KMC021265A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC021265A_C01 KMC021265A_c01
atgtggaaccaaacattccgtaagtcAATAACTTGGAAGACAAACTACATATATCTCACC
AACTGAAAATCAAGCTATATAATCAAGTTCCAATTGAAAAAAATACTAAAATAAAATACA
ATATCTGAAAATTCATCTCGATAATGAAAGAATGGGGGTGCTCTGGTAAAGCAGCCTAAC
ATTATTTCTGTCATGATAACCTCTCTTCCACTTGCACGTTGTTTGTGTGGTTTCTATTTC
ACAGGAGCAGGAGCACTTCCACCAGTTGTAGGCAGCCCTACAAACACTTTGAATGAATCA
TATAGTCCCCACTGAGCTCCAGTTAGTGTTCCAATCATAACAATACGAAGCGGAAGGCCG
CGAGTGAAAAGACCCACCACCCCAATCTTCTTCACAGCATCGCCAACAGTGGCTCCCTTG
GCATTGTTAAGAAAAGAAACGAGGTTGTCAGCGGGGTGCGAGACAATGGCACAGAGTACA
CCTGCAATATATCCTGCTGCAAAACTCACTCCAAGCTGCTTATTTTGGCTGCACTGTTCT
TTAGGGGTGGGGATGACTTGTTTGTA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC021265A_C01 KMC021265A_c01
         (566 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196908.1| mitochondrial phosphate translocator; protein i...   196  2e-49
pir||T51595 phosphate transport protein, mitochondrial [imported...   196  2e-49
pir||T05707 phosphate transport protein G7, mitochondrial - soyb...   192  2e-48
dbj|BAB83689.1| mitochondrial phosphate transporter [Lotus japon...   190  9e-48
gb|AAL66293.1|AF452453_1 phosphate transporter [Glycine max]          189  2e-47

>ref|NP_196908.1| mitochondrial phosphate translocator; protein id: At5g14040.1,
           supported by cDNA: gi_16604459 [Arabidopsis thaliana]
           gi|9757785|dbj|BAB08283.1| mitochondrial phosphate
           translocator [Arabidopsis thaliana]
           gi|16604460|gb|AAL24236.1| AT5g14040/MUA22_4
           [Arabidopsis thaliana] gi|23505897|gb|AAN28808.1|
           At5g14040/MUA22_4 [Arabidopsis thaliana]
          Length = 375

 Score =  196 bits (497), Expect = 2e-49
 Identities = 94/108 (87%), Positives = 99/108 (91%)
 Frame = -1

Query: 566 YKQVIPTPKEQCSQNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 387
           YK  IP PK +CS+  QLGVSFA GY+AGV CAIVSHPADNLVSFLNNAKGATVGDAVKK
Sbjct: 259 YKYAIPNPKSECSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 318

Query: 386 IGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAP 243
           IG+VGLFTRGLPLRIVMIGTLTGAQWGLYD+FKVFVGLPTTGG APAP
Sbjct: 319 IGMVGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVAPAP 366

>pir||T51595 phosphate transport protein, mitochondrial [imported] - Arabidopsis
           thaliana (fragment) gi|3318617|dbj|BAA31585.1|
           mitochondrial phosphate transporter [Arabidopsis
           thaliana]
          Length = 288

 Score =  196 bits (497), Expect = 2e-49
 Identities = 94/108 (87%), Positives = 99/108 (91%)
 Frame = -1

Query: 566 YKQVIPTPKEQCSQNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 387
           YK  IP PK +CS+  QLGVSFA GY+AGV CAIVSHPADNLVSFLNNAKGATVGDAVKK
Sbjct: 172 YKYAIPNPKSECSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKK 231

Query: 386 IGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAP 243
           IG+VGLFTRGLPLRIVMIGTLTGAQWGLYD+FKVFVGLPTTGG APAP
Sbjct: 232 IGMVGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVAPAP 279

>pir||T05707 phosphate transport protein G7, mitochondrial - soybean
           gi|3318611|dbj|BAA31582.1| mitochondrial phosphate
           transporter [Glycine max]
          Length = 375

 Score =  192 bits (488), Expect = 2e-48
 Identities = 91/107 (85%), Positives = 100/107 (93%)
 Frame = -1

Query: 566 YKQVIPTPKEQCSQNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 387
           YK  IPTPK +C+++ QLGVSFA GY+AGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK
Sbjct: 257 YKHAIPTPKNECTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 316

Query: 386 IGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPA 246
           +G+ GLFTRGLPLRIVMIGTLTGAQWG+YD+FKVFVGLPTTGG APA
Sbjct: 317 LGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPA 363

>dbj|BAB83689.1| mitochondrial phosphate transporter [Lotus japonicus]
          Length = 356

 Score =  190 bits (483), Expect = 9e-48
 Identities = 88/107 (82%), Positives = 99/107 (92%)
 Frame = -1

Query: 566 YKQVIPTPKEQCSQNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 387
           YK  +P PK +CS+N QLG+SFA GY+AGV CAIVSHPADNLVSFLNNA+GATVGDAVKK
Sbjct: 245 YKHAVPVPKSECSKNLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAQGATVGDAVKK 304

Query: 386 IGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPA 246
           +G+ GLFTRGLPLRIVMIGTLTGAQWG+YD+FKVFVGLPTTGG+APA
Sbjct: 305 LGMWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPA 351

>gb|AAL66293.1|AF452453_1 phosphate transporter [Glycine max]
          Length = 342

 Score =  189 bits (480), Expect = 2e-47
 Identities = 91/107 (85%), Positives = 98/107 (91%)
 Frame = -1

Query: 566 YKQVIPTPKEQCSQNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 387
           YK  IPTPK +C++  QLGVSFA GYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK
Sbjct: 224 YKHAIPTPKNECTKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKK 283

Query: 386 IGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPA 246
           +G+ GLFTRGLPLRIVMIGTLTGAQWG+YD+FKV VGLPTTGG APA
Sbjct: 284 LGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVSVGLPTTGGPAPA 330

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,705,103
Number of Sequences: 1393205
Number of extensions: 11701847
Number of successful extensions: 40794
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 39406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40701
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF046g10_f BP030741 1 183
2 MF045c01_f BP030655 27 570
3 MF056e11_f BP031246 38 444




Lotus japonicus
Kazusa DNA Research Institute