Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020712A_C01 KMC020712A_c01
(548 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197446.1| calcium-dependent protein kinase; protein id: A... 100 1e-20
ref|NP_568281.1| calcium-dependent protein kinase-like protein; ... 100 1e-20
dbj|BAC55673.1| putative calcium-dependent protein kinase [Oryza... 98 7e-20
gb|AAB88537.1| calcium-dependent protein kinase [Fragaria x anan... 97 1e-19
pir||H86322 calcium-dependent protein kinase 1 [imported] - Arab... 94 1e-18
>ref|NP_197446.1| calcium-dependent protein kinase; protein id: At5g19450.1,
supported by cDNA: gi_836941 [Arabidopsis thaliana]
gi|2129551|pir||S71778 calcium-dependent protein kinase
(EC 2.7.1.-) 19 - Arabidopsis thaliana
gi|836942|gb|AAA67655.1| calcium-dependent protein
kinase [Arabidopsis thaliana] gi|836948|gb|AAA67658.1|
calcium-dependent protein kinase [Arabidopsis thaliana]
Length = 533
Score = 100 bits (249), Expect = 1e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = -3
Query: 546 MHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKDGALPI 385
M DVDTDKDGRISY+EFAAMMKAGTDWRKASRQYSRERFNSLSLKLM++G+L +
Sbjct: 476 MQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQL 529
>ref|NP_568281.1| calcium-dependent protein kinase-like protein; protein id:
At5g12480.1, supported by cDNA: gi_13605616, supported
by cDNA: gi_1399276 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247.1| calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|13605617|gb|AAK32802.1|AF361634_1 AT5g19450/F7K24_200
[Arabidopsis thaliana] gi|14586378|emb|CAC42909.1|
calcium-dependent protein kinase-like protein
[Arabidopsis thaliana]
Length = 535
Score = 100 bits (249), Expect = 1e-20
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -3
Query: 546 MHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKDGALPI 385
M DVDTDKDGRISY+EF AMMKAGTDWRKASRQYSRERFNSLSLKLM+DG+L +
Sbjct: 478 MQDVDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQL 531
>dbj|BAC55673.1| putative calcium-dependent protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 547
Score = 97.8 bits (242), Expect = 7e-20
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = -3
Query: 546 MHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKDGALPI 385
+ DVDTDKDG+ISYDEFAAMMKAGTDWRKASRQYSRERF SLSLKL KDG+L +
Sbjct: 490 IRDVDTDKDGKISYDEFAAMMKAGTDWRKASRQYSRERFTSLSLKLQKDGSLQL 543
>gb|AAB88537.1| calcium-dependent protein kinase [Fragaria x ananassa]
Length = 529
Score = 97.1 bits (240), Expect = 1e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 540 DVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKDGAL 391
DVDTDKDG+ISY+EFA MMKAGTDWRKASRQYSRERFNSLSLKLM+DG+L
Sbjct: 473 DVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSL 522
>pir||H86322 calcium-dependent protein kinase 1 [imported] - Arabidopsis
thaliana gi|6730697|gb|AAF27092.1|AC011809_1
calcium-dependent protein kinase 1 [Arabidopsis
thaliana]
Length = 545
Score = 94.0 bits (232), Expect = 1e-18
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = -3
Query: 546 MHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKDGALPIN 382
M +VDTDKDGRI+YDEF MMKAGTDWRKASRQYSRERF SLS+ LMKDG+L ++
Sbjct: 481 MREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLHLH 535
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,428,040
Number of Sequences: 1393205
Number of extensions: 10708934
Number of successful extensions: 27636
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 26657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27610
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
