Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020593A_C01 KMC020593A_c01
(492 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK09233.1|AC084320_20 putative fatty acid hydroxylase [Oryza... 95 4e-19
ref|NP_193819.1| fatty acid hydroxylase - like protein; protein ... 91 7e-18
ref|NP_181023.1| fatty acid hydroxylase (FAH1); protein id: At2g... 86 2e-16
gb|AAL68319.1| RE63157p [Drosophila melanogaster] gi|25012755|gb... 61 8e-09
gb|EAA26643.1| hypothetical protein [Neurospora crassa] 60 1e-08
>gb|AAK09233.1|AC084320_20 putative fatty acid hydroxylase [Oryza sativa (japonica
cultivar-group)]
Length = 237
Score = 95.1 bits (235), Expect = 4e-19
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -2
Query: 491 DCTHYYLHHGQPKTEVPRSLKKYHLNHHYRLQSYGFGITSPLWDKVFGTVPP 336
DCTHYYLHHGQP E ++LK+YHLNHH+R+Q+ GFGITS LWD VFGT+PP
Sbjct: 178 DCTHYYLHHGQPSKEPAKNLKRYHLNHHFRIQNKGFGITSSLWDYVFGTLPP 229
>ref|NP_193819.1| fatty acid hydroxylase - like protein; protein id: At4g20870.1,
supported by cDNA: gi_14994242, supported by cDNA:
gi_16648749, supported by cDNA: gi_20856314 [Arabidopsis
thaliana] gi|7486980|pir||T10629 hypothetical protein
T13K14.30 - Arabidopsis thaliana
gi|5262777|emb|CAB45882.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|7268883|emb|CAB79087.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|14994243|gb|AAK73256.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|16648750|gb|AAL25567.1| AT4g20870/T13K14_30
[Arabidopsis thaliana] gi|20856315|gb|AAM26659.1|
AT4g20870/T13K14_30 [Arabidopsis thaliana]
Length = 237
Score = 90.9 bits (224), Expect = 7e-18
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -2
Query: 491 DCTHYYLHHGQPKTEVPRSLKKYHLNHHYRLQSYGFGITSPLWDKVFGTVPPPLKADAK 315
D THYYLHHGQPK + LKKYHLNHH+R+Q G+GITS LWDKVFGT+ P +KA AK
Sbjct: 178 DITHYYLHHGQPKEPTFKHLKKYHLNHHFRIQDKGYGITSSLWDKVFGTL-PGIKAAAK 235
>ref|NP_181023.1| fatty acid hydroxylase (FAH1); protein id: At2g34770.1, supported
by cDNA: gi_15215595, supported by cDNA: gi_2736146
[Arabidopsis thaliana] gi|7484965|pir||T01359 fatty acid
hydroxylase (EC 1.14.15.-) FAH1 - Arabidopsis thaliana
gi|2736147|gb|AAB94072.1| fatty acid hydroxylase Fah1p
[Arabidopsis thaliana] gi|3132481|gb|AAC16270.1| fatty
acid hydroxylase (FAH1) [Arabidopsis thaliana]
gi|15215596|gb|AAK91343.1| At2g34770/T29F13.2
[Arabidopsis thaliana] gi|23308163|gb|AAN18051.1|
At2g34770/T29F13.2 [Arabidopsis thaliana]
Length = 237
Score = 86.3 bits (212), Expect = 2e-16
Identities = 36/51 (70%), Positives = 41/51 (79%)
Frame = -2
Query: 491 DCTHYYLHHGQPKTEVPRSLKKYHLNHHYRLQSYGFGITSPLWDKVFGTVP 339
D THYYLHH QP V ++LKKYHLNHH+R+Q GFGITS LWD VFGT+P
Sbjct: 178 DVTHYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTLP 228
>gb|AAL68319.1| RE63157p [Drosophila melanogaster] gi|25012755|gb|AAN71470.1|
RE68078p [Drosophila melanogaster]
Length = 355
Score = 60.8 bits (146), Expect = 8e-09
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = -2
Query: 491 DCTHYYLHHGQPKTEVPRSLKKYHLNHHYRLQSYGFGITSPLWDKVFGT 345
D HYYLH+G P +K+YH +HH+ Q+ G+GI+SPLWD VF T
Sbjct: 293 DMMHYYLHYGNPSLWAFVHMKRYHHHHHFSHQTLGYGISSPLWDVVFKT 341
>gb|EAA26643.1| hypothetical protein [Neurospora crassa]
Length = 371
Score = 60.5 bits (145), Expect = 1e-08
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = -2
Query: 491 DCTHYYLHHGQPKTEVPRSLKKYHLNHHYRLQSYGFGITSPLWDKVFGT 345
D THY+LHH Q + LKKYHL HH+ GFG+TS WDK+FGT
Sbjct: 315 DMTHYFLHH-QNLPAYYKELKKYHLAHHFLDYENGFGVTSAFWDKIFGT 362
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 409,196,376
Number of Sequences: 1393205
Number of extensions: 8262697
Number of successful extensions: 18147
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 17727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18124
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
