KMC020581A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC020581A_C01 KMC020581A_c01
ggaGACAACAATAGTTTAGAGTTTATTTCTCAAACATATAAAAGTACAATTAATCATCAA
ATACTAAGAACAAAGTTTATAAATATATATGTATGATGGGTTTTTTGTAATTTTATGTTT
CGGATATCTTTGGGTTTGGGTTCGGGCGGGTATGGGCACGGATTTAACTAATACCAAACT
CAAACCCATAAACTGCTATAGTAACGGGCAAAACTCAAATCCAGTCAACTCGGGTTTTGT
CCTTCAAATCGGATCGGGTTCATGCGGGTACCCATGAATTTGGGCAAAAGTGTCATCCCT
ACAACAGAGTGATGGGTGGCAACAATCTGCACAATTTGGAATCAATGAAACAAAGTGGTA
TTTAGAGACTCACAAACTGTTTATTCAATTAGTTGTTTTGGTTGGAACCGCCAGGACTGG
TTGAGTCTTTTCTAAGGTAAGTCCAAATGTTTCATCCATATCCATATCCTCTGGTTTGAT
TCCACCTTCAAGCTCCCAATTGAAGCAATTGATAAGCAAACCCAACATCAAGAACAACAG
TCTTATTGCCAATGGTAAGCCAGGACATATTCTTCTCCCAGCGCCAAATGGTGTCAACTC
AAAACTTCTACCCTTAAAGTCAATTTCTGACCCCAAGAATCTCTCTGGTGAAAACAAATT
TGGATTATCCCATAAATTTGGATCTCTCCCATTAGCCCATACATTAACCAGAACTTGTGA
ACCTTTCGGGATCGTATAACCGTGCATATCTAAATCTACTTCGGCTTGTCGAGGGAGTAA
AAGTGGGACTGCTGGGTGCAACCGAAAAATCTCTTTAACAATTGCTTGCAAGTAAGGGAG
TCTCTCAATGTGTGATTCTTCAACTAGCTTGCCTTTGCCAATAGTTT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC020581A_C01 KMC020581A_c01
         (887 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB56741.1| cytochrome P450 monooxygenase [Cicer arietinum]       229  4e-59
emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vi...   227  2e-58
ref|NP_182081.1| cytochrome p450 family; protein id: At2g45570.1...   222  5e-57
emb|CAC80883.1| geraniol 10-hydroxylase [Catharanthus roseus]         219  3e-56
ref|NP_182079.1| cytochrome p450 family; protein id: At2g45550.1...   219  6e-56

>emb|CAB56741.1| cytochrome P450 monooxygenase [Cicer arietinum]
          Length = 437

 Score =  229 bits (584), Expect = 4e-59
 Identities = 104/163 (63%), Positives = 130/163 (78%)
 Frame = -3

Query: 885 TIGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLV 706
           T+GKG  VEE+ I +LPY+QA++KE FRLHP VPLLLPR+AE+D+ +  Y IPK +Q+L+
Sbjct: 273 TVGKGIPVEETDIAKLPYMQAVIKETFRLHPPVPLLLPRRAEIDVKIGDYVIPKDAQILI 332

Query: 705 NVWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLM 526
           N W  GRDP  W+NPN+F PERFL SEID KG  FEL PFG+GRR CPGLPLAIR+L LM
Sbjct: 333 NAWVVGRDPTKWENPNVFIPERFLDSEIDIKGHHFELIPFGSGRRTCPGLPLAIRMLPLM 392

Query: 525 LGLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPTK 397
           LG L+NCF+W+LE G+  ED + ++ FG+TLEK+QPV  VPTK
Sbjct: 393 LGSLVNCFDWKLEDGLNVEDFNKEDEFGITLEKSQPVRIVPTK 435

>emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera]
          Length = 499

 Score =  227 bits (579), Expect = 2e-58
 Identities = 103/163 (63%), Positives = 133/163 (81%)
 Frame = -3

Query: 885 TIGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLV 706
           TIG+ K V+ES I RLPYLQA+VKE FRLHPAVP LLPR+ E D D+ G+ +PK +QVLV
Sbjct: 336 TIGQDKQVKESDISRLPYLQAVVKETFRLHPAVPFLLPRRVEGDADIDGFAVPKNAQVLV 395

Query: 705 NVWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLM 526
           N WA GRDPN W+NPN F PERFLG ++D KG++FEL PFGAGRRICPGLPLAIR++ LM
Sbjct: 396 NAWAIGRDPNTWENPNSFVPERFLGLDMDVKGQNFELIPFGAGRRICPGLPLAIRMVHLM 455

Query: 525 LGLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPTK 397
           L  LI+ ++W+LE G+ PE+M+M+E +G++L+K QP+ A+P +
Sbjct: 456 LASLIHSYDWKLEDGVTPENMNMEERYGISLQKAQPLQALPVR 498

>ref|NP_182081.1| cytochrome p450 family; protein id: At2g45570.1, supported by cDNA:
           gi_17065047 [Arabidopsis thaliana]
           gi|5915832|sp|O64637|C7C2_ARATH Cytochrome P450 76C2
           gi|7430675|pir||T00870 probable cytochrome P450
           At2g45570 [imported] - Arabidopsis thaliana
           gi|2979549|gb|AAC06158.1| putative cytochrome P450
           [Arabidopsis thaliana] gi|17065048|gb|AAL32678.1|
           putative cytochrome P450 [Arabidopsis thaliana]
           gi|21387151|gb|AAM47979.1| putative cytochrome P450
           [Arabidopsis thaliana]
          Length = 512

 Score =  222 bits (566), Expect = 5e-57
 Identities = 103/162 (63%), Positives = 129/162 (79%)
 Frame = -3

Query: 882 IGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLVN 703
           IG+  +VEES I  LPYLQA+VKE FRLHPA PLL+PR+AE D+++ G+ +PK +QV VN
Sbjct: 346 IGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVN 405

Query: 702 VWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLML 523
           VWA GRDPN+W+N + F PERFLG +ID +GR +ELTPFGAGRRICPGLPLA++ + LML
Sbjct: 406 VWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLML 465

Query: 522 GLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPTK 397
             L+  F+W+L  G+  ED+DMDETFGLTL KT P+ AVP K
Sbjct: 466 ASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPVK 507

>emb|CAC80883.1| geraniol 10-hydroxylase [Catharanthus roseus]
          Length = 493

 Score =  219 bits (559), Expect = 3e-56
 Identities = 98/161 (60%), Positives = 127/161 (78%)
 Frame = -3

Query: 882 IGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLVN 703
           IG+GK +EES I RLPYL+ ++KE  R+HP VP L+PR+ E  +++ GY +PKGSQVLVN
Sbjct: 331 IGRGKTIEESDINRLPYLRCVMKETLRIHPPVPFLIPRKVEQSVEVCGYNVPKGSQVLVN 390

Query: 702 VWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLML 523
            WA GRD  +WD+   F PERF+ SE+D +GR FEL PFGAGRRICPGLPLA+R + LML
Sbjct: 391 AWAIGRDETVWDDALAFKPERFMESELDIRGRDFELIPFGAGRRICPGLPLALRTVPLML 450

Query: 522 GLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPT 400
           G L+N FNW+LEGG+ P+D+DM+E FG+TL+K  P+ AVP+
Sbjct: 451 GSLLNSFNWKLEGGMAPKDLDMEEKFGITLQKAHPLRAVPS 491

>ref|NP_182079.1| cytochrome p450 family; protein id: At2g45550.1 [Arabidopsis
           thaliana] gi|5915834|sp|O64635|C7C4_ARATH Cytochrome
           P450 76C4 gi|7430677|pir||T00868 probable cytochrome
           P450 [imported] - Arabidopsis thaliana
           gi|2979547|gb|AAC06156.1| putative cytochrome P450
           [Arabidopsis thaliana]
          Length = 511

 Score =  219 bits (557), Expect = 6e-56
 Identities = 97/162 (59%), Positives = 129/162 (78%)
 Frame = -3

Query: 882 IGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLVN 703
           +G+  +V+ES I  LPYLQA+VKE FRLHPA PLL+PR+AE D+++ G+ +PK +QVLVN
Sbjct: 345 LGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVN 404

Query: 702 VWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLML 523
           VWA GRDP++W+NP+ F PERF+G +ID KGR +ELTPFG GRRICPGLPLA++ + LML
Sbjct: 405 VWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLML 464

Query: 522 GLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPTK 397
             L+  F+W+L  G+  ED+DMDETFG+TL +T  + A+P K
Sbjct: 465 ASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPVK 506

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 822,553,928
Number of Sequences: 1393205
Number of extensions: 19933842
Number of successful extensions: 54906
Number of sequences better than 10.0: 3060
Number of HSP's better than 10.0 without gapping: 49619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52272
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 48218255001
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF032f12_f BP029990 1 379
2 MF020a01_f BP029288 4 499
3 MF045c04_f BP030657 21 488
4 MF013g01_f BP028938 361 888




Lotus japonicus
Kazusa DNA Research Institute