Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020434A_C01 KMC020434A_c01
(563 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187300.2| putative pyruvate dehydrogenase kinase; protein... 241 6e-63
pir||T51626 [pyruvate dehydrogenase (lipoamide)] kinase (EC 2.7.... 241 6e-63
gb|AAC97601.1| pyruvate dehydrogenase kinase [Arabidopsis thalia... 241 6e-63
gb|AAK01947.1| pyruvate dehydrogenase kinase 1 [Oryza sativa sub... 204 6e-52
gb|AAC63962.1| pyruvate dehydrogenase kinase isoform 2; PDK2 [Ze... 203 1e-51
>ref|NP_187300.2| putative pyruvate dehydrogenase kinase; protein id: At3g06483.1
[Arabidopsis thaliana]
Length = 369
Score = 241 bits (614), Expect = 6e-63
Identities = 117/153 (76%), Positives = 135/153 (87%)
Frame = +1
Query: 103 MAAKKACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIR 282
MA KKACE F K+L+EDVH+WGCMKQTGVSLRYMMEFGS PTE+NLLISAQFLHKEL IR
Sbjct: 1 MAVKKACEMFPKSLIEDVHKWGCMKQTGVSLRYMMEFGSKPTERNLLISAQFLHKELPIR 60
Query: 283 IARRAIELDSLPYGLSKKPAVIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVR 462
+ARRAIEL +LPYGLS KPAV+KVRDWY++SFRD+R++P+IK+ DEKDFT+MIKA+KVR
Sbjct: 61 VARRAIELQTLPYGLSDKPAVLKVRDWYLESFRDMRAFPEIKDSGDEKDFTQMIKAVKVR 120
Query: 463 HNNVVPTMALGVQQLKKGMDPKIVYEDLIEIHQ 561
HNNVVP MALGV QLKKGM+ +L EIHQ
Sbjct: 121 HNNVVPMMALGVNQLKKGMNS----GNLDEIHQ 149
>pir||T51626 [pyruvate dehydrogenase (lipoamide)] kinase (EC 2.7.1.99)
[validated] - Arabidopsis thaliana
gi|3641834|emb|CAA07447.1| pyruvate dehydrogenase kinase
[Arabidopsis thaliana]
Length = 366
Score = 241 bits (614), Expect = 6e-63
Identities = 117/153 (76%), Positives = 135/153 (87%)
Frame = +1
Query: 103 MAAKKACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIR 282
MA KKACE F K+L+EDVH+WGCMKQTGVSLRYMMEFGS PTE+NLLISAQFLHKEL IR
Sbjct: 1 MAVKKACEMFPKSLIEDVHKWGCMKQTGVSLRYMMEFGSKPTERNLLISAQFLHKELPIR 60
Query: 283 IARRAIELDSLPYGLSKKPAVIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVR 462
+ARRAIEL +LPYGLS KPAV+KVRDWY++SFRD+R++P+IK+ DEKDFT+MIKA+KVR
Sbjct: 61 VARRAIELQTLPYGLSDKPAVLKVRDWYLESFRDMRAFPEIKDSGDEKDFTQMIKAVKVR 120
Query: 463 HNNVVPTMALGVQQLKKGMDPKIVYEDLIEIHQ 561
HNNVVP MALGV QLKKGM+ +L EIHQ
Sbjct: 121 HNNVVPMMALGVNQLKKGMNS----GNLDEIHQ 149
>gb|AAC97601.1| pyruvate dehydrogenase kinase [Arabidopsis thaliana]
gi|14334688|gb|AAK59522.1| putative pyruvate
dehydrogenase kinase [Arabidopsis thaliana]
gi|16323390|gb|AAL15189.1| putative pyruvate
dehydrogenase kinase [Arabidopsis thaliana]
Length = 366
Score = 241 bits (614), Expect = 6e-63
Identities = 117/153 (76%), Positives = 135/153 (87%)
Frame = +1
Query: 103 MAAKKACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIR 282
MA KKACE F K+L+EDVH+WGCMKQTGVSLRYMMEFGS PTE+NLLISAQFLHKEL IR
Sbjct: 1 MAVKKACEMFPKSLIEDVHKWGCMKQTGVSLRYMMEFGSKPTERNLLISAQFLHKELPIR 60
Query: 283 IARRAIELDSLPYGLSKKPAVIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVR 462
+ARRAIEL +LPYGLS KPAV+KVRDWY++SFRD+R++P+IK+ DEKDFT+MIKA+KVR
Sbjct: 61 VARRAIELQTLPYGLSDKPAVLKVRDWYLESFRDMRAFPEIKDSGDEKDFTQMIKAVKVR 120
Query: 463 HNNVVPTMALGVQQLKKGMDPKIVYEDLIEIHQ 561
HNNVVP MALGV QLKKGM+ +L EIHQ
Sbjct: 121 HNNVVPMMALGVNQLKKGMNS----GNLDEIHQ 149
>gb|AAK01947.1| pyruvate dehydrogenase kinase 1 [Oryza sativa subsp. indica]
gi|23237829|dbj|BAC16404.1| pyruvate dehydrogenase
kinase 1 [Oryza sativa (japonica cultivar-group)]
Length = 363
Score = 204 bits (519), Expect = 6e-52
Identities = 97/131 (74%), Positives = 116/131 (88%)
Frame = +1
Query: 118 ACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIRIARRA 297
A E ++A+ E+V RWG MKQTGVSLRYMMEFGS PTE+NLL+SAQFL KEL IRIARRA
Sbjct: 2 ASEPVARAVAEEVGRWGSMKQTGVSLRYMMEFGSRPTERNLLLSAQFLQKELPIRIARRA 61
Query: 298 IELDSLPYGLSKKPAVIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVRHNNVV 477
+EL+SLP+GLS+KPA++KVRDWY+DSFRD+R +P+++N DE FT+MIK IKVRHNNVV
Sbjct: 62 LELESLPFGLSRKPAILKVRDWYLDSFRDIRYFPEVRNRNDELAFTQMIKMIKVRHNNVV 121
Query: 478 PTMALGVQQLK 510
PTMALGVQQLK
Sbjct: 122 PTMALGVQQLK 132
>gb|AAC63962.1| pyruvate dehydrogenase kinase isoform 2; PDK2 [Zea mays]
Length = 364
Score = 203 bits (517), Expect = 1e-51
Identities = 97/143 (67%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Frame = +1
Query: 118 ACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIRIARRA 297
A E ++A+ E+V RWG MKQTGV+LRYMMEFGS PT++NLL+SAQFLHKEL IR ARRA
Sbjct: 2 ASEPVARAVAEEVGRWGSMKQTGVTLRYMMEFGSRPTQRNLLLSAQFLHKELPIRFARRA 61
Query: 298 IELDSLPYGLSKKPAVIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVRHNNVV 477
+ELDSLP+GLS KPA++KVRDWY+DSFRD+R +P++++ DE FT+MI +KVRHNNVV
Sbjct: 62 LELDSLPFGLSNKPAILKVRDWYLDSFRDIRYFPEVRSRNDELAFTQMINMVKVRHNNVV 121
Query: 478 PTMALGVQQLKK--GMDPKIVYE 540
PTMALGVQQLKK G K+ +E
Sbjct: 122 PTMALGVQQLKKELGRSRKVPFE 144
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,556,795
Number of Sequences: 1393205
Number of extensions: 9927504
Number of successful extensions: 51220
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 35616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46714
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
