Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021257A_C01 KMC021257A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566065.1| expressed protein; protein id: At2g46170.1, sup... 141 4e-33
ref|NP_194094.1| putative protein; protein id: At4g23630.1, supp... 133 1e-30
dbj|BAB32723.1| P0492F05.25 [Oryza sativa (japonica cultivar-gro... 128 4e-29
ref|NP_192861.1| putative protein; protein id: At4g11220.1, supp... 126 1e-28
ref|NP_198975.1| putative protein; protein id: At5g41600.1, supp... 125 4e-28
>ref|NP_566065.1| expressed protein; protein id: At2g46170.1, supported by cDNA:
gi_15450758, supported by cDNA: gi_18491130 [Arabidopsis
thaliana] gi|25408969|pir||E84899 hypothetical protein
At2g46170 [imported] - Arabidopsis thaliana
gi|3702332|gb|AAC62889.1| expressed protein [Arabidopsis
thaliana] gi|15450759|gb|AAK96651.1| At2g46170/T3F17.18
[Arabidopsis thaliana] gi|18491131|gb|AAL69534.1|
At2g46170/T3F17.18 [Arabidopsis thaliana]
Length = 255
Score = 141 bits (356), Expect = 4e-33
Identities = 68/102 (66%), Positives = 84/102 (81%)
Frame = -3
Query: 526 SAIRVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLP 347
S++R E+NQAFV+LR I GRD+KKFL V+ LW++SVVGNWFNFLTL YI FV L T+P
Sbjct: 148 SSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVP 207
Query: 346 LIYEKYEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIPGLK 221
++YEK+ED+VD LAEKAM E++KQY V D KVLS+IPI LK
Sbjct: 208 MLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLK 249
>ref|NP_194094.1| putative protein; protein id: At4g23630.1, supported by cDNA:
39185., supported by cDNA: gi_15215585 [Arabidopsis
thaliana] gi|7486733|pir||T05595 hypothetical protein
F9D16.100 - Arabidopsis thaliana
gi|4454032|emb|CAA23029.1| putative protein [Arabidopsis
thaliana] gi|7269211|emb|CAB79318.1| putative protein
[Arabidopsis thaliana] gi|15215586|gb|AAK91338.1|
AT4g23630/F9D16_100 [Arabidopsis thaliana]
gi|21593466|gb|AAM65433.1| unknown [Arabidopsis
thaliana] gi|22137240|gb|AAM91465.1| AT4g23630/F9D16_100
[Arabidopsis thaliana]
Length = 275
Score = 133 bits (334), Expect = 1e-30
Identities = 66/102 (64%), Positives = 81/102 (78%)
Frame = -3
Query: 526 SAIRVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLP 347
S +R+EIN+ F LR+I +GRD+KKFL I LWV+S++G FNFLTL YI V LFT+P
Sbjct: 169 SGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVP 228
Query: 346 LIYEKYEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIPGLK 221
L Y+KYED+VD L EKAMIE+KKQYAVLD KVLS+IP+ LK
Sbjct: 229 LAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLK 270
>dbj|BAB32723.1| P0492F05.25 [Oryza sativa (japonica cultivar-group)]
gi|20804416|dbj|BAB92114.1| P0443E07.17 [Oryza sativa
(japonica cultivar-group)]
Length = 279
Score = 128 bits (322), Expect = 4e-29
Identities = 65/99 (65%), Positives = 78/99 (78%)
Frame = -3
Query: 517 RVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLPLIY 338
R EIN+AF LRQI GRDIKKFL VI LW++SV+G+ NFLTL YI FV L T+P++Y
Sbjct: 177 RYEINRAFANLRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLTLVYIVFVVLHTVPILY 236
Query: 337 EKYEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIPGLK 221
EKYEDQ+D+ EK +EIKKQYAVLDAKVLS++P LK
Sbjct: 237 EKYEDQIDSYGEKGWVEIKKQYAVLDAKVLSKVPRGPLK 275
>ref|NP_192861.1| putative protein; protein id: At4g11220.1, supported by cDNA:
23536., supported by cDNA: gi_14334419, supported by
cDNA: gi_15081760, supported by cDNA: gi_16209686
[Arabidopsis thaliana] gi|7486694|pir||T13013
hypothetical protein F8L21.10 - Arabidopsis thaliana
gi|5596468|emb|CAB51406.1| putative protein [Arabidopsis
thaliana] gi|7267821|emb|CAB81223.1| putative protein
[Arabidopsis thaliana] gi|14334420|gb|AAK59408.1|
unknown protein [Arabidopsis thaliana]
gi|15081761|gb|AAK82535.1| AT4g11220/F8L21_10
[Arabidopsis thaliana] gi|16209687|gb|AAL14401.1|
AT4g11220/F8L21_10 [Arabidopsis thaliana]
gi|21592415|gb|AAM64366.1| unknown [Arabidopsis
thaliana] gi|26983898|gb|AAN86201.1| unknown protein
[Arabidopsis thaliana]
Length = 271
Score = 126 bits (317), Expect = 1e-28
Identities = 63/102 (61%), Positives = 79/102 (76%)
Frame = -3
Query: 526 SAIRVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLP 347
S +R+EIN+ LR+I +GRDIKKFLS I LWV+S++G ++FLTL YI V LFT+P
Sbjct: 165 SGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVP 224
Query: 346 LIYEKYEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIPGLK 221
L Y+KYED+VD+ EKAM E+KKQYAVLDAKV S+IP LK
Sbjct: 225 LFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLK 266
>ref|NP_198975.1| putative protein; protein id: At5g41600.1, supported by cDNA:
gi_14334529, supported by cDNA: gi_16323068 [Arabidopsis
thaliana] gi|10178014|dbj|BAB11466.1| contains
similarity to 24 kDa seed maturation
protein~gene_id:MBK23.13 [Arabidopsis thaliana]
gi|14334530|gb|AAK59673.1| unknown protein [Arabidopsis
thaliana] gi|16323069|gb|AAL15269.1| AT5g41600/MBK23_13
[Arabidopsis thaliana] gi|23297540|gb|AAN12890.1|
unknown protein [Arabidopsis thaliana]
Length = 257
Score = 125 bits (313), Expect = 4e-28
Identities = 63/107 (58%), Positives = 81/107 (74%), Gaps = 4/107 (3%)
Frame = -3
Query: 526 SAIRVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLP 347
S +R+EIN+ +LR I +G+D+KKF+ VI LWV+S++G+ +NFLTLFY V LFT+P
Sbjct: 148 SGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIP 207
Query: 346 LIYEKYEDQVDALAEKAMIEIKKQYAVLDAKVL----SQIPIPGLKK 218
++YEKYED+VDA EKAM EIKKQYAVLD KVL S+IP L K
Sbjct: 208 VLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNK 254
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,477,459
Number of Sequences: 1393205
Number of extensions: 8046573
Number of successful extensions: 21570
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 20776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21530
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
