Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020475A_C01 KMC020475A_c01
(563 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A86427 probable serine/threonine kinase [imported] - Arabid... 119 3e-26
ref|NP_564353.1| serine/threonine kinase, putative; protein id: ... 119 3e-26
gb|AAK26845.1|AF339147_1 SOS2-like protein kinase PKS6 [Arabidop... 110 1e-23
pir||G86141 protein T25K16.13 [imported] - Arabidopsis thaliana ... 110 1e-23
gb|AAK16684.1|AF295664_1 CBL-interacting protein kinase 9 [Arabi... 110 1e-23
>pir||A86427 probable serine/threonine kinase [imported] - Arabidopsis thaliana
gi|12320856|gb|AAG50566.1|AC073506_8 serine/threonine
kinase, putative [Arabidopsis thaliana]
Length = 480
Score = 119 bits (297), Expect = 3e-26
Identities = 61/82 (74%), Positives = 69/82 (83%), Gaps = 1/82 (1%)
Frame = +2
Query: 320 RERKKMSSRSGNG-GSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVL 496
R S+ SG+ G RTRVGKYELGRTLGEG FAKVKFAR+V GD+VAIK++DKEKVL
Sbjct: 9 RSTPSRSTPSGSSSGGRTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVL 68
Query: 497 KHKMIGQIKREISTMKLIRHPN 562
K+KMI QIKREISTMKLI+HPN
Sbjct: 69 KNKMIAQIKREISTMKLIKHPN 90
>ref|NP_564353.1| serine/threonine kinase, putative; protein id: At1g30270.1,
supported by cDNA: gi_14486385, supported by cDNA:
gi_15912282, supported by cDNA: gi_19699233 [Arabidopsis
thaliana] gi|14486386|gb|AAK61494.1| CBL-interacting
protein kinase 23 [Arabidopsis thaliana]
gi|15912283|gb|AAL08275.1| At1g30270/F12P21_6
[Arabidopsis thaliana] gi|19699234|gb|AAL90983.1|
At1g30270/F12P21_6 [Arabidopsis thaliana]
Length = 482
Score = 119 bits (297), Expect = 3e-26
Identities = 61/82 (74%), Positives = 69/82 (83%), Gaps = 1/82 (1%)
Frame = +2
Query: 320 RERKKMSSRSGNG-GSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVL 496
R S+ SG+ G RTRVGKYELGRTLGEG FAKVKFAR+V GD+VAIK++DKEKVL
Sbjct: 9 RSTPSRSTPSGSSSGGRTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVL 68
Query: 497 KHKMIGQIKREISTMKLIRHPN 562
K+KMI QIKREISTMKLI+HPN
Sbjct: 69 KNKMIAQIKREISTMKLIKHPN 90
>gb|AAK26845.1|AF339147_1 SOS2-like protein kinase PKS6 [Arabidopsis thaliana]
Length = 451
Score = 110 bits (275), Expect = 1e-23
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +2
Query: 338 SSRSGNGGSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVLKHKMIGQ 517
S R SRTRVG YE+GRTLGEG+FAKVK+A++ TGD AIKILD+EKV +HKM+ Q
Sbjct: 4 SRRKATPASRTRVGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQ 63
Query: 518 IKREISTMKLIRHPN 562
+KREISTMKLI+HPN
Sbjct: 64 LKREISTMKLIKHPN 78
>pir||G86141 protein T25K16.13 [imported] - Arabidopsis thaliana
gi|6715641|gb|AAF26468.1|AC007323_9 T25K16.13
[Arabidopsis thaliana]
Length = 453
Score = 110 bits (275), Expect = 1e-23
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +2
Query: 338 SSRSGNGGSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVLKHKMIGQ 517
S R SRTRVG YE+GRTLGEG+FAKVK+A++ TGD AIKILD+EKV +HKM+ Q
Sbjct: 4 SRRKATPASRTRVGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQ 63
Query: 518 IKREISTMKLIRHPN 562
+KREISTMKLI+HPN
Sbjct: 64 LKREISTMKLIKHPN 78
>gb|AAK16684.1|AF295664_1 CBL-interacting protein kinase 9 [Arabidopsis thaliana]
Length = 449
Score = 110 bits (275), Expect = 1e-23
Identities = 52/75 (69%), Positives = 62/75 (82%)
Frame = +2
Query: 338 SSRSGNGGSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVLKHKMIGQ 517
S R SRTRVG YE+GRTLGEG+FAKVK+A++ TGD AIKILD+EKV +HKM+ Q
Sbjct: 4 SRRKATPASRTRVGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQ 63
Query: 518 IKREISTMKLIRHPN 562
+KREISTMKLI+HPN
Sbjct: 64 LKREISTMKLIKHPN 78
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 539,073,846
Number of Sequences: 1393205
Number of extensions: 12687170
Number of successful extensions: 44655
Number of sequences better than 10.0: 2318
Number of HSP's better than 10.0 without gapping: 41667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44185
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
