Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021462A_C01 KMC021462A_c01
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P26517|G3PX_HORVU Glyceraldehyde 3-phosphate dehydrogenase, c... 96 2e-19
emb|CAA42103.1| glycolytic glyceraldehyde 3-phosphate dehydrogen... 94 1e-18
sp|P25861|G3PC_ANTMA Glyceraldehyde 3-phosphate dehydrogenase, c... 94 1e-18
sp|P26519|G3PC_PETCR Glyceraldehyde 3-phosphate dehydrogenase, c... 93 2e-18
sp|P08735|G3PC_MAIZE Glyceraldehyde 3-phosphate dehydrogenase, c... 93 2e-18
>sp|P26517|G3PX_HORVU Glyceraldehyde 3-phosphate dehydrogenase, cytosolic
gi|66010|pir||DEBHG glyceraldehyde-3-phosphate
dehydrogenase (phosphorylating) (EC 1.2.1.12) - barley
gi|18978|emb|CAA42901.1| glyceraldehyde 3-phosphate
dehydrogenase [Hordeum vulgare]
Length = 337
Score = 96.3 bits (238), Expect = 2e-19
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 503 FVGDCRSSIFDAKAGISLNNHFVKLVSWYDNEWGYSSRVVDLIRHMASVQ 354
FVGD RSSIFDAKAGI+LN+HFVKLVSWYDNEWGYS+RVVDLIRHMA Q
Sbjct: 288 FVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337
>emb|CAA42103.1| glycolytic glyceraldehyde 3-phosphate dehydrogenase [Antirrhinum
majus]
Length = 336
Score = 93.6 bits (231), Expect = 1e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -3
Query: 503 FVGDCRSSIFDAKAGISLNNHFVKLVSWYDNEWGYSSRVVDLIRHMASVQ 354
FVGD RSSIFDAKAGI+LN++FVKLVSWYDNEWGYS+RVVDLI HMASVQ
Sbjct: 287 FVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 336
>sp|P25861|G3PC_ANTMA Glyceraldehyde 3-phosphate dehydrogenase, cytosolic
gi|66012|pir||DESKG glyceraldehyde-3-phosphate
dehydrogenase (phosphorylating) (EC 1.2.1.12) - garden
snapdragon
Length = 337
Score = 93.6 bits (231), Expect = 1e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -3
Query: 503 FVGDCRSSIFDAKAGISLNNHFVKLVSWYDNEWGYSSRVVDLIRHMASVQ 354
FVGD RSSIFDAKAGI+LN++FVKLVSWYDNEWGYS+RVVDLI HMASVQ
Sbjct: 288 FVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 337
>sp|P26519|G3PC_PETCR Glyceraldehyde 3-phosphate dehydrogenase, cytosolic
gi|66016|pir||DEPZG glyceraldehyde-3-phosphate
dehydrogenase (phosphorylating) (EC 1.2.1.12) - parsley
gi|20549|emb|CAA42902.1| glyceraldehyde 3-phosphate
dehydrogenase [Petroselinum crispum]
Length = 336
Score = 92.8 bits (229), Expect = 2e-18
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = -3
Query: 503 FVGDCRSSIFDAKAGISLNNHFVKLVSWYDNEWGYSSRVVDLIRHMASV 357
FVGD RSSIFDAKAGI+LN +FVK+VSWYDNEWGYS+RV+DLIRHMASV
Sbjct: 287 FVGDSRSSIFDAKAGIALNGNFVKVVSWYDNEWGYSNRVIDLIRHMASV 335
>sp|P08735|G3PC_MAIZE Glyceraldehyde 3-phosphate dehydrogenase, cytosolic 1
gi|295853|emb|CAA33620.1| GAPDH [Zea mays]
Length = 337
Score = 92.8 bits (229), Expect = 2e-18
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -3
Query: 503 FVGDCRSSIFDAKAGISLNNHFVKLVSWYDNEWGYSSRVVDLIRHMASVQ 354
F+GD RSSIFDAKAGI+LN+HFVKLVSWYDNEWGYS+RVVDLIRHM Q
Sbjct: 288 FLGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 403,846,743
Number of Sequences: 1393205
Number of extensions: 7742156
Number of successful extensions: 17035
Number of sequences better than 10.0: 1279
Number of HSP's better than 10.0 without gapping: 16734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16996
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
