>KMC021262A_C01 KMC021262A_c01
agttcaggacaagttttattaggatgaattcTTCAACTTAACACAGGCTGCCAACCTCAG
AAACCAACTCCAAGTTAATATCCACATACTTTATTTTTTGCTACTACGGAAAATTACAAG
AAAAAACAACACTAAATAGGGAACCGAGAATCCCAAAGCAGTAAAGGTTCCAGTTCTACC
AAAGGCCTCTCCAAGCTCCGCACACAAGCTAGGGAAAAAGAAGCACCTGCTCGCGCCAAG
GCATCTGCCGGAGCATTCGCATCTCTACTGATACCATCAAGCACAACTCTTAATACGGCG
AAACCAAGCTTTCAACATAATCCAAGGCTAAGTACCAAGAAAATTTGTACCGACAAAATT
CTCTATTTGTAGTTGTAGGTTGCTCAAATGTGTTGGAGCTCCTGTTATAGAGTATTGCTT
GACGACCAACCGCCAATACCAGTGTATCACCATTGTAAAATAATCGATAGGCATAACTTA
ATGGATGAAGGAAACACTCTTTATGATGAGTGAATGGTGAAAGGCGACGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC021262A_C01 KMC021262A_c01
         (530 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB15778.1| FLJ00087 protein [Homo sapiens]                        35  0.55
ref|XP_029084.4| similar to FLJ00087 protein [Homo sapiens]            35  0.55
ref|NP_511060.2| swallow CG3429-PA gi|730853|sp|P40688|SWA_DROME...    34  1.2
gb|ZP_00107621.1| hypothetical protein [Nostoc punctiforme]            33  2.1
gb|AAH30281.1| hypothetical protein FLJ21438 [Homo sapiens]            33  2.7

>dbj|BAB15778.1| FLJ00087 protein [Homo sapiens]
          Length = 674

 Score = 35.0 bits (79), Expect = 0.55
 Identities = 21/57 (36%), Positives = 32/57 (55%), Gaps = 3/57 (5%)
 Frame = +2

Query: 152 PKAVKVPV---LPKASPSSAHKLGKKKHLLAPRHLPEHSHLY*YHQAQLLIRRNQAF 313
           P  V VP+   LP A   S+   G+K   LAPR LP+H+ L    Q+   +RR++++
Sbjct: 472 PVLVSVPMRLPLPPAQVHSSLSAGEKPGFLAPRDLPKHTPLISKSQSLRSVRRSESW 528

>ref|XP_029084.4| similar to FLJ00087 protein [Homo sapiens]
          Length = 478

 Score = 35.0 bits (79), Expect = 0.55
 Identities = 21/57 (36%), Positives = 32/57 (55%), Gaps = 3/57 (5%)
 Frame = +2

Query: 152 PKAVKVPV---LPKASPSSAHKLGKKKHLLAPRHLPEHSHLY*YHQAQLLIRRNQAF 313
           P  V VP+   LP A   S+   G+K   LAPR LP+H+ L    Q+   +RR++++
Sbjct: 276 PVLVSVPMRLPLPPAQVHSSLSAGEKPGFLAPRDLPKHTPLISKSQSLRSVRRSESW 332

>ref|NP_511060.2| swallow CG3429-PA gi|730853|sp|P40688|SWA_DROME Swallow protein
           gi|103178|pir||S20806 swallow protein - fruit fly
           (Drosophila melanogaster) gi|8684|emb|CAA39500.1|
           swallow [Drosophila melanogaster]
           gi|17862310|gb|AAL39632.1| LD21771p [Drosophila
           melanogaster] gi|22831818|gb|AAF46160.3| CG3429-PA
           [Drosophila melanogaster]
          Length = 548

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 21/78 (26%), Positives = 37/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 101 LLRKITRKNN--TK*GTENPKAVKVPVLPKASPSSAHKLGKKKHLLAPRHLPEHSHLY*Y 274
           L+R+    NN  T   + N  A++V    +  PSS  +  ++  L++PR   +H  +Y +
Sbjct: 382 LVRRTPAPNNSETSQPSSNDSAIEVEAHEEERPSSRRQWEQQGELISPRQWGQHEGMYYF 441

Query: 275 HQAQLLIRRNQAFNIIQG 328
            +    +     FNI QG
Sbjct: 442 DKRNNRVIEVMGFNISQG 459

>gb|ZP_00107621.1| hypothetical protein [Nostoc punctiforme]
          Length = 851

 Score = 33.1 bits (74), Expect = 2.1
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
 Frame = +1

Query: 28  ILQLNTGCQPQKPTPS*YPHTLFFATTENYKKKQH*IGNRESQSSK----GSSSTKGLSK 195
           +L L T  QP+K T           +++N K + +  G  E Q S+      ++   +  
Sbjct: 37  VLTLGTNQQPEKDTSQ-------LDSSKNLKSRSNLTGIIEEQKSRIVAVYPANPAAMPA 89

Query: 196 LRTQAREKEAPARAKASAGAFASLLIPSSTTLNTAKPSFQHNP 324
           + T+ R + A   A A+ G    +++P+STTL TA+ + Q NP
Sbjct: 90  VVTE-RSRSAGGHAYATPG----VIVPTSTTLKTAQQTPQINP 127

>gb|AAH30281.1| hypothetical protein FLJ21438 [Homo sapiens]
          Length = 264

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 17/46 (36%), Positives = 27/46 (57%)
 Frame = +2

Query: 176 LPKASPSSAHKLGKKKHLLAPRHLPEHSHLY*YHQAQLLIRRNQAF 313
           LP A   S+   G+K   LAPR LP+H+ L    Q+   +RR++++
Sbjct: 5   LPPAQVHSSLSAGEKPGFLAPRDLPKHTPLISKSQSLRSVRRSESW 50

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 442,610,294
Number of Sequences: 1393205
Number of extensions: 9271772
Number of successful extensions: 23569
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23551
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MF060d07_f BP031464 1 530 2 MF040h03_f BP030409 32 529

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