Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021264A_C01 KMC021264A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189085.1| unknown protein; protein id: At3g24420.1 [Arabi... 211 4e-54
dbj|BAB91828.1| B1103C09.18 [Oryza sativa (japonica cultivar-gro... 166 1e-40
ref|NP_566220.1| expressed protein; protein id: At3g03990.1, sup... 157 6e-38
gb|AAM65892.1| unknown [Arabidopsis thaliana] 157 6e-38
ref|NP_713841.1| Predicted hydrolases or acyltransferases, alpha... 157 8e-38
>ref|NP_189085.1| unknown protein; protein id: At3g24420.1 [Arabidopsis thaliana]
gi|11994705|dbj|BAB02943.1| hydrolase-like protein
[Arabidopsis thaliana]
Length = 273
Score = 211 bits (538), Expect = 4e-54
Identities = 95/164 (57%), Positives = 130/164 (78%)
Frame = +1
Query: 52 LSSSLNAKIEGLGTETLVFAHGYGTDKSIWDKITPFFVENYRVVVFDWAFSGAVEDESLY 231
L+S++NAKI G G ++V AHG+G D+S+WDKI P ++++V+VFDW FSGA++D++LY
Sbjct: 10 LASAMNAKIIGSGERSMVLAHGFGGDQSVWDKIIPVLSQSFKVLVFDWLFSGAIKDQTLY 69
Query: 232 DPVKYSSLEAFADDLLALMDQMDLKDVTFVGHSMSGMIGCLASIQRPQLFKRLILLGASP 411
DP KY+SL+ F+DDL+ALM+++ V FVGHSMSG+IGC ASI+RP LF L+L+ ASP
Sbjct: 70 DPSKYNSLDVFSDDLIALMEELKFGPVVFVGHSMSGVIGCAASIKRPDLFTNLLLIAASP 129
Query: 412 RYINTDDYEGGFTSSDIEQLLVNIESNYENWASAFSSLVVDPND 543
RYIN++DY+GGF S DI+ ++ +I SNYE WA FSS VVD D
Sbjct: 130 RYINSEDYKGGFESKDIDTIITSIGSNYEAWAVDFSSFVVDSRD 173
>dbj|BAB91828.1| B1103C09.18 [Oryza sativa (japonica cultivar-group)]
gi|20804634|dbj|BAB92324.1| P0451D05.26 [Oryza sativa
(japonica cultivar-group)]
Length = 302
Score = 166 bits (421), Expect = 1e-40
Identities = 80/164 (48%), Positives = 109/164 (65%), Gaps = 8/164 (4%)
Frame = +1
Query: 64 LNAKIEGLGTETLVFAHGYGTDKSIWDKITPFFVENYRVVVFDWAFSG--------AVED 219
LN ++ G G TLV +HGYG ++IWD++ P E +VV+FDW FSG A E+
Sbjct: 4 LNPRVVGCGERTLVLSHGYGGSQAIWDRVLPHLAETNKVVLFDWDFSGGGGDGEKAAAEE 63
Query: 220 ESLYDPVKYSSLEAFADDLLALMDQMDLKDVTFVGHSMSGMIGCLASIQRPQLFKRLILL 399
E Y + E FAD+L+ALM++M + +VGHSM+GMIGC+ASI RP LF L+L+
Sbjct: 64 EEEY------TFEGFADELVALMEEMGVSGAVYVGHSMAGMIGCIASINRPGLFTHLVLV 117
Query: 400 GASPRYINTDDYEGGFTSSDIEQLLVNIESNYENWASAFSSLVV 531
GASPRYIN+DDYEGGF +I+ +L I S++ +WA F L+V
Sbjct: 118 GASPRYINSDDYEGGFDEPEIDAMLATISSDFLSWAKGFVPLIV 161
>ref|NP_566220.1| expressed protein; protein id: At3g03990.1, supported by cDNA:
6052., supported by cDNA: gi_17381266, supported by
cDNA: gi_20453358 [Arabidopsis thaliana]
gi|6223644|gb|AAF05858.1|AC011698_9 unknown protein
[Arabidopsis thaliana] gi|17381267|gb|AAL36052.1|
AT3g03990/T11I18_10 [Arabidopsis thaliana]
gi|20453359|gb|AAM19918.1| AT3g03990/T11I18_10
[Arabidopsis thaliana]
Length = 267
Score = 157 bits (398), Expect = 6e-38
Identities = 70/157 (44%), Positives = 110/157 (69%)
Frame = +1
Query: 61 SLNAKIEGLGTETLVFAHGYGTDKSIWDKITPFFVENYRVVVFDWAFSGAVEDESLYDPV 240
+LN ++ G G L AHG+GTD+S W I P+F +NYRVV++D +G+V + +D
Sbjct: 9 ALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPD-YFDFN 67
Query: 241 KYSSLEAFADDLLALMDQMDLKDVTFVGHSMSGMIGCLASIQRPQLFKRLILLGASPRYI 420
+Y++L+ + DDLL ++D + +++ +VGHS+S MIG +ASI+RP+LF +LIL+G SPR++
Sbjct: 68 RYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSPRFL 127
Query: 421 NTDDYEGGFTSSDIEQLLVNIESNYENWASAFSSLVV 531
N +DY GGF +IE++ +E+NYE W F+ L V
Sbjct: 128 NDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAV 164
>gb|AAM65892.1| unknown [Arabidopsis thaliana]
Length = 267
Score = 157 bits (398), Expect = 6e-38
Identities = 70/157 (44%), Positives = 110/157 (69%)
Frame = +1
Query: 61 SLNAKIEGLGTETLVFAHGYGTDKSIWDKITPFFVENYRVVVFDWAFSGAVEDESLYDPV 240
+LN ++ G G L AHG+GTD+S W I P+F +NYRVV++D +G+V + +D
Sbjct: 9 ALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPD-YFDFN 67
Query: 241 KYSSLEAFADDLLALMDQMDLKDVTFVGHSMSGMIGCLASIQRPQLFKRLILLGASPRYI 420
+Y++L+ + DDLL ++D + +++ +VGHS+S MIG +ASI+RP+LF +LIL+G SPR++
Sbjct: 68 RYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSPRFL 127
Query: 421 NTDDYEGGFTSSDIEQLLVNIESNYENWASAFSSLVV 531
N +DY GGF +IE++ +E+NYE W F+ L V
Sbjct: 128 NDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAV 164
>ref|NP_713841.1| Predicted hydrolases or acyltransferases, alpha/beta hydrolase
superfamily [Leptospira interrogans serovar lai str.
56601] gi|24197640|gb|AAN50859.1|AE011521_5 Predicted
hydrolases or acyltransferases, alpha/beta hydrolase
superfamily [Leptospira interrogans serovar lai str.
56601]
Length = 266
Score = 157 bits (397), Expect = 8e-38
Identities = 72/161 (44%), Positives = 113/161 (69%)
Frame = +1
Query: 67 NAKIEGLGTETLVFAHGYGTDKSIWDKITPFFVENYRVVVFDWAFSGAVEDESLYDPVKY 246
N KI G ET+VF+HG+G D+S W+K+ P ++YR+V+FD SG D SL+ +Y
Sbjct: 8 NLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKT-DPSLFSADRY 66
Query: 247 SSLEAFADDLLALMDQMDLKDVTFVGHSMSGMIGCLASIQRPQLFKRLILLGASPRYINT 426
S+L ++A+DL+ LMD++ +++ +VGHS+SGMIG + SI+RP+LF +L + ASPRY+N
Sbjct: 67 SNLYSYAEDLILLMDELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISASPRYLND 126
Query: 427 DDYEGGFTSSDIEQLLVNIESNYENWASAFSSLVVDPNDEP 549
+Y+GGF +D++QL +E+N+ +WA F+ L + D P
Sbjct: 127 TNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLAMGNPDRP 167
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,876,994
Number of Sequences: 1393205
Number of extensions: 10127641
Number of successful extensions: 30834
Number of sequences better than 10.0: 681
Number of HSP's better than 10.0 without gapping: 29698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30606
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
