Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021381A_C01 KMC021381A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01310.1| gene_id:MPN9.20~unknown protein [Arabidopsis tha... 150 1e-35
ref|NP_188629.1| unknown protein; protein id: At3g19950.1, suppo... 150 1e-35
gb|AAL59019.1|AC087182_2 putative zinc finger protein [Oryza sat... 132 2e-30
ref|NP_200445.1| putative protein; protein id: At5g56340.1, supp... 86 2e-16
ref|NP_567039.1| Expressed protein; protein id: At3g56580.1, sup... 84 1e-15
>dbj|BAB01310.1| gene_id:MPN9.20~unknown protein [Arabidopsis thaliana]
Length = 386
Score = 150 bits (378), Expect = 1e-35
Identities = 88/191 (46%), Positives = 114/191 (59%), Gaps = 20/191 (10%)
Frame = +2
Query: 20 NPNPNPIHPFFSFTTASPAAASTAFPLAFPAATQPFDDLSALFGTRSSPPFGAD------ 181
+PNPN F +P ++ + FP+A P +T L +FG+ ++ P G D
Sbjct: 113 DPNPNQSLNF------NPNSSDSFFPMADPFSTL----LPLIFGSSAAAPSGMDFMSLFG 162
Query: 182 --------------TNDAFNPFAFLQNYVQTLAAGGANVQFVIENSGDPTGAFRIPSNVN 319
+DAF+PF FLQN++QTL + G + +FVIEN G R+P N
Sbjct: 163 PSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGN-RMPGNF- 220
Query: 320 HGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKD 499
GDYFFGPGLE+LIQQLAENDPNR GTPPASKSA++ LP V VT+++L S+ QCAVC D
Sbjct: 221 -GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMD 279
Query: 500 IFGLGDTAKQM 532
F G KQM
Sbjct: 280 EFEDGSDVKQM 290
>ref|NP_188629.1| unknown protein; protein id: At3g19950.1, supported by cDNA:
gi_20465262 [Arabidopsis thaliana]
gi|20465263|gb|AAM19951.1| AT3g19950/MPN9_19
[Arabidopsis thaliana] gi|23308365|gb|AAN18152.1|
At3g19950/MPN9_19 [Arabidopsis thaliana]
Length = 328
Score = 150 bits (378), Expect = 1e-35
Identities = 88/191 (46%), Positives = 114/191 (59%), Gaps = 20/191 (10%)
Frame = +2
Query: 20 NPNPNPIHPFFSFTTASPAAASTAFPLAFPAATQPFDDLSALFGTRSSPPFGAD------ 181
+PNPN F +P ++ + FP+A P +T L +FG+ ++ P G D
Sbjct: 55 DPNPNQSLNF------NPNSSDSFFPMADPFSTL----LPLIFGSSAAAPSGMDFMSLFG 104
Query: 182 --------------TNDAFNPFAFLQNYVQTLAAGGANVQFVIENSGDPTGAFRIPSNVN 319
+DAF+PF FLQN++QTL + G + +FVIEN G R+P N
Sbjct: 105 PSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGN-RMPGNF- 162
Query: 320 HGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKD 499
GDYFFGPGLE+LIQQLAENDPNR GTPPASKSA++ LP V VT+++L S+ QCAVC D
Sbjct: 163 -GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMD 221
Query: 500 IFGLGDTAKQM 532
F G KQM
Sbjct: 222 EFEDGSDVKQM 232
>gb|AAL59019.1|AC087182_2 putative zinc finger protein [Oryza sativa]
Length = 370
Score = 132 bits (333), Expect = 2e-30
Identities = 81/182 (44%), Positives = 106/182 (57%), Gaps = 24/182 (13%)
Frame = +2
Query: 59 TTASPAAASTAFPL---AFPAATQPFDDLSALFGTRSSP------------------PFG 175
T+AS AAA+ A P + AAT P DLSA + P
Sbjct: 72 TSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMPGTTSAAGTATP 131
Query: 176 ADTNDAFNPFAFLQNYVQTLAAGGANVQFVIENS--GDPTGAFRIPSNVNHGDYFFGPGL 349
D D F+ F QNY+Q L GGAN+Q +++++ G G R+ + GDYF GPGL
Sbjct: 132 EDEPDGFDAVTFFQNYLQNLMDGGANIQVLLDDASVGLAPGIGRV-GGASFGDYFVGPGL 190
Query: 350 EELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELL-ASDSAQCAVCKDIFGLGDTAK 526
E+LI+QL ENDPNR GTPPA+KSA+ LPDV VT+ ++ A+D A+CAVCK+ F G+ AK
Sbjct: 191 EQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAK 250
Query: 527 QM 532
QM
Sbjct: 251 QM 252
>ref|NP_200445.1| putative protein; protein id: At5g56340.1, supported by cDNA:
gi_17380897, supported by cDNA: gi_20259580 [Arabidopsis
thaliana] gi|10177832|dbj|BAB11261.1|
gene_id:MCD7.7~pir||T05064~similar to unknown protein
[Arabidopsis thaliana] gi|17380898|gb|AAL36261.1|
unknown protein [Arabidopsis thaliana]
gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis
thaliana]
Length = 396
Score = 86.3 bits (212), Expect = 2e-16
Identities = 44/76 (57%), Positives = 51/76 (66%)
Frame = +2
Query: 305 PSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQC 484
PS + GDYF GPGL+ L+Q LAENDPNR+GTPPA K AVE LP V + E L QC
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 259
Query: 485 AVCKDIFGLGDTAKQM 532
+VC D F G AK+M
Sbjct: 260 SVCLDDFEKGTEAKEM 275
>ref|NP_567039.1| Expressed protein; protein id: At3g56580.1, supported by cDNA:
gi_15028360 [Arabidopsis thaliana]
gi|15028361|gb|AAK76657.1| unknown protein [Arabidopsis
thaliana] gi|20465561|gb|AAM20263.1| unknown protein
[Arabidopsis thaliana]
Length = 320
Score = 83.6 bits (205), Expect = 1e-15
Identities = 46/98 (46%), Positives = 58/98 (58%)
Frame = +2
Query: 239 AGGANVQFVIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKS 418
AGG N +G G I N GDYFFGPGLEELI+QL+ + RG PPA KS
Sbjct: 107 AGGDNSSVEAFVNGAAPG-IGIARGTNAGDYFFGPGLEELIEQLSSGT-HHRGPPPAPKS 164
Query: 419 AVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQM 532
+++ LP + +T++ L S + C VCKD F L AKQM
Sbjct: 165 SIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQM 202
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,690,821
Number of Sequences: 1393205
Number of extensions: 17106525
Number of successful extensions: 494396
Number of sequences better than 10.0: 9247
Number of HSP's better than 10.0 without gapping: 114462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289765
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
