Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021263A_C01 KMC021263A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177718.1| family II extracellular lipase 3 (EXL3); protei... 132 3e-30
dbj|BAC41809.1| putative family II lipase EXL3 [Arabidopsis thal... 132 3e-30
gb|AAO42232.1| putative family II extracellular lipase 1 (EXL1) ... 129 3e-29
ref|NP_565120.1| family II extracellular lipase 1 (EXL1); protei... 129 3e-29
pir||A96788 protein T4O12.13 [imported] - Arabidopsis thaliana g... 123 1e-27
>ref|NP_177718.1| family II extracellular lipase 3 (EXL3); protein id: At1g75900.1,
supported by cDNA: gi_15054385 [Arabidopsis thaliana]
gi|15054386|gb|AAK30018.1| family II lipase EXL3
[Arabidopsis thaliana]
Length = 364
Score = 132 bits (332), Expect = 3e-30
Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = -2
Query: 535 YNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTG 356
YNEAA+LFNSKLS ++ SL + P + +YI++Y+PL DII N YG+ V +KGCCGTG
Sbjct: 254 YNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTG 313
Query: 355 LIEVVFLCNRLVPT-CPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDFV 206
IEV LCN++ + CP+V +VFWDS+HPTE YK +V+ ++ K+V FV
Sbjct: 314 AIEVAVLCNKITSSVCPDVSTHVFWDSYHPTEKTYKVLVSLLINKFVNQFV 364
>dbj|BAC41809.1| putative family II lipase EXL3 [Arabidopsis thaliana]
Length = 364
Score = 132 bits (332), Expect = 3e-30
Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = -2
Query: 535 YNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTG 356
YNEAA+LFNSKLS ++ SL + P + +YI++Y+PL DII N YG+ V +KGCCGTG
Sbjct: 254 YNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTG 313
Query: 355 LIEVVFLCNRLVPT-CPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDFV 206
IEV LCN++ + CP+V +VFWDS+HPTE YK +V+ ++ K+V FV
Sbjct: 314 AIEVAVLCNKITSSVCPDVSTHVFWDSYHPTEKTYKVLVSLLINKFVNQFV 364
>gb|AAO42232.1| putative family II extracellular lipase 1 (EXL1) [Arabidopsis
thaliana] gi|28827430|gb|AAO50559.1| putative family II
extracellular lipase 1 (EXL1) [Arabidopsis thaliana]
Length = 374
Score = 129 bits (323), Expect = 3e-29
Identities = 58/110 (52%), Positives = 82/110 (73%), Gaps = 1/110 (0%)
Frame = -2
Query: 535 YNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTG 356
+N+AA+LFN+KLS + L++ + ++YID+Y+PLLD+I+N +YG+ V +KGCCGTG
Sbjct: 264 FNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTG 323
Query: 355 LIEVVFLCNRLVPT-CPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDF 209
LIEV LCN + CP +YVFWDSFHPTE AY+ IVA +L++Y+ F
Sbjct: 324 LIEVTALCNNYTASVCPIRSDYVFWDSFHPTEKAYRIIVAKLLDRYLNRF 373
>ref|NP_565120.1| family II extracellular lipase 1 (EXL1); protein id: At1g75880.1,
supported by cDNA: gi_15054381 [Arabidopsis thaliana]
gi|15054382|gb|AAK30016.1| family II lipase EXL1
[Arabidopsis thaliana]
Length = 375
Score = 129 bits (323), Expect = 3e-29
Identities = 58/110 (52%), Positives = 82/110 (73%), Gaps = 1/110 (0%)
Frame = -2
Query: 535 YNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTG 356
+N+AA+LFN+KLS + L++ + ++YID+Y+PLLD+I+N +YG+ V +KGCCGTG
Sbjct: 265 FNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTG 324
Query: 355 LIEVVFLCNRLVPT-CPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDF 209
LIEV LCN + CP +YVFWDSFHPTE AY+ IVA +L++Y+ F
Sbjct: 325 LIEVTALCNNYTASVCPIRSDYVFWDSFHPTEKAYRIIVAKLLDRYLNRF 374
>pir||A96788 protein T4O12.13 [imported] - Arabidopsis thaliana
gi|8778808|gb|AAF79815.1|AC007396_8 T4O12.13
[Arabidopsis thaliana]
Length = 730
Score = 123 bits (309), Expect = 1e-27
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Frame = -2
Query: 535 YNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTG 356
YNEAA+LFNSKLS ++ SL + P + +YI++Y+PL DII N YG+ V +KGCCGTG
Sbjct: 303 YNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTG 362
Query: 355 LIEVVFLCNRLVPT-CPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDFV*ALFLYG 185
IEV LCN++ + CP+V +VFWDS+HPTE YK + + E V AL +G
Sbjct: 363 AIEVAVLCNKITSSVCPDVSTHVFWDSYHPTEKTYKGLFEYMDEYAVNGSFPALLAFG 420
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = -2
Query: 532 NEAAELFNSKLSKEMKSLNQK--YPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGT 359
N AE +N KL KS ++ + ++ VY+D+YN L+D+I N+++YG++ E GCC
Sbjct: 629 NRVAEQYNGKLRSGTKSWGREAGFRGAKFVYVDMYNTLMDVIKNYRRYGFSNEKNGCC-- 686
Query: 358 GLIEVVFLCNRLVPTCPNVLEYVFWDSFHPTESAYKKIVAPILE 227
+ ++P CPN +YVF+D HP+E AY+ I +++
Sbjct: 687 ------CMITAIIP-CPNPDKYVFYDFVHPSEKAYRTISKKLVQ 723
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 439,972,785
Number of Sequences: 1393205
Number of extensions: 9495712
Number of successful extensions: 21954
Number of sequences better than 10.0: 247
Number of HSP's better than 10.0 without gapping: 21166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21796
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
