Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021496A_C01 KMC021496A_c01
(490 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD25940.1|AF085279_13 hypothetical APG protein [Arabidopsis ... 131 4e-30
ref|NP_181554.1| putative GDSL-motif lipase hydrolase; protein i... 131 4e-30
dbj|BAB68101.1| putative GDSL-motif lipase/hydrolase [Oryza sati... 116 1e-25
gb|AAM61458.1| putative GDSL-motif lipase/hydrolase [Arabidopsis... 115 2e-25
ref|NP_180581.1| putative GDSL-motif lipase hydrolase; protein i... 115 3e-25
>gb|AAD25940.1|AF085279_13 hypothetical APG protein [Arabidopsis thaliana]
Length = 353
Score = 131 bits (330), Expect = 4e-30
Identities = 61/125 (48%), Positives = 82/125 (64%), Gaps = 1/125 (0%)
Frame = -1
Query: 481 SNNTEDLFQ-RVCNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIHSP 305
S NT +F R+C + QN DS+VYN KLQ + L +G+KV Y DIY+P +DMI P
Sbjct: 229 SINTPRIFHHRICTEHQNDDSRVYNQKLQKLIFGLSQRFRGSKVLYLDIYSPLIDMIKHP 288
Query: 304 AKYGFEQTLEGCCGSGLVEMGPVCNAFAPTCPDASKYLFWDAVHPTQAGYWFLTENSRET 125
KYG E+TL GCCG+GL+E GP+C + TC D SKYLF+D+VHP+Q Y + + +
Sbjct: 289 RKYGLEETLRGCCGTGLLEAGPLCQPLSRTCDDVSKYLFFDSVHPSQTAYSVIASFALQK 348
Query: 124 VLPYL 110
+ P L
Sbjct: 349 LFPLL 353
>ref|NP_181554.1| putative GDSL-motif lipase hydrolase; protein id: At2g40250.1
[Arabidopsis thaliana] gi|25336275|pir||B84827 probable
GDSL-motif lipase/hydrolase [imported] - Arabidopsis
thaliana gi|4586042|gb|AAD25660.1| putative GDSL-motif
lipase/hydrolase [Arabidopsis thaliana]
Length = 361
Score = 131 bits (330), Expect = 4e-30
Identities = 61/125 (48%), Positives = 82/125 (64%), Gaps = 1/125 (0%)
Frame = -1
Query: 481 SNNTEDLFQ-RVCNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIHSP 305
S NT +F R+C + QN DS+VYN KLQ + L +G+KV Y DIY+P +DMI P
Sbjct: 237 SINTPRIFHHRICTEHQNDDSRVYNQKLQKLIFGLSQRFRGSKVLYLDIYSPLIDMIKHP 296
Query: 304 AKYGFEQTLEGCCGSGLVEMGPVCNAFAPTCPDASKYLFWDAVHPTQAGYWFLTENSRET 125
KYG E+TL GCCG+GL+E GP+C + TC D SKYLF+D+VHP+Q Y + + +
Sbjct: 297 RKYGLEETLRGCCGTGLLEAGPLCQPLSRTCDDVSKYLFFDSVHPSQTAYSVIASFALQK 356
Query: 124 VLPYL 110
+ P L
Sbjct: 357 LFPLL 361
>dbj|BAB68101.1| putative GDSL-motif lipase/hydrolase [Oryza sativa (japonica
cultivar-group)]
Length = 350
Score = 116 bits (291), Expect = 1e-25
Identities = 52/125 (41%), Positives = 82/125 (65%)
Frame = -1
Query: 490 VTISNNTEDLFQRVCNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIH 311
+T+S + + R C D+QN D+Q YN+KL+ L +L+ +L G+K+ Y D Y F +++
Sbjct: 227 ITLSGDPD----RACVDEQNRDAQAYNSKLEKLLPALQGSLHGSKIVYLDAYQAFKEILD 282
Query: 310 SPAKYGFEQTLEGCCGSGLVEMGPVCNAFAPTCPDASKYLFWDAVHPTQAGYWFLTENSR 131
+PAKYGF + GCCG+GL E+G +CNA +P C + S ++F+DAVHPT+ Y T+
Sbjct: 283 NPAKYGFIEITRGCCGTGLREVGLLCNALSPICRNESSFVFYDAVHPTERVYRITTDYIL 342
Query: 130 ETVLP 116
+ +P
Sbjct: 343 KNAIP 347
>gb|AAM61458.1| putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana]
Length = 360
Score = 115 bits (289), Expect = 2e-25
Identities = 47/100 (47%), Positives = 72/100 (72%)
Frame = -1
Query: 454 RVCNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIHSPAKYGFEQTLE 275
R C + N DS +YN KLQ+ L + A+L G+K Y D+Y P M+MI +P+KYGF++T
Sbjct: 244 RFCLEHHNKDSVLYNEKLQNLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKR 303
Query: 274 GCCGSGLVEMGPVCNAFAPTCPDASKYLFWDAVHPTQAGY 155
GCCG+G +E G +CN F+P C + S+++F+D++HP++A Y
Sbjct: 304 GCCGTGFLETGFMCNVFSPVCQNRSEFMFFDSIHPSEATY 343
>ref|NP_180581.1| putative GDSL-motif lipase hydrolase; protein id: At2g30220.1
[Arabidopsis thaliana] gi|7488229|pir||T00578 probable
GDSL-motif lipase/hydrolase [imported] - Arabidopsis
thaliana gi|2347207|gb|AAC16946.1| putative GDSL-motif
lipase/hydrolase [Arabidopsis thaliana]
gi|20197102|gb|AAM14915.1| putative GDSL-motif lipase
hydrolase [Arabidopsis thaliana]
Length = 358
Score = 115 bits (288), Expect = 3e-25
Identities = 47/102 (46%), Positives = 74/102 (72%)
Frame = -1
Query: 451 VCNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIHSPAKYGFEQTLEG 272
+C +Q+N DS +YN KL L ++A+L G+K Y ++Y P MDMI +P+KYGF++T +G
Sbjct: 243 ICVEQENKDSILYNQKLVKKLPEIQASLPGSKFLYANVYDPVMDMIRNPSKYGFKETKKG 302
Query: 271 CCGSGLVEMGPVCNAFAPTCPDASKYLFWDAVHPTQAGYWFL 146
CCG+G +E +C + + TCP+ S +LFWD++HP++A Y +L
Sbjct: 303 CCGTGYLETSFLCTSLSKTCPNHSDHLFWDSIHPSEAAYKYL 344
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,724,935
Number of Sequences: 1393205
Number of extensions: 9559586
Number of successful extensions: 33574
Number of sequences better than 10.0: 272
Number of HSP's better than 10.0 without gapping: 31742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33389
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
