 | 12 | PFL005d08 | |
| No similarity | 1 | 12 | PFL065e04 | |
| No similarity | 0 | 10 | PF029e09 | |
| No similarity | 1 | 10 | PFL015g08 | |
| No similarity | 1 | 10 | PF040f08 | |
| No similarity | 1 | 10 | PFL005d07 | |
| No similarity | 0 | 8 | PF040c08 | |
| No similarity | 0 | 8 | PFL038c06 | |
| No similarity | 0 | 8 | PFL085c12 | |
| No similarity | 0 | 7 | PF015a06 | |
| No similarity | 0 | 7 | PFL039b04 | |
| No similarity | 0 | 7 | PFL062f01 | |
| a) Number of the gametophyte ESTs | ||||
| b) Number of the sporophyte ESTs | ||||
| c) A representative EST clone | ||||