Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021527A_C01 KMC021527A_c01
(533 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB78667.1| P0452F10.4 [Oryza sativa (japonica cultivar-grou... 267 7e-71
ref|NP_567400.1| putative protein; protein id: At4g13250.1, supp... 255 1e-67
pir||T07705 hypothetical protein F17N18.140 - Arabidopsis thalia... 248 3e-65
gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa (ja... 150 1e-35
ref|NP_568145.1| putative protein; protein id: At5g04900.1, supp... 145 3e-34
>dbj|BAB78667.1| P0452F10.4 [Oryza sativa (japonica cultivar-group)]
gi|20804427|dbj|BAB92125.1| P0443E07.30 [Oryza sativa
(japonica cultivar-group)]
Length = 640
Score = 267 bits (682), Expect = 7e-71
Identities = 126/155 (81%), Positives = 143/155 (91%)
Frame = +3
Query: 69 ACDVCEPRDVQRLANFAVNELGYIDIWINNAGANKGFRPLLEFSDEDIQQIVSTNLVGSI 248
+CDVC+P DV++L NFA +ELG IDIWINNAG NKGFRPL+ FSDEDI QIVSTNLVGS+
Sbjct: 217 SCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSL 276
Query: 249 LCTREAMRIMRNQVKAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKECKRSK 428
LCTREAM +M++Q K GH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQFQ SLLKE +RSK
Sbjct: 277 LCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKESRRSK 336
Query: 429 VGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELP 533
VGVHTASPGMVLTDLLLSGS+++N+QMFN+ICELP
Sbjct: 337 VGVHTASPGMVLTDLLLSGSSLRNKQMFNLICELP 371
>ref|NP_567400.1| putative protein; protein id: At4g13250.1, supported by cDNA:
gi_16323185 [Arabidopsis thaliana]
gi|16323186|gb|AAL15327.1| AT4g13250/F17N18_140
[Arabidopsis thaliana]
Length = 496
Score = 255 bits (652), Expect(2) = 1e-67
Identities = 120/155 (77%), Positives = 140/155 (89%)
Frame = +3
Query: 69 ACDVCEPRDVQRLANFAVNELGYIDIWINNAGANKGFRPLLEFSDEDIQQIVSTNLVGSI 248
ACDVC+P DV++L+NFAV ELG I+IWINNAG NKGFRPLLEF++EDI QIVSTNL+GSI
Sbjct: 233 ACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGSI 292
Query: 249 LCTREAMRIMRNQVKAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKECKRSK 428
LCTR AM +M Q GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQF GS++KE +++
Sbjct: 293 LCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQKTN 352
Query: 429 VGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELP 533
VG+HTASPGMVLT+LLLSGS+++N+QMFNIICELP
Sbjct: 353 VGLHTASPGMVLTELLLSGSSIKNKQMFNIICELP 387
Score = 22.7 bits (47), Expect(2) = 1e-67
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 1 KEGIASAVGSTLTKLSQAKVVGM 69
KE +++A S KLS AKVVG+
Sbjct: 210 KEIMSNASESARKKLSDAKVVGI 232
>pir||T07705 hypothetical protein F17N18.140 - Arabidopsis thaliana
gi|4753659|emb|CAB41935.1| putative protein [Arabidopsis
thaliana] gi|7268027|emb|CAB78367.1| putative protein
[Arabidopsis thaliana]
Length = 447
Score = 248 bits (632), Expect(2) = 3e-65
Identities = 120/164 (73%), Positives = 140/164 (85%), Gaps = 9/164 (5%)
Frame = +3
Query: 69 ACDVCEPRDVQRLANFAVNELGYIDIW---------INNAGANKGFRPLLEFSDEDIQQI 221
ACDVC+P DV++L+NFAV ELG I+IW INNAG NKGFRPLLEF++EDI QI
Sbjct: 175 ACDVCKPEDVEKLSNFAVKELGSINIWVKKHISFCTINNAGTNKGFRPLLEFTEEDITQI 234
Query: 222 VSTNLVGSILCTREAMRIMRNQVKAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGS 401
VSTNL+GSILCTR AM +M Q GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQF GS
Sbjct: 235 VSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGS 294
Query: 402 LLKECKRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELP 533
++KE +++ VG+HTASPGMVLT+LLLSGS+++N+QMFNIICELP
Sbjct: 295 IVKESQKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELP 338
Score = 22.7 bits (47), Expect(2) = 3e-65
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 1 KEGIASAVGSTLTKLSQAKVVGM 69
KE +++A S KLS AKVVG+
Sbjct: 152 KEIMSNASESARKKLSDAKVVGI 174
>gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa (japonica
cultivar-group)]
Length = 343
Score = 150 bits (378), Expect = 1e-35
Identities = 77/157 (49%), Positives = 109/157 (69%), Gaps = 5/157 (3%)
Frame = +3
Query: 72 CDVCEPRDVQRLANFAVNELGYIDIWINNAGANK-GFRPLLEFSDEDIQQIVSTNLVGSI 248
CDV E +DV+ L +FA +++ YIDIWINNAG+N ++PL+E SDE + ++++TN +G +
Sbjct: 131 CDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTNTLGLM 190
Query: 249 LCTREAMRIMRNQVKAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKECKRSK 428
+C REA+ +MRNQ + GHIFN+DGAGS G TP A YG+TK + SL E + ++
Sbjct: 191 ICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNE 250
Query: 429 VG---VHTASPGMVLTDLLLSGSTVQNRQMF-NIICE 527
V VH SPGMV TDLL+SG+T + + F NI+ E
Sbjct: 251 VNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAE 287
>ref|NP_568145.1| putative protein; protein id: At5g04900.1, supported by cDNA:
14018. [Arabidopsis thaliana] gi|21553369|gb|AAM62462.1|
unknown [Arabidopsis thaliana]
Length = 348
Score = 145 bits (366), Expect = 3e-34
Identities = 78/157 (49%), Positives = 101/157 (63%), Gaps = 5/157 (3%)
Frame = +3
Query: 72 CDVCEPRDVQRLANFAVNELGYIDIWINNAGANK-GFRPLLEFSDEDIQQIVSTNLVGSI 248
CDV E +DV+ L ++ L YIDIWINNAG+N F+PL E SDED+ ++V TN +G +
Sbjct: 136 CDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLM 195
Query: 249 LCTREAMRIMRNQVKAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKECKR-- 422
LC REAM +M Q + GHIFN+DGAGS G TP A YG+TK + SL E +
Sbjct: 196 LCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQD 255
Query: 423 -SKVGVHTASPGMVLTDLLLSGSTVQNRQMF-NIICE 527
V VH SPGMV TDLL+SG+T + + F N++ E
Sbjct: 256 VKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAE 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,732,236
Number of Sequences: 1393205
Number of extensions: 8693060
Number of successful extensions: 28448
Number of sequences better than 10.0: 1971
Number of HSP's better than 10.0 without gapping: 26269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27796
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
