Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020465A_C01 KMC020465A_c01
(429 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN64473.1| putative ankyrin repeat containing protein [Oryza... 97 6e-20
ref|NP_172250.1| hypothetical protein; protein id: At1g07710.1 [... 95 2e-19
ref|NP_200815.1| ankyrin-like protein; protein id: At5g60070.1 [... 94 4e-19
ref|NP_180741.1| ankyrin-like protein; protein id: At2g31820.1 [... 78 3e-14
ref|NP_172055.1| unknown protein; protein id: At1g05640.1 [Arabi... 76 8e-14
>gb|AAN64473.1| putative ankyrin repeat containing protein [Oryza sativa (japonica
cultivar-group)]
Length = 565
Score = 96.7 bits (239), Expect = 6e-20
Identities = 49/81 (60%), Positives = 63/81 (77%)
Frame = -2
Query: 428 ACVSVSVTFLPSSCIVIGKDQRWLAMGVTIIGTTIMATTWGTMSYWVIRHRIEPSNVRTI 249
ACV VSV FL S +V+GK +RWLA+GVTI+G TI+ TT GTM YWVI HRIE +R+I
Sbjct: 474 ACVLVSVAFLALSFVVVGKAERWLAVGVTIMGATILVTTIGTMLYWVIAHRIEAKRMRSI 533
Query: 248 RKSPMGSSSRSFSASVLSDSE 186
++S + S SRSFSAS +S++E
Sbjct: 534 KRSSL-SRSRSFSASGMSEAE 553
>ref|NP_172250.1| hypothetical protein; protein id: At1g07710.1 [Arabidopsis
thaliana] gi|25406998|pir||C86212 hypothetical protein
[imported] - Arabidopsis thaliana
gi|8439897|gb|AAF75083.1|AC007583_19 It contains Ank
repeat PF|00023. EST gb|AI996003 comes from this gene.
[Arabidopsis thaliana]
Length = 543
Score = 95.1 bits (235), Expect = 2e-19
Identities = 44/85 (51%), Positives = 63/85 (73%)
Frame = -2
Query: 428 ACVSVSVTFLPSSCIVIGKDQRWLAMGVTIIGTTIMATTWGTMSYWVIRHRIEPSNVRTI 249
ACV +SV FL S +V+G++++WLA+ VT IG TIM TT GTM YW+I+H+IE +N+R I
Sbjct: 451 ACVLISVAFLALSFVVVGEEEKWLAIWVTAIGATIMITTLGTMCYWIIQHKIEAANLRNI 510
Query: 248 RKSPMGSSSRSFSASVLSDSELLTN 174
R+S + S S S+ L+DS++L N
Sbjct: 511 RRSSINSISGSWGIPQLTDSDILQN 535
>ref|NP_200815.1| ankyrin-like protein; protein id: At5g60070.1 [Arabidopsis
thaliana] gi|8777346|dbj|BAA96936.1| ankyrin-like
protein [Arabidopsis thaliana]
Length = 548
Score = 94.0 bits (232), Expect = 4e-19
Identities = 48/88 (54%), Positives = 61/88 (68%)
Frame = -2
Query: 428 ACVSVSVTFLPSSCIVIGKDQRWLAMGVTIIGTTIMATTWGTMSYWVIRHRIEPSNVRTI 249
ACV +SV FL + +V+G+++RWLA+GVT+ G TIM TT GTM YWVI HRIE SNVR
Sbjct: 462 ACVLISVAFLALAFVVVGEEERWLAVGVTVFGATIMLTTLGTMCYWVIMHRIEASNVRKS 521
Query: 248 RKSPMGSSSRSFSASVLSDSELLTNVMY 165
RK M +RS + +L S +LT MY
Sbjct: 522 RKESM---ARSRQSGLLEFSGILTKRMY 546
>ref|NP_180741.1| ankyrin-like protein; protein id: At2g31820.1 [Arabidopsis
thaliana] gi|25408188|pir||E84725 ankyrin-like protein
[imported] - Arabidopsis thaliana
gi|4887754|gb|AAD32290.1| ankyrin-like protein
[Arabidopsis thaliana]
Length = 662
Score = 77.8 bits (190), Expect = 3e-14
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = -2
Query: 428 ACVSVSVTFLPSSCIVIGKDQRWLAMGVTIIGTTIMATTWGTMSYWVIRHRIEPSNVRTI 249
AC+ +S+ F+ S IV+GK++ WLA+ T+IG TIM TT G M Y V+ HR+E S +R+I
Sbjct: 570 ACLFISIAFVSLSYIVVGKEEMWLAVCATVIGGTIMLTTIGAMCYCVVMHRMEESKLRSI 629
Query: 248 RKSPMGSSSRSFSASVL-SDSELL 180
RK S S+SFS S + SDS++L
Sbjct: 630 RKE--RSKSQSFSMSRMPSDSDIL 651
>ref|NP_172055.1| unknown protein; protein id: At1g05640.1 [Arabidopsis thaliana]
gi|25406852|pir||E86190 hypothetical protein [imported]
- Arabidopsis thaliana
gi|4836914|gb|AAD30616.1|AC007153_8 Hypothetical protein
[Arabidopsis thaliana]
Length = 627
Score = 76.3 bits (186), Expect = 8e-14
Identities = 43/84 (51%), Positives = 58/84 (68%), Gaps = 1/84 (1%)
Frame = -2
Query: 428 ACVSVSVTFLPSSCIVIGKDQRWLAMGVTIIGTTIMATTWGTMSYWVIRHRIEPSNVRTI 249
AC+ +SV F+ S IV+GK+ WLA+ TIIG TIM TT G M Y V+ HRIE S ++++
Sbjct: 535 ACLFISVAFVSLSFIVVGKEDIWLAICATIIGGTIMLTTIGAMCYCVVMHRIEESKLKSL 594
Query: 248 RKSPMGSSSRSFSASVL-SDSELL 180
RK S S+SFS S + S+SE+L
Sbjct: 595 RKE--RSKSKSFSLSHMPSESEIL 616
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,725,859
Number of Sequences: 1393205
Number of extensions: 6769110
Number of successful extensions: 20949
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 20422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20936
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 6822985368
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
