Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020480A_C01 KMC020480A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567972.1| subtilisin-like serine protease; protein id: At... 121 5e-27
pir||T06579 subtilisin-like proteinase (EC 3.4.21.-) p69e - toma... 75 6e-13
pir||T06577 subtilisin-like proteinase (EC 3.4.21.-) - tomato gi... 75 6e-13
ref|NP_193895.1| subtilisin-like protease; protein id: At4g21640... 75 7e-13
ref|NP_567632.1| subtilisin-like serine protease; protein id: At... 74 1e-12
>ref|NP_567972.1| subtilisin-like serine protease; protein id: At4g34980.1, supported
by cDNA: gi_18389255, supported by cDNA: gi_20465268
[Arabidopsis thaliana] gi|7435658|pir||T05768
subtilisin-like proteinase (EC 3.4.21.-) - Arabidopsis
thaliana gi|2924509|emb|CAA17763.1| subtilisin
proteinase-like [Arabidopsis thaliana]
gi|7270449|emb|CAB80215.1| subtilisin proteinase-like
[Arabidopsis thaliana] gi|18389256|gb|AAL67071.1|
putative subtilisin serine protease [Arabidopsis
thaliana] gi|20465269|gb|AAM19998.1| putative subtilisin
serine proteinase [Arabidopsis thaliana]
Length = 764
Score = 121 bits (304), Expect = 5e-27
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = -1
Query: 555 KGLTTKTFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAE 376
+GL +KT IRT TNVG A +VYR +ES +GVTVTVKP RLVF+ AVK+RSY VTV
Sbjct: 668 RGLVSKTVIRTATNVGQAEAVYRARIESP-RGVTVTVKPPRLVFTSAVKRRSYAVTVTVN 726
Query: 375 TRFLKMGPSGAVFGSLTWTD-GKHVVRSPIVVTQIEPL 265
TR + +G +GAVFGS+TW D GKHVVRSPIVVTQ++ L
Sbjct: 727 TRNVVLGETGAVFGSVTWFDGGKHVVRSPIVVTQMDTL 764
>pir||T06579 subtilisin-like proteinase (EC 3.4.21.-) p69e - tomato
gi|3183989|emb|CAA06413.1| P69E protein [Lycopersicon
esculentum]
Length = 754
Score = 75.1 bits (183), Expect = 6e-13
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = -1
Query: 552 GLTTKTFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAET 373
G T +TF RTVTNVG A S Y V + S KGV V VKP +L+FSE +K +Y VT + T
Sbjct: 658 GSTPQTFTRTVTNVGDAKSSYTVQIASP-KGVVVKVKPRKLIFSELKQKLTYQVTFSKRT 716
Query: 372 RFLKMGPSGAVFGSLTWTDGKHVVRSPIVV 283
K SG G L W K+ VRSPI V
Sbjct: 717 NSSK---SGVFEGFLKWNSNKYSVRSPIAV 743
>pir||T06577 subtilisin-like proteinase (EC 3.4.21.-) - tomato
gi|3183979|emb|CAA06412.1| P69C protein [Lycopersicon
esculentum]
Length = 754
Score = 75.1 bits (183), Expect = 6e-13
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = -1
Query: 552 GLTTKTFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAET 373
G T +TF RTVTNVG A S Y V + S KGV V VKP +L+FSE +K +Y VT + T
Sbjct: 658 GSTPQTFTRTVTNVGDAKSSYTVQIASP-KGVVVKVKPRKLIFSELKQKLTYQVTFSKRT 716
Query: 372 RFLKMGPSGAVFGSLTWTDGKHVVRSPIVV 283
K SG G L W K+ VRSPI V
Sbjct: 717 NSSK---SGVFEGFLKWNSNKYSVRSPIAV 743
>ref|NP_193895.1| subtilisin-like protease; protein id: At4g21640.1 [Arabidopsis
thaliana] gi|7435674|pir||T05839 subtilisin-like
proteinase homolog F17L22.100 - Arabidopsis thaliana
gi|4455272|emb|CAB36808.1| subtilisin-like protease
[Arabidopsis thaliana] gi|7268961|emb|CAB81271.1|
subtilisin-like protease [Arabidopsis thaliana]
Length = 769
Score = 74.7 bits (182), Expect = 7e-13
Identities = 42/85 (49%), Positives = 53/85 (61%)
Frame = -1
Query: 537 TFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAETRFLKM 358
T RTVTNVGP SVYR +ES + G+T+TV P+ LVF A K+ V+T + + +
Sbjct: 683 TLTRTVTNVGPIKSVYRAVIESPL-GITLTVNPTILVFKSAAKR---VLTFSVKAKTSHK 738
Query: 357 GPSGAVFGSLTWTDGKHVVRSPIVV 283
SG FGSLTWTDG H V P+ V
Sbjct: 739 VNSGYFFGSLTWTDGVHDVTIPVSV 763
>ref|NP_567632.1| subtilisin-like serine protease; protein id: At4g21630.1
[Arabidopsis thaliana] gi|7435671|pir||T05838
subtilisin-like proteinase homolog F17L22.90 -
Arabidopsis thaliana gi|4455271|emb|CAB36807.1| serine
protease-like protein [Arabidopsis thaliana]
gi|7268960|emb|CAB81270.1| serine protease-like protein
[Arabidopsis thaliana]
Length = 772
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = -1
Query: 537 TFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAETRFLKM 358
T RTVTNVGP SVY+ +ES + G+T+TV P+ LVF+ A K+ V+T + + +
Sbjct: 686 TLTRTVTNVGPIKSVYKAVIESPL-GITLTVNPTTLVFNSAAKR---VLTFSVKAKTSHK 741
Query: 357 GPSGAVFGSLTWTDGKHVVRSPIVV 283
SG FGSLTWTDG H V P+ V
Sbjct: 742 VNSGYFFGSLTWTDGVHDVIIPVSV 766
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,274,146
Number of Sequences: 1393205
Number of extensions: 12951922
Number of successful extensions: 174983
Number of sequences better than 10.0: 3740
Number of HSP's better than 10.0 without gapping: 78393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135377
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
